RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501		Q6YL49	198 aa		11.19	□□□□□ -0.62
CSNK1D-208	ENST00000578501	STX19	Q8N4C7	294 aa		11.19	□□□□□ -0.62
CSNK1D-208	ENST00000578501	OR5D13	Q8NGL4	314 aa		11.19	□□□□□ -0.62
CSNK1D-208	ENST00000578501	EMG1	Q92979	244 aa	Known RBP	11.19	□□□□□ -0.62
CSNK1D-208	ENST00000578501	ZDHHC16	Q969W1	377 aa		11.19	□□□□□ -0.62
CSNK1D-208	ENST00000578501	SLC25A28	Q96A46	364 aa		11.19	□□□□□ -0.62
CSNK1D-208	ENST00000578501	CPNE2	Q96FN4	548 aa	Predicted RBP	11.19	□□□□□ -0.62
CSNK1D-208	ENST00000578501	C19orf12	Q9NSK7	152 aa		11.19	□□□□□ -0.62
CSNK1D-208	ENST00000578501	RBFOX1	Q9NWB1	397 aa	Known RBP	11.19	□□□□□ -0.62
CSNK1D-208	ENST00000578501	GLS2	Q9UI32	602 aa		11.19	□□□□□ -0.62
CSNK1D-208	ENST00000578501	ZNF281	Q9Y2X9	895 aa		11.19	□□□□□ -0.62
CSNK1D-208	ENST00000578501	SIRT4	Q9Y6E7	314 aa	Predicted RBP	11.19	□□□□□ -0.62
CSNK1D-208	ENST00000578501	RNASEK-C17orf49	H0YIS7	233 aa		11.18	□□□□□ -0.62
CSNK1D-208	ENST00000578501	HAND1	O96004	215 aa		11.18	□□□□□ -0.62
CSNK1D-208	ENST00000578501	HCK	P08631	526 aa		11.18	□□□□□ -0.62
CSNK1D-208	ENST00000578501	RAB3A	P20336	220 aa		11.18	□□□□□ -0.62
CSNK1D-208	ENST00000578501	UBE2E1	P51965	193 aa		11.18	□□□□□ -0.62
CSNK1D-208	ENST00000578501	AQP4	P55087	323 aa		11.18	□□□□□ -0.62
CSNK1D-208	ENST00000578501	TAS2R43	P59537	309 aa		11.18	□□□□□ -0.62
CSNK1D-208	ENST00000578501	ZP1	P60852	638 aa		11.18	□□□□□ -0.62
CSNK1D-208	ENST00000578501	YIF1B	Q5BJH7	314 aa		11.18	□□□□□ -0.62
CSNK1D-208	ENST00000578501	TMEM200B	Q69YZ2	307 aa		11.18	□□□□□ -0.62
CSNK1D-208	ENST00000578501	FAM185A	Q8N0U4	392 aa		11.18	□□□□□ -0.62
CSNK1D-208	ENST00000578501	OR8H2	Q8N162	312 aa		11.18	□□□□□ -0.62
CSNK1D-208	ENST00000578501	PIP4P2	Q8N4L2	257 aa		11.18	□□□□□ -0.62
CSNK1D-208	ENST00000578501	TMEM86B	Q8N661	226 aa		11.18	□□□□□ -0.62
CSNK1D-208	ENST00000578501	BPIFB6	Q8NFQ5	453 aa		11.18	□□□□□ -0.62
CSNK1D-208	ENST00000578501	GHSR	Q92847	366 aa		11.18	□□□□□ -0.62
CSNK1D-208	ENST00000578501	SNX22	Q96L94	193 aa		11.18	□□□□□ -0.62
CSNK1D-208	ENST00000578501	SPACA5	Q96QH8	159 aa		11.18	□□□□□ -0.62
CSNK1D-208	ENST00000578501	VCX3B	Q9H321	246 aa		11.18	□□□□□ -0.62
CSNK1D-208	ENST00000578501	ZNF696	Q9H7X3	374 aa		11.18	□□□□□ -0.62
CSNK1D-208	ENST00000578501	HMG20A	Q9NP66	347 aa		11.18	□□□□□ -0.62
CSNK1D-208	ENST00000578501	SIRT7	Q9NRC8	400 aa		11.18	□□□□□ -0.62
CSNK1D-208	ENST00000578501	IGKV1-12	A0A0C4DH73	117 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	MDFIC2	A0A1B0GVS7	189 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	hCG_1809904	A0A1W2PP81	198 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501		A0A1W2PPE2	198 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501		A0A1W2PR64	198 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501		A0A1W2PRV1	198 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	MAGEB3	O15480	346 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	ANGPTL7	O43827	346 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	LALBA	P00709	142 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	IGKV1D-12	P01611	117 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	ALDOB	P05062	364 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	CD1A	P06126	327 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	EEF1B2	P24534	225 aa	Known RBP	11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	C21orf33	P30042	268 aa	Predicted RBP	11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	SOX2	P48431	317 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	BMX	P51813	675 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	ACSM1	Q08AH1	577 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	C6orf141	Q5SZD1	244 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	ASPHD2	Q6ICH7	369 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	C17orf107	Q6ZR85	190 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	AHSA2	Q719I0	299 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	C11orf42	Q8N5U0	333 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	NANOGP1	Q8N7R0	232 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	ASCC1	Q8N9N2	400 aa	Known RBP	11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	PXT1	Q8NFP0	134 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	TMEM106A	Q96A25	262 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	RFT1	Q96AA3	541 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	PGLYRP3	Q96LB9	341 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	POMT1	Q9Y6A1	747 aa		11.17	□□□□□ -0.62
CSNK1D-208	ENST00000578501	TRBV5-5	A0A0J9YX44	114 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	TMEM82	A0PJX8	343 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	SH2D1B	O14796	132 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	HOXA3	O43365	443 aa	Predicted RBP	11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	INMT	O95050	263 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	RBP4	P02753	201 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	CDK1	P06493	297 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	MELTF	P08582	738 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	TMEM225B	P0DP42	221 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	HKR1	P10072	659 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	PRKACA	P17612	351 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	LMO1	P25800	156 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	WNT4	P56705	351 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	RPS11	P62280	158 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	DEFA6	Q01524	100 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	MEF2C	Q06413	473 aa	Predicted RBP	11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	ELP2	Q6IA86	826 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	C16orf87	Q6PH81	154 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	GDPD3	Q7L5L3	318 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	RNF144B	Q7Z419	303 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	LDLRAD3	Q86YD5	345 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	OR4M1	Q8NGD0	313 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	OR51A2	Q8NGJ7	313 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	OR5D18	Q8NGL1	313 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	PPP1R35	Q8TAP8	253 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	SSMEM1	Q8WWF3	244 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	MYDGF	Q969H8	173 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	DUX5	Q96PT3	197 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	TMEM138	Q9NPI0	162 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	TAS2R4	Q9NYW5	299 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	IL36RN	Q9UBH0	155 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	ERGIC3	Q9Y282	383 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	SF3B6	Q9Y3B4	125 aa	Known RBP	11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501	PCDHGB5	Q9Y5G0	923 aa		11.16	□□□□□ -0.62
CSNK1D-208	ENST00000578501		A0A0U1RQK1	487 aa		11.15	□□□□□ -0.62
CSNK1D-208	ENST00000578501		H0YHG0	523 aa		11.15	□□□□□ -0.62
CSNK1D-208	ENST00000578501	MYL12B	O14950	172 aa		11.15	□□□□□ -0.62

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