RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 TMEM225BP0DP42 221 aa19.31■□□□□ 0.68
SNF8-217ENST00000576353 PRKACAP17612 351 aa19.31■□□□□ 0.68
SNF8-217ENST00000576353 MYF6P23409 242 aa19.31■□□□□ 0.68
SNF8-217ENST00000576353 UBA52P62987 128 aaKnown RBP19.31■□□□□ 0.68
SNF8-217ENST00000576353 PPP3R1P63098 170 aa19.31■□□□□ 0.68
SNF8-217ENST00000576353 GUCA2AQ02747 115 aa19.31■□□□□ 0.68
SNF8-217ENST00000576353 ZNF146Q15072 292 aa19.31■□□□□ 0.68
SNF8-217ENST00000576353 RNLSQ5VYX0 342 aa19.31■□□□□ 0.68
SNF8-217ENST00000576353 RUSC1-AS1Q66K80 236 aa19.31■□□□□ 0.68
SNF8-217ENST00000576353 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.31■□□□□ 0.68
SNF8-217ENST00000576353 ZDHHC16Q969W1 377 aa19.31■□□□□ 0.68
SNF8-217ENST00000576353 ANKRD60Q9BZ19 345 aa19.31■□□□□ 0.68
SNF8-217ENST00000576353 HMG20AQ9NP66 347 aa19.31■□□□□ 0.68
SNF8-217ENST00000576353 SIRT7Q9NRC8 400 aa19.31■□□□□ 0.68
SNF8-217ENST00000576353 C19orf12Q9NSK7 152 aa19.31■□□□□ 0.68
SNF8-217ENST00000576353 TAS2R4Q9NYW5 299 aa19.31■□□□□ 0.68
SNF8-217ENST00000576353 PCDHGB5Q9Y5G0 923 aa19.31■□□□□ 0.68
SNF8-217ENST00000576353 SOX21Q9Y651 276 aaPredicted RBP19.31■□□□□ 0.68
SNF8-217ENST00000576353 IGKV1-12A0A0C4DH73 117 aa19.3■□□□□ 0.68
SNF8-217ENST00000576353 ZNF737O75373 536 aa19.3■□□□□ 0.68
SNF8-217ENST00000576353 IGKV1D-12P01611 117 aa19.3■□□□□ 0.68
SNF8-217ENST00000576353 PRTN3P24158 256 aa19.3■□□□□ 0.68
SNF8-217ENST00000576353 DEFB112Q30KQ8 113 aa19.3■□□□□ 0.68
SNF8-217ENST00000576353 NCR3LG1Q68D85 454 aa19.3■□□□□ 0.68
SNF8-217ENST00000576353 TMEM200BQ69YZ2 307 aa19.3■□□□□ 0.68
SNF8-217ENST00000576353 IZUMO2Q6UXV1 221 aa19.3■□□□□ 0.68
SNF8-217ENST00000576353 RNF144BQ7Z419 303 aa19.3■□□□□ 0.68
SNF8-217ENST00000576353 ZFP41Q8N8Y5 198 aa19.3■□□□□ 0.68
SNF8-217ENST00000576353 SNX22Q96L94 193 aa19.3■□□□□ 0.68
SNF8-217ENST00000576353 GPER1Q99527 375 aa19.3■□□□□ 0.68
SNF8-217ENST00000576353 CDCA4Q9BXL8 241 aa19.3■□□□□ 0.68
SNF8-217ENST00000576353 PRDM13Q9H4Q3 707 aa19.3■□□□□ 0.68
SNF8-217ENST00000576353 UNKLQ9H9P5 680 aaKnown RBP19.3■□□□□ 0.68
SNF8-217ENST00000576353 NOX4Q9NPH5 578 aa19.3■□□□□ 0.68
SNF8-217ENST00000576353 TPRKBQ9Y3C4 175 aa19.3■□□□□ 0.68
SNF8-217ENST00000576353 TRBV5-5A0A0J9YX44 114 aa19.29■□□□□ 0.68
SNF8-217ENST00000576353 DNAJC9-AS1A6NH13 148 aa19.29■□□□□ 0.68
SNF8-217ENST00000576353 ALDOBP05062 364 aa19.29■□□□□ 0.68
SNF8-217ENST00000576353 EEF1B2P24534 225 aaKnown RBP19.29■□□□□ 0.68
SNF8-217ENST00000576353 ZP1P60852 638 aa19.29■□□□□ 0.68
SNF8-217ENST00000576353 Q499Y3 187 aa19.29■□□□□ 0.68
SNF8-217ENST00000576353 CRIP3Q6Q6R5 217 aa19.29■□□□□ 0.68
SNF8-217ENST00000576353 GDPD3Q7L5L3 318 aa19.29■□□□□ 0.68
SNF8-217ENST00000576353 SATL1Q86VE3 508 aa19.29■□□□□ 0.68
SNF8-217ENST00000576353 PDZD9Q8IXQ8 264 aa19.29■□□□□ 0.68
SNF8-217ENST00000576353 OR4M1Q8NGD0 313 aa19.29■□□□□ 0.68
SNF8-217ENST00000576353 OR51A2Q8NGJ7 313 aa19.29■□□□□ 0.68
SNF8-217ENST00000576353 PGLYRP3Q96LB9 341 aa19.29■□□□□ 0.68
SNF8-217ENST00000576353 MND1Q9BWT6 205 aa19.29■□□□□ 0.68
SNF8-217ENST00000576353 TMEM138Q9NPI0 162 aa19.29■□□□□ 0.68
SNF8-217ENST00000576353 IL36RNQ9UBH0 155 aa19.29■□□□□ 0.68
SNF8-217ENST00000576353 hCG_1809904A0A1W2PP81 198 aa19.28■□□□□ 0.68
SNF8-217ENST00000576353 A0A1W2PPE2 198 aa19.28■□□□□ 0.68
SNF8-217ENST00000576353 A0A1W2PR64 198 aa19.28■□□□□ 0.68
SNF8-217ENST00000576353 A0A1W2PRV1 198 aa19.28■□□□□ 0.68
SNF8-217ENST00000576353 CLDN34H7C241 214 aa19.28■□□□□ 0.68
SNF8-217ENST00000576353 SH2D1BO14796 132 aa19.28■□□□□ 0.68
SNF8-217ENST00000576353 ATP6V1G2O95670 118 aa19.28■□□□□ 0.68
SNF8-217ENST00000576353 CD1AP06126 327 aa19.28■□□□□ 0.68
SNF8-217ENST00000576353 DUSP1P28562 367 aa19.28■□□□□ 0.68
SNF8-217ENST00000576353 BDH1Q02338 343 aa19.28■□□□□ 0.68
SNF8-217ENST00000576353 ASPHD2Q6ICH7 369 aa19.28■□□□□ 0.68
SNF8-217ENST00000576353 OR8H2Q8N162 312 aa19.28■□□□□ 0.68
SNF8-217ENST00000576353 OR13C5Q8NGS8 318 aa19.28■□□□□ 0.68
SNF8-217ENST00000576353 PPP1R35Q8TAP8 253 aa19.28■□□□□ 0.68
SNF8-217ENST00000576353 CKLFQ9UBR5 152 aa19.28■□□□□ 0.68
SNF8-217ENST00000576353 GSTK1Q9Y2Q3 226 aa19.28■□□□□ 0.68
SNF8-217ENST00000576353 TMEM82A0PJX8 343 aa19.27■□□□□ 0.68
SNF8-217ENST00000576353 CALCBP10092 127 aa19.27■□□□□ 0.68
SNF8-217ENST00000576353 CELP19835 753 aa19.27■□□□□ 0.68
SNF8-217ENST00000576353 GABRR1P24046 479 aa19.27■□□□□ 0.68
SNF8-217ENST00000576353 BMXP51813 675 aa19.27■□□□□ 0.68
SNF8-217ENST00000576353 SNU13P55769 128 aaKnown RBP19.27■□□□□ 0.68
SNF8-217ENST00000576353 RPS11P62280 158 aaKnown RBP eCLIP19.27■□□□□ 0.68
SNF8-217ENST00000576353 ACTG1P63261 375 aa19.27■□□□□ 0.68
SNF8-217ENST00000576353 C17orf107Q6ZR85 190 aa19.27■□□□□ 0.68
SNF8-217ENST00000576353 PXT1Q8NFP0 134 aa19.27■□□□□ 0.68
SNF8-217ENST00000576353 OR52N4Q8NGI2 321 aa19.27■□□□□ 0.68
SNF8-217ENST00000576353 TNFRSF14Q92956 283 aa19.27■□□□□ 0.68
SNF8-217ENST00000576353 SLC25A28Q96A46 364 aa19.27■□□□□ 0.68
SNF8-217ENST00000576353 EXOSC4Q9NPD3 245 aaKnown RBP19.27■□□□□ 0.68
SNF8-217ENST00000576353 PNMA8CA0A1B0GUJ8 204 aa19.26■□□□□ 0.67
SNF8-217ENST00000576353 MDFIC2A0A1B0GVS7 189 aa19.26■□□□□ 0.67
SNF8-217ENST00000576353 RNASEK-C17orf49H0YIS7 233 aa19.26■□□□□ 0.67
SNF8-217ENST00000576353 GPX5O75715 221 aa19.26■□□□□ 0.67
SNF8-217ENST00000576353 UBE2E1P51965 193 aa19.26■□□□□ 0.67
SNF8-217ENST00000576353 EDDM3BP56851 147 aa19.26■□□□□ 0.67
SNF8-217ENST00000576353 SLC35A2P78381 396 aa19.26■□□□□ 0.67
SNF8-217ENST00000576353 ACSM1Q08AH1 577 aa19.26■□□□□ 0.67
SNF8-217ENST00000576353 SLC9A3R2Q15599 337 aa19.26■□□□□ 0.67
SNF8-217ENST00000576353 Q6YL49 198 aa19.26■□□□□ 0.67
SNF8-217ENST00000576353 TNFAIP8L1Q8WVP5 186 aa19.26■□□□□ 0.67
SNF8-217ENST00000576353 C1orf147Q96MC9 270 aaPredicted RBP19.26■□□□□ 0.67
SNF8-217ENST00000576353 DUX5Q96PT3 197 aa19.26■□□□□ 0.67
SNF8-217ENST00000576353 FAM96BQ9Y3D0 163 aa19.26■□□□□ 0.67
SNF8-217ENST00000576353 STAB1Q9NY15 2570 aa19.26■□□□□ 0.67
SNF8-217ENST00000576353 GABRPO00591 440 aa19.25■□□□□ 0.67
SNF8-217ENST00000576353 BDKRB2P30411 391 aa19.25■□□□□ 0.67
SNF8-217ENST00000576353 MTNR1BP49286 362 aa19.25■□□□□ 0.67
SNF8-217ENST00000576353 MEF2CQ06413 473 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms