RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 NOX4Q9NPH5 578 aa3.14□□□□□ -1.91
SMARCE1-215ENST00000578995 UFSP2Q9NUQ7 469 aa3.14□□□□□ -1.91
SMARCE1-215ENST00000578995 C14orf119Q9NWQ9 140 aa3.14□□□□□ -1.91
SMARCE1-215ENST00000578995 IL36GQ9NZH8 169 aa3.14□□□□□ -1.91
SMARCE1-215ENST00000578995 RNF7Q9UBF6 113 aa3.14□□□□□ -1.91
SMARCE1-215ENST00000578995 KAAG1Q9UBP8 84 aa3.14□□□□□ -1.91
SMARCE1-215ENST00000578995 FBLN5Q9UBX5 448 aa3.14□□□□□ -1.91
SMARCE1-215ENST00000578995 FOXJ3Q9UPW0 622 aa3.14□□□□□ -1.91
SMARCE1-215ENST00000578995 DHDHQ9UQ10 334 aa3.14□□□□□ -1.91
SMARCE1-215ENST00000578995 NOP16Q9Y3C1 178 aaKnown RBP3.14□□□□□ -1.91
SMARCE1-215ENST00000578995 MAB21L2Q9Y586 359 aa3.14□□□□□ -1.91
SMARCE1-215ENST00000578995 NPTNQ9Y639 398 aa3.14□□□□□ -1.91
SMARCE1-215ENST00000578995 NIPBLQ6KC79 2804 aaeCLIP3.14□□□□□ -1.91
SMARCE1-215ENST00000578995 HIVEP2P31629 2446 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 PPIAL4EA0A075B759 164 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 IGHV3OR15-7A0A075B7D8 119 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 A0A087WXM4 84 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 A0A0A6YYD4 124 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 TRAV1-2A0A0B4J238 106 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 A0A1W2PP11 408 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 OOEPA6NGQ2 149 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 ANXA2P2A6NMY6 339 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 C22orf46C9J442 243 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 PPIAL4DF5H284 164 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 TRAPPC2LH3BP13 241 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 CCRL2O00421 344 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 SLC22A1O15245 554 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 AKR7A2O43488 359 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 SPRY1O43609 319 aaPredicted RBP3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 ANGPTL7O43827 346 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 GABARAPO95166 117 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 BPNT1O95861 308 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 GRPP07492 148 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 RPSAP08865 295 aaKnown RBP3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 PPIAL4FP0DN26 164 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 PSG2P11465 335 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 BCL3P20749 454 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 USF1P22415 310 aaPredicted RBP3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 PRKACBP22694 351 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 TNFSF4P23510 183 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 EEF1B2P24534 225 aaKnown RBP3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 PSMA1P25786 263 aaKnown RBP3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 GNALP38405 381 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 MDH2P40926 338 aaKnown RBP3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 GPR6P46095 362 aaPredicted RBP3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 HAAOP46952 286 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 CEBPDP49716 269 aaPredicted RBP3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 RBP2P50120 134 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 PLA2G7Q13093 441 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 PDZK1IP1Q13113 114 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 UNC119Q13432 240 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 ZNF146Q15072 292 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 CNN3Q15417 329 aaKnown RBP3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 NEDD8Q15843 81 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 CTF1Q16619 201 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 DGUOKQ16854 277 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 HFEQ30201 348 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 NHLRC3Q5JS37 347 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 SIGIRRQ6IA17 410 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 Q6P435 159 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 C17orf107Q6ZR85 190 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 DCDC5Q6ZRR9 648 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 LHFPL2Q6ZUX7 228 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 SLC25A26Q70HW3 274 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 CEACAM19Q7Z692 300 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 CDH26Q8IXH8 852 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 FTMTQ8N4E7 242 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 C11orf42Q8N5U0 333 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 MS4A15Q8N5U1 240 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 FAM216BQ8N7L0 139 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 ZSCAN4Q8NAM6 433 aaPredicted RBP3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 LY6G5BQ8NDX9 201 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 PXT1Q8NFP0 134 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 OR51T1Q8NGJ9 327 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 OR8S1Q8NH09 359 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 C8orf46Q8TAG6 207 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 TSEN15Q8WW01 171 aaKnown RBP3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 CCL17Q92583 94 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 TMEM203Q969S6 136 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 SLAMF9Q96A28 289 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 RFT1Q96AA3 541 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 C12orf43Q96C57 262 aaKnown RBP3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 MSI2Q96DH6 328 aaKnown RBP3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 SDSLQ96GA7 329 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 C18orf12Q96KH6 178 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 MYCBPQ99417 103 aaPredicted RBP3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 PIMREGQ9BSJ6 248 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 CENPOQ9BU64 300 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 CCDC90BQ9GZT6 254 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 EGLN1Q9GZT9 426 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 NAA50Q9GZZ1 169 aaKnown RBP3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 SHARPINQ9H0F6 387 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 DNTTIP1Q9H147 329 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 KCNK15Q9H427 330 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 ZNF665Q9H7R5 613 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 FN3KRPQ9HA64 309 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 PLEKHA1Q9HB21 404 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 HMG20AQ9NP66 347 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 TMEM138Q9NPI0 162 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 DECR2Q9NUI1 292 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms