RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 ORC6Q9Y5N6 252 aa7.45□□□□□ -1.22
CDK5RAP3-211ENST00000578996 DAPL1A0PJW8 107 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 TMEM82A0PJX8 343 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ODF3BA8MYP8 253 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 SIRPB1O00241 398 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 FBXO24O75426 580 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 JUNBP17275 347 aaPredicted RBP7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 AZGP1P25311 298 aaKnown RBP7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 MTCP1P56278 107 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ZNF85Q03923 595 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 TMEM244Q5VVB8 128 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ZNF626Q68DY1 528 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 CCBE1Q6UXH8 406 aaPredicted RBP7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 TCF23Q7RTU1 214 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 Q8IYB0 196 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ENTHD1Q8IYW4 607 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 FAM58AQ8N1B3 248 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 DTX3Q8N9I9 347 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 CCDC54Q8NEL0 328 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 OR52N4Q8NGI2 321 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 OR5D18Q8NGL1 313 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 PYDC1Q8WXC3 89 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 PP6455Q8WZ26 134 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 FGGYQ96C11 551 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 C10orf35Q96D05 121 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 MALSU1Q96EH3 234 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 RNFT2Q96EX2 444 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ADAT3Q96EY9 351 aaPredicted RBP7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 OSBPL10Q9BXB5 764 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ZNF702PQ9H963 129 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 NEK6Q9HC98 313 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ING3Q9NXR8 418 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 GLS2Q9UI32 602 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 PITPNC1Q9UKF7 332 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 GSTK1Q9Y2Q3 226 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 VWFP04275 2813 aa7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 TET2Q6N021 2002 aaPredicted RBP7.44□□□□□ -1.22
CDK5RAP3-211ENST00000578996 IGHV2-26A0A0B4J1V2 119 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 IGKV1-9A0A0C4DH69 117 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 A0A0G2JK05 382 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 TRBV2A0A0J9YWF9 115 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 FAM172BPA6NC97 362 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 A6NDX4 124 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 FAM90A8PA6NJQ4 464 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 VGLL3A8MV65 326 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 J3QLW9 94 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 PSPNO60542 156 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ENTPD6O75354 484 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 RBP4P02753 201 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 PRB2P02812 416 aaPredicted RBP7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 OPN1MWP04001 364 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 HTR1AP08908 422 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 OPN1MW2P0DN77 364 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 OPN1MW3P0DN78 364 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 CD28P10747 220 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ZNF19P17023 458 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ATF1P18846 271 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 PRKACBP22694 351 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ZNF91Q05481 1191 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 MEF2CQ06413 473 aaPredicted RBP7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 SCN1BQ07699 218 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 TMED1Q13445 227 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ZIK1Q3SY52 487 aaPredicted RBP7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 LDLRAD2Q5SZI1 272 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 LHFPL2Q6ZUX7 228 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 OR4S1Q8NGB4 309 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 OR11H6Q8NGC7 330 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 OR13C3Q8NGS6 347 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 OR2G2Q8NGZ5 317 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 OPALINQ96PE5 141 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 SPACA5Q96QH8 159 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 CDCA4Q9BXL8 241 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 CLEC7AQ9BXN2 247 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 PRSS22Q9GZN4 317 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 EXOSC4Q9NPD3 245 aaKnown RBP7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 FRRS1LQ9P0K9 344 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 RRP15Q9Y3B9 282 aaKnown RBP7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 LINC00312Q9Y6C7 94 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 SESN1Q9Y6P5 492 aa7.43□□□□□ -1.22
CDK5RAP3-211ENST00000578996 MEGF11A6BM72 1044 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 EI24O14681 340 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 SH2D1BO14796 132 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 MGST3O14880 152 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 SLC16A6O15403 523 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 OR2H2O95918 312 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ZNF44P15621 663 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 VDAC2P45880 294 aaPredicted RBP7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 OR3A1P47881 315 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 P2RX3P56373 397 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 NANOS3P60323 173 aaKnown RBP7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 ISL1P61371 349 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 TMEM95Q3KNT9 176 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 SPIN3Q5JUX0 258 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 MINOS1Q5TGZ0 78 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 PRAMEF5Q5TYX0 476 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 BAIAP2L2Q6UXY1 529 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 DNAAF1Q8NEP3 725 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 OR51A4Q8NGJ6 313 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 OR13C9Q8NGT0 318 aa7.42□□□□□ -1.22
CDK5RAP3-211ENST00000578996 OR10AC1Q8NH08 325 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms