RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 ECI1P42126 302 aa7.12□□□□□ -1.27
SMG6-218ENST00000575454 RIDAP52758 137 aaKnown RBP7.12□□□□□ -1.27
SMG6-218ENST00000575454 P2RX3P56373 397 aa7.12□□□□□ -1.27
SMG6-218ENST00000575454 RAB25P57735 213 aa7.12□□□□□ -1.27
SMG6-218ENST00000575454 CDC42P60953 191 aa7.12□□□□□ -1.27
SMG6-218ENST00000575454 RPS7P62081 194 aaKnown RBP7.12□□□□□ -1.27
SMG6-218ENST00000575454 ROM1Q03395 351 aa7.12□□□□□ -1.27
SMG6-218ENST00000575454 TEX38Q6PEX7 206 aa7.12□□□□□ -1.27
SMG6-218ENST00000575454 HEPN1Q6WQI6 88 aa7.12□□□□□ -1.27
SMG6-218ENST00000575454 TCF23Q7RTU1 214 aa7.12□□□□□ -1.27
SMG6-218ENST00000575454 ANGPTL5Q86XS5 388 aa7.12□□□□□ -1.27
SMG6-218ENST00000575454 EGFL6Q8IUX8 553 aa7.12□□□□□ -1.27
SMG6-218ENST00000575454 ZNF679Q8IYX0 411 aa7.12□□□□□ -1.27
SMG6-218ENST00000575454 REEP1Q9H902 201 aa7.12□□□□□ -1.27
SMG6-218ENST00000575454 GPR173Q9NS66 373 aa7.12□□□□□ -1.27
SMG6-218ENST00000575454 SMAD5-AS1Q9Y6J3 95 aa7.12□□□□□ -1.27
SMG6-218ENST00000575454 HUWE1Q7Z6Z7 4374 aaKnown RBP7.11□□□□□ -1.27
SMG6-218ENST00000575454 FAM230AA0A1W2PPH8 454 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 SH2D7A6NKC9 451 aaPredicted RBP7.11□□□□□ -1.27
SMG6-218ENST00000575454 BUB1B-PAK6H3BSN5 160 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 FGF16O43320 207 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 HAND1O96004 215 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 IGLV1-47P01700 117 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 CDK2P24941 298 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 MAGEA2P43356 314 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 INSL3P51460 131 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 FUT6P51993 359 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 KIR2DS1Q14954 304 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 KPNB1Q14974 876 aaKnown RBP7.11□□□□□ -1.27
SMG6-218ENST00000575454 HLA-DRB5Q30154 266 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 TPTE2P1Q5T6R2 138 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 FOXRED2Q8IWF2 684 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 BATF2Q8N1L9 274 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 IQCF1Q8N6M8 205 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 OR4D6Q8NGJ1 314 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 RAX2Q96IS3 184 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 RCHY1Q96PM5 261 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 PRR25Q96S07 402 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 MYLK2Q9H1R3 596 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 CCDC134Q9H6E4 229 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 TAS2R3Q9NYW6 316 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 MTCH1Q9NZJ7 389 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 ZNF256Q9Y2P7 627 aaPredicted RBP7.11□□□□□ -1.27
SMG6-218ENST00000575454 KLHDC2Q9Y2U9 406 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 SAMHD1Q9Y3Z3 626 aaKnown RBP7.11□□□□□ -1.27
SMG6-218ENST00000575454 V9GYS6 101 aa7.11□□□□□ -1.27
SMG6-218ENST00000575454 SEC14L6B5MCN3 397 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 GATBO75879 557 aaKnown RBP7.1□□□□□ -1.27
SMG6-218ENST00000575454 CYB5AP00167 134 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 SERPINA3P01011 423 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 SNRNP70P08621 437 aaKnown RBP7.1□□□□□ -1.27
SMG6-218ENST00000575454 LUMP51884 338 aaPredicted RBP7.1□□□□□ -1.27
SMG6-218ENST00000575454 ZNF146Q15072 292 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 PNLIPRP3Q17RR3 467 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 SPIN3Q5JUX0 258 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 BCL2L15Q5TBC7 163 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 PRAMEF5Q5TYX0 476 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 MEPCEQ7L2J0 689 aaKnown RBP7.1□□□□□ -1.27
SMG6-218ENST00000575454 CPOQ8IVL8 374 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 ELMOD2Q8IZ81 293 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 TPRX1Q8N7U7 411 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 CCDC54Q8NEL0 328 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 OR10G2Q8NGC3 310 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 OR14K1Q8NGZ2 314 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 TRMT10AQ8TBZ6 339 aaKnown RBP7.1□□□□□ -1.27
SMG6-218ENST00000575454 CORO2AQ92828 525 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 EMG1Q92979 244 aaKnown RBP7.1□□□□□ -1.27
SMG6-218ENST00000575454 SLAMF9Q96A28 289 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 RPEQ96AT9 228 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 HRASLS5Q96KN8 279 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 NOL4LQ96MY1 436 aaPredicted RBP7.1□□□□□ -1.27
SMG6-218ENST00000575454 CHST6Q9GZX3 395 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 MAGIXQ9H6Y5 334 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 ZMAT4Q9H898 229 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 KRT84Q9NSB2 600 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 CHCHD3Q9NX63 227 aaKnown RBP7.1□□□□□ -1.27
SMG6-218ENST00000575454 NKX1-2Q9UD57 310 aaPredicted RBP7.1□□□□□ -1.27
SMG6-218ENST00000575454 IKZF2Q9UKS7 526 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 GTF2A1LQ9UNN4 478 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 AMMECR1Q9Y4X0 333 aaPredicted RBP7.1□□□□□ -1.27
SMG6-218ENST00000575454 CSMD3Q7Z407 3707 aa7.1□□□□□ -1.27
SMG6-218ENST00000575454 A0A087X0M5 115 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 A0A1B0GX30 115 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 FAM90A18PA6NE21 464 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 FAM90A16PA6NEW6 464 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 FAM90A20PA6NIJ5 464 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 FAM90A9PA6NNJ1 464 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 FAM90A12PA8MX19 464 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 FAM90A5PA8MXJ8 464 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 LOC110117498-PIK3R3F6TDL0 507 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 LY6LH3BQJ8 138 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 AP4M1O00189 453 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 MMP23AO75900 390 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 IGHG2P01859 326 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 TTRP02766 147 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 FAM90A15PP0C7V4 464 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 FAM90A13PP0C7W8 464 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 FAM90A14PP0C7W9 464 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 FAM90A24PP0C7X0 464 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 PTGFRP43088 359 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms