RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 KITLGP21583 273 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 S100GP29377 79 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 CASP6P55212 293 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 SEC61A1P61619 476 aaKnown RBP9.53□□□□□ -0.88
SKA2-204ENST00000578519 DHODHQ02127 395 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 FOXF2Q12947 444 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 IKZF1Q13422 519 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 PIGYQ3MUY2 71 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 ZNF324BQ6AW86 544 aaPredicted RBP9.53□□□□□ -0.88
SKA2-204ENST00000578519 DHRS11Q6UWP2 260 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 GSG1LQ6UXU4 331 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 GFRALQ6UXV0 394 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 LHFPL1Q86WI0 220 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 SGPP2Q8IWX5 399 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 CCDC71LQ8N9Z2 235 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 NAXEQ8NCW5 288 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 BHLHE23Q8NDY6 225 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 OR52B4Q8NGK2 314 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 OR13G1Q8NGZ3 307 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 EXTL1Q92935 676 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 SULT4A1Q9BR01 284 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 ZNF2Q9BSG1 426 aaPredicted RBP9.53□□□□□ -0.88
SKA2-204ENST00000578519 ADAT1Q9BUB4 502 aaKnown RBP9.53□□□□□ -0.88
SKA2-204ENST00000578519 OR51B6Q9H340 312 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 IFT22Q9H7X7 185 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 ZNF629Q9UEG4 869 aaPredicted RBP9.53□□□□□ -0.88
SKA2-204ENST00000578519 SLC23A1Q9UHI7 598 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 PURGQ9UJV8 347 aaKnown RBP9.53□□□□□ -0.88
SKA2-204ENST00000578519 WASF3Q9UPY6 502 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 OSGIN2Q9Y236 505 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 MEMO1Q9Y316 297 aa9.53□□□□□ -0.88
SKA2-204ENST00000578519 OR2AT4A6NND4 320 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 SH2D1BO14796 132 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 DEGS1O15121 323 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 IFNA7P01567 189 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 PDGFAP04085 211 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 NFYAP23511 347 aaPredicted RBP9.52□□□□□ -0.89
SKA2-204ENST00000578519 RBMXP38159 391 aaKnown RBP9.52□□□□□ -0.89
SKA2-204ENST00000578519 NPY4RP50391 375 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 UCP3P55916 312 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 PRSS12P56730 875 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 HERV-K104P61576 105 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 SRSF4Q08170 494 aaKnown RBP9.52□□□□□ -0.89
SKA2-204ENST00000578519 PPP1R1AQ13522 171 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 ABCA11PQ4W5N1 156 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 FAM76BQ5HYJ3 339 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 SPATA46Q5T0L3 261 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 MBNL2Q5VZF2 373 aaKnown RBP9.52□□□□□ -0.89
SKA2-204ENST00000578519 SIGIRRQ6IA17 410 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 RGS7BPQ6MZT1 257 aaPredicted RBP9.52□□□□□ -0.89
SKA2-204ENST00000578519 MOB1BQ7L9L4 216 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 CNTRLQ7Z7A1 2325 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 MRGPRGQ86SM5 289 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 FAM185AQ8N0U4 392 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 C9orf62Q8N4C0 152 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 OR5M8Q8NGP6 311 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 KLF14Q8TD94 323 aaPredicted RBP9.52□□□□□ -0.89
SKA2-204ENST00000578519 TTC28Q96AY4 2481 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 PIK3IP1Q96FE7 263 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 MARS2Q96GW9 593 aaKnown RBP9.52□□□□□ -0.89
SKA2-204ENST00000578519 FAM210AQ96ND0 272 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 RAB18Q9NP72 206 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 C1orf123Q9NWV4 160 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 TREM2Q9NZC2 230 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 OPN4Q9UHM6 478 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 ZNF230Q9UIE0 474 aaPredicted RBP9.52□□□□□ -0.89
SKA2-204ENST00000578519 SLC25A15Q9Y619 301 aa9.52□□□□□ -0.89
SKA2-204ENST00000578519 TRBV6-6A0A0A6YYG2 114 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 TEX13DA0A0J9YY54 714 aaPredicted RBP9.51□□□□□ -0.89
SKA2-204ENST00000578519 A0A1W2PR80 420 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 RFPL4AA6NLU0 287 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 RFPL4AL1F8VTS6 287 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 SMLR1H3BR10 107 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 M0R233 179 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 SDCBPO00560 298 aaPredicted RBP9.51□□□□□ -0.89
SKA2-204ENST00000578519 AGFG2O95081 481 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 IFNA21P01568 189 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 TK1P04183 234 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 CELA3BP08861 270 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 CECR9P0C854 216 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 ZNF728P0DKX0 622 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 SPINK2P20155 84 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 S100A1P23297 94 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 CALCRP30988 508 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 NUP62P37198 522 aaPredicted RBP9.51□□□□□ -0.89
SKA2-204ENST00000578519 NPBWR2P48146 333 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 IFITM2Q01629 132 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 PSG7Q13046 419 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 SPIN3Q5JUX0 258 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 SLC22A25Q6T423 547 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 SEM1Q6ZVN7 128 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 SLC38A6Q8IZM9 456 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 CISD2Q8N5K1 135 aaKnown RBP9.51□□□□□ -0.89
SKA2-204ENST00000578519 THAP6Q8TBB0 222 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 CASTOR1Q8WTX7 329 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 CCDC120Q96HB5 630 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 MTCH1Q9NZJ7 389 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 PIPOXQ9P0Z9 390 aa9.51□□□□□ -0.89
SKA2-204ENST00000578519 RCC2Q9P258 522 aaKnown RBP9.51□□□□□ -0.89
SKA2-204ENST00000578519 FAM215AQ9Y5M1 114 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms