RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 RPUSD1Q9UJJ7 312 aaKnown RBP12.6□□□□□ -0.39
LITAF-217ENST00000575426 ING4Q9UNL4 249 aa12.6□□□□□ -0.39
LITAF-217ENST00000575426 GSTK1Q9Y2Q3 226 aa12.6□□□□□ -0.39
LITAF-217ENST00000575426 TRAV8-7A0A075B6U6 113 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 IGKV1-12A0A0C4DH73 117 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 A0A1W2PQ09 198 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 GABRPO00591 440 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 HAND1O96004 215 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 IGKV1D-12P01611 117 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 PPIAL4GP0DN37 164 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 CALCBP10092 127 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 ADRA2CP18825 462 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 PTGFRP43088 359 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 ZP1P60852 638 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 COL10A1Q03692 680 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 SPIN3Q5JUX0 258 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 METTL11BQ5VVY1 283 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 C1orf229Q6ZS94 237 aaPredicted RBP12.59□□□□□ -0.39
LITAF-217ENST00000575426 CMTM4Q8IZR5 234 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 OR5D13Q8NGL4 314 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 PPP1R35Q8TAP8 253 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 FCGR1BQ92637 280 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 TMEM203Q969S6 136 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 POM121Q96HA1 1249 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 DMRTB1Q96MA1 342 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 DCTN5Q9BTE1 182 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 FAM234AQ9H0X4 552 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 SLITRK2Q9H156 845 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 METTL9Q9H1A3 318 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 OPN4Q9UHM6 478 aa12.59□□□□□ -0.39
LITAF-217ENST00000575426 DSCAML1Q8TD84 2053 aa12.58□□□□□ -0.39
LITAF-217ENST00000575426 FCN3O75636 299 aa12.58□□□□□ -0.4
LITAF-217ENST00000575426 TOX4O94842 621 aa12.58□□□□□ -0.4
LITAF-217ENST00000575426 HTR3BO95264 441 aa12.58□□□□□ -0.4
LITAF-217ENST00000575426 CSTBP04080 98 aaKnown RBP12.58□□□□□ -0.4
LITAF-217ENST00000575426 TK1P04183 234 aa12.58□□□□□ -0.4
LITAF-217ENST00000575426 MTNR1BP49286 362 aa12.58□□□□□ -0.4
LITAF-217ENST00000575426 FGF12P61328 243 aa12.58□□□□□ -0.4
LITAF-217ENST00000575426 ARF6P62330 175 aa12.58□□□□□ -0.4
LITAF-217ENST00000575426 ZNF146Q15072 292 aa12.58□□□□□ -0.4
LITAF-217ENST00000575426 CRIP3Q6Q6R5 217 aa12.58□□□□□ -0.4
LITAF-217ENST00000575426 CDH26Q8IXH8 852 aa12.58□□□□□ -0.4
LITAF-217ENST00000575426 PHC2Q8IXK0 858 aa12.58□□□□□ -0.4
LITAF-217ENST00000575426 SPARTQ8N0X7 666 aa12.58□□□□□ -0.4
LITAF-217ENST00000575426 JAGN1Q8N5M9 183 aa12.58□□□□□ -0.4
LITAF-217ENST00000575426 NKAIN3Q8N8D7 197 aa12.58□□□□□ -0.4
LITAF-217ENST00000575426 DACT3Q96B18 629 aaPredicted RBP12.58□□□□□ -0.4
LITAF-217ENST00000575426 PCGF1Q9BSM1 259 aa12.58□□□□□ -0.4
LITAF-217ENST00000575426 SEBOXQ9HB31 216 aaPredicted RBP12.58□□□□□ -0.4
LITAF-217ENST00000575426 EXOSC4Q9NPD3 245 aaKnown RBP12.58□□□□□ -0.4
LITAF-217ENST00000575426 ONECUT1Q9UBC0 465 aa12.58□□□□□ -0.4
LITAF-217ENST00000575426 NAV3Q8IVL0 2385 aa12.58□□□□□ -0.4
LITAF-217ENST00000575426 NF1P21359 2839 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 TRBV23-1A0A0A0MS06 115 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 A0A1W2PPH5 198 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 K7N7A8 449 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 PIN1P1O15428 100 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 ARL6IP5O75915 188 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 RGS9O75916 674 aaPredicted RBP12.57□□□□□ -0.4
LITAF-217ENST00000575426 SFTPBP07988 381 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 GABRR1P24046 479 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 DUSP1P28562 367 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 GABRA5P31644 462 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 OR3A4PP47883 348 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 RPS25P62851 125 aaKnown RBP12.57□□□□□ -0.4
LITAF-217ENST00000575426 SCN1BQ07699 218 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 BLMHQ13867 455 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 KCTD21Q4G0X4 260 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 HSD17B12Q53GQ0 312 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 ZNF773Q6PK81 442 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 GDPD3Q7L5L3 318 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 FAM185AQ8N0U4 392 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 LY6G5BQ8NDX9 201 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 C8orf46Q8TAG6 207 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 TBC1D15Q8TC07 691 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 PHYHIPQ92561 330 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 SNX22Q96L94 193 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 WDFY2Q96P53 400 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 NR1H4Q96RI1 486 aaPredicted RBP12.57□□□□□ -0.4
LITAF-217ENST00000575426 IL36RNQ9UBH0 155 aa12.57□□□□□ -0.4
LITAF-217ENST00000575426 ZNF780AO75290 641 aaPredicted RBP12.56□□□□□ -0.4
LITAF-217ENST00000575426 CDRT1O95170 752 aa12.56□□□□□ -0.4
LITAF-217ENST00000575426 ZNF44P15621 663 aa12.56□□□□□ -0.4
LITAF-217ENST00000575426 SRMP19623 302 aa12.56□□□□□ -0.4
LITAF-217ENST00000575426 EPHA1P21709 976 aa12.56□□□□□ -0.4
LITAF-217ENST00000575426 FPR2P25090 351 aa12.56□□□□□ -0.4
LITAF-217ENST00000575426 PSMB9P28065 219 aa12.56□□□□□ -0.4
LITAF-217ENST00000575426 RPL31P62899 125 aaKnown RBP12.56□□□□□ -0.4
LITAF-217ENST00000575426 GPR176Q14439 515 aa12.56□□□□□ -0.4
LITAF-217ENST00000575426 INSL4Q14641 139 aa12.56□□□□□ -0.4
LITAF-217ENST00000575426 UBE2UQ5VVX9 321 aa12.56□□□□□ -0.4
LITAF-217ENST00000575426 GLT8D1Q68CQ7 371 aa12.56□□□□□ -0.4
LITAF-217ENST00000575426 ELP2Q6IA86 826 aa12.56□□□□□ -0.4
LITAF-217ENST00000575426 OR10K1Q8NGX5 313 aa12.56□□□□□ -0.4
LITAF-217ENST00000575426 UPRTQ96BW1 309 aa12.56□□□□□ -0.4
LITAF-217ENST00000575426 FOXRED1Q96CU9 486 aaPredicted RBP12.56□□□□□ -0.4
LITAF-217ENST00000575426 OCEL1Q9H607 264 aa12.56□□□□□ -0.4
LITAF-217ENST00000575426 NUP50Q9UKX7 468 aa12.56□□□□□ -0.4
LITAF-217ENST00000575426 MRPS28Q9Y2Q9 187 aaKnown RBP12.56□□□□□ -0.4
LITAF-217ENST00000575426 SF3B6Q9Y3B4 125 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms