RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 TAS2R20P59543 309 aa20.23■□□□□ 0.83
ATPAF1-213ENST00000574428 SCN1BQ07699 218 aa20.23■□□□□ 0.83
ATPAF1-213ENST00000574428 CRYBG3Q68DQ2 2970 aa20.23■□□□□ 0.83
ATPAF1-213ENST00000574428 C20orf204Q6ZNR8 217 aa20.23■□□□□ 0.83
ATPAF1-213ENST00000574428 GDPD3Q7L5L3 318 aa20.23■□□□□ 0.83
ATPAF1-213ENST00000574428 OR56B1Q8NGI3 324 aa20.23■□□□□ 0.83
ATPAF1-213ENST00000574428 OR10R2Q8NGX6 335 aa20.23■□□□□ 0.83
ATPAF1-213ENST00000574428 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.23■□□□□ 0.83
ATPAF1-213ENST00000574428 PFDN1O60925 122 aa20.23■□□□□ 0.83
ATPAF1-213ENST00000574428 PTH2RP49190 550 aa20.23■□□□□ 0.83
ATPAF1-213ENST00000574428 FAM189A2Q15884 450 aa20.23■□□□□ 0.83
ATPAF1-213ENST00000574428 NHLRC3Q5JS37 347 aa20.23■□□□□ 0.83
ATPAF1-213ENST00000574428 FAM201AQ5SY85 155 aa20.23■□□□□ 0.83
ATPAF1-213ENST00000574428 ACP7Q6ZNF0 438 aa20.23■□□□□ 0.83
ATPAF1-213ENST00000574428 CHST4Q8NCG5 386 aa20.23■□□□□ 0.83
ATPAF1-213ENST00000574428 C19orf18Q8NEA5 215 aa20.23■□□□□ 0.83
ATPAF1-213ENST00000574428 ABHD1Q96SE0 405 aa20.23■□□□□ 0.83
ATPAF1-213ENST00000574428 ZMAT3Q9HA38 289 aaKnown RBP20.23■□□□□ 0.83
ATPAF1-213ENST00000574428 DOPEY2Q9Y3R5 2298 aa20.23■□□□□ 0.83
ATPAF1-213ENST00000574428 FUOMA2VDF0 154 aa20.22■□□□□ 0.83
ATPAF1-213ENST00000574428 SSX4O60224 188 aa20.22■□□□□ 0.83
ATPAF1-213ENST00000574428 LHBP01229 141 aa20.22■□□□□ 0.83
ATPAF1-213ENST00000574428 HLA-DQB1P01920 261 aa20.22■□□□□ 0.83
ATPAF1-213ENST00000574428 CHRM2P08172 466 aa20.22■□□□□ 0.83
ATPAF1-213ENST00000574428 PTHLHP12272 177 aa20.22■□□□□ 0.83
ATPAF1-213ENST00000574428 IRF2P14316 349 aa20.22■□□□□ 0.83
ATPAF1-213ENST00000574428 RAB12Q6IQ22 244 aa20.22■□□□□ 0.83
ATPAF1-213ENST00000574428 CCL17Q92583 94 aa20.22■□□□□ 0.83
ATPAF1-213ENST00000574428 DYSFO75923 2080 aa20.22■□□□□ 0.83
ATPAF1-213ENST00000574428 A0A0A6YYH2 397 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 IGHV1-69-2A0A0G2JMI3 117 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 A6NJ64 397 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 FOXI3A8MTJ6 420 aaPredicted RBP20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 H7C417 338 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 OR7C1O76099 320 aaPredicted RBP20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 LY6HO94772 140 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 ZNF205O95201 554 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 BLVRBP30043 206 aaPredicted RBP20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 CD80P33681 288 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 SMIM21Q3B7S5 101 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 PLAC9Q5JTB6 97 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 SIGIRRQ6IA17 410 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 HPS1Q92902 700 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 GCDHQ92947 438 aaPredicted RBP20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 LINC00854A0A1B0GVQ3 168 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 LRRC30A6NM36 301 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 SCGNO76038 276 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 NR4A2P43354 598 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 BCAP31P51572 246 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 TMEM50BP56557 158 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 IKZF1Q13422 519 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 ASAH1Q13510 395 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 NKAPLQ5M9Q1 402 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 HIST2H2BCQ6DN03 193 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 BAIAP2L2Q6UXY1 529 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 RAB3CQ96E17 227 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 C14orf79Q96F83 325 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 ARHGAP5-AS1Q96IT6 56 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 TMEM106BQ9NUM4 274 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 NPTNQ9Y639 398 aa20.21■□□□□ 0.83
ATPAF1-213ENST00000574428 IGHV3OR15-7A0A075B7D8 119 aa20.2■□□□□ 0.82
ATPAF1-213ENST00000574428 LYNX1G3V0Z9 82 aa20.2■□□□□ 0.82
ATPAF1-213ENST00000574428 LYNX1P0DP58 116 aa20.2■□□□□ 0.82
ATPAF1-213ENST00000574428 GNB3P16520 340 aa20.2■□□□□ 0.82
ATPAF1-213ENST00000574428 TRIQKQ629K1 86 aa20.2■□□□□ 0.82
ATPAF1-213ENST00000574428 SFRP4Q6FHJ7 346 aaPredicted RBP20.2■□□□□ 0.82
ATPAF1-213ENST00000574428 PYHIN1Q6K0P9 492 aa20.2■□□□□ 0.82
ATPAF1-213ENST00000574428 CCL19Q99731 98 aa20.2■□□□□ 0.82
ATPAF1-213ENST00000574428 RASL12Q9NYN1 266 aa20.2■□□□□ 0.82
ATPAF1-213ENST00000574428 OR14J1Q9UGF5 321 aa20.2■□□□□ 0.82
ATPAF1-213ENST00000574428 DSCAMO60469 2012 aa20.2■□□□□ 0.82
ATPAF1-213ENST00000574428 TFF1P04155 84 aa20.19■□□□□ 0.82
ATPAF1-213ENST00000574428 CEBPDP49716 269 aaPredicted RBP20.19■□□□□ 0.82
ATPAF1-213ENST00000574428 IL13RA2Q14627 380 aa20.19■□□□□ 0.82
ATPAF1-213ENST00000574428 FIP1L1Q6UN15 594 aaKnown RBP20.19■□□□□ 0.82
ATPAF1-213ENST00000574428 C6orf201Q7Z4U5 140 aa20.19■□□□□ 0.82
ATPAF1-213ENST00000574428 OR5T2Q8NGG2 359 aa20.19■□□□□ 0.82
ATPAF1-213ENST00000574428 IGFBPL1Q8WX77 278 aa20.19■□□□□ 0.82
ATPAF1-213ENST00000574428 NUDT16L1Q9BRJ7 211 aaKnown RBP20.19■□□□□ 0.82
ATPAF1-213ENST00000574428 DNAJB11Q9UBS4 358 aa20.19■□□□□ 0.82
ATPAF1-213ENST00000574428 ELF5Q9UKW6 265 aaPredicted RBP20.19■□□□□ 0.82
ATPAF1-213ENST00000574428 TANC2Q9HCD6 1990 aa20.19■□□□□ 0.82
ATPAF1-213ENST00000574428 COL8A2P25067 703 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 RFX2P48378 723 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 ZNF146Q15072 292 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 CDNFQ49AH0 187 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 RNASE12Q5GAN4 147 aaKnown RBP20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 SPIN3Q5JUX0 258 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 OLFML2AQ68BL7 652 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 BRICD5Q6PL45 260 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 CCBE1Q6UXH8 406 aaPredicted RBP20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 NEU4Q8WWR8 484 aaPredicted RBP20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 NRGNQ92686 78 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 YIPF5Q969M3 257 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 LIME1Q9H400 295 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 AUNIPQ9H7T9 357 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 TMEM235A6NFC5 223 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 TMEM178BH3BS89 294 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 OVOL3O00110 214 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 PLA2G10O15496 165 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms