RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 ATF1P18846 271 aa8.14□□□□□ -1.11
RPA1-206ENST00000573994 BCL3P20749 454 aa8.14□□□□□ -1.11
RPA1-206ENST00000573994 DUSP1P28562 367 aa8.14□□□□□ -1.11
RPA1-206ENST00000573994 NPBWR2P48146 333 aa8.14□□□□□ -1.11
RPA1-206ENST00000573994 MTCP1P56278 107 aa8.14□□□□□ -1.11
RPA1-206ENST00000573994 EDDM3BP56851 147 aa8.14□□□□□ -1.11
RPA1-206ENST00000573994 OLFML2AQ68BL7 652 aa8.14□□□□□ -1.11
RPA1-206ENST00000573994 DHRS7BQ6IAN0 325 aaPredicted RBP8.14□□□□□ -1.11
RPA1-206ENST00000573994 C17orf107Q6ZR85 190 aa8.14□□□□□ -1.11
RPA1-206ENST00000573994 RNF144BQ7Z419 303 aa8.14□□□□□ -1.11
RPA1-206ENST00000573994 Q8IYB0 196 aa8.14□□□□□ -1.11
RPA1-206ENST00000573994 ZNF676Q8N7Q3 588 aa8.14□□□□□ -1.11
RPA1-206ENST00000573994 DNAAF1Q8NEP3 725 aa8.14□□□□□ -1.11
RPA1-206ENST00000573994 OR5D18Q8NGL1 313 aa8.14□□□□□ -1.11
RPA1-206ENST00000573994 OR13C3Q8NGS6 347 aa8.14□□□□□ -1.11
RPA1-206ENST00000573994 APH1BQ8WW43 257 aa8.14□□□□□ -1.11
RPA1-206ENST00000573994 RDH12Q96NR8 316 aa8.14□□□□□ -1.11
RPA1-206ENST00000573994 SSBP4Q9BWG4 385 aaPredicted RBP8.14□□□□□ -1.11
RPA1-206ENST00000573994 CHST6Q9GZX3 395 aa8.14□□□□□ -1.11
RPA1-206ENST00000573994 SLITRK2Q9H156 845 aa8.14□□□□□ -1.11
RPA1-206ENST00000573994 ISG20L2Q9H9L3 353 aaKnown RBP8.14□□□□□ -1.11
RPA1-206ENST00000573994 BEX1Q9HBH7 125 aa8.14□□□□□ -1.11
RPA1-206ENST00000573994 NEK6Q9HC98 313 aa8.14□□□□□ -1.11
RPA1-206ENST00000573994 INPP5EQ9NRR6 644 aa8.14□□□□□ -1.11
RPA1-206ENST00000573994 VPREB3Q9UKI3 123 aa8.14□□□□□ -1.11
RPA1-206ENST00000573994 SF3B6Q9Y3B4 125 aaKnown RBP8.14□□□□□ -1.11
RPA1-206ENST00000573994 LOC100130705A0A1B0GUX0 176 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 OR4C45A6NMZ5 311 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 E9PI62 339 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 H3BUX3 64 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 K7N7A8 449 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 ZNF737O75373 536 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 FADS2O95864 444 aaKnown RBP8.13□□□□□ -1.11
RPA1-206ENST00000573994 HAND1O96004 215 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 CYB5AP00167 134 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 CHRM2P08172 466 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 PRKACAP17612 351 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 PRKACBP22694 351 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 GABRR1P24046 479 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 RBP2P50120 134 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 ATP1B3P54709 279 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 ALKBH1Q13686 389 aaKnown RBP8.13□□□□□ -1.11
RPA1-206ENST00000573994 GALEQ14376 348 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 LY6EQ16553 131 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 SMN1Q16637 294 aaKnown RBP8.13□□□□□ -1.11
RPA1-206ENST00000573994 ZSCAN26Q16670 478 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 MIDNQ504T8 468 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 PLA1AQ53H76 456 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 PRR31Q5SQ13 230 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 LPCAT4Q643R3 524 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 GDPGP1Q6ZNW5 385 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 UTS2BQ765I0 119 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 TCF23Q7RTU1 214 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 TPRX1Q8N7U7 411 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 OR52I1Q8NGK6 324 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 RHOXF1Q8NHV9 184 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 STMN2Q93045 179 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 OPALINQ96PE5 141 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 HEXA-AS1Q9H8Q6 139 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 RHOFQ9HBH0 211 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 C8orf4Q9NR00 106 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 FAM118AQ9NWS6 357 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 SMPD3Q9NY59 655 aaPredicted RBP8.13□□□□□ -1.11
RPA1-206ENST00000573994 HHLA2Q9UM44 414 aa8.13□□□□□ -1.11
RPA1-206ENST00000573994 IGKV1-12A0A0C4DH73 117 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 TRBV2A0A0J9YWF9 115 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 CLPSL1A2RUU4 121 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 SIRPB1O00241 398 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 CLIC3O95833 236 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 IGKV1D-12P01611 117 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 DLX6P56179 175 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 KRTAP10-3P60369 221 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 RAB40BQ12829 278 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 GRK1Q15835 563 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 LRRC36Q1X8D7 754 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 KLHL22Q53GT1 634 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 Q6ZSV7 163 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 LHFPL2Q6ZUX7 228 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 GDPD3Q7L5L3 318 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 LHFPL4Q7Z7J7 247 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 OR8H2Q8N162 312 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 SYS1Q8N2H4 156 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 C11orf42Q8N5U0 333 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 DTX3Q8N9I9 347 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 BEND2Q8NDZ0 799 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 ZNF555Q8NEP9 628 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 OR5R1Q8NH85 324 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 CNIH3Q8TBE1 160 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 TSEN15Q8WW01 171 aaKnown RBP8.12□□□□□ -1.11
RPA1-206ENST00000573994 SPSB1Q96BD6 273 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 AJUBAQ96IF1 538 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 PDCD1LG2Q9BQ51 273 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 ZNF649Q9BS31 505 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 PPA2Q9H2U2 334 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 MRPS18AQ9NVS2 196 aaKnown RBP8.12□□□□□ -1.11
RPA1-206ENST00000573994 ERVK13-1Q9NX77 482 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 GLS2Q9UI32 602 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 GSTK1Q9Y2Q3 226 aa8.12□□□□□ -1.11
RPA1-206ENST00000573994 RPL36Q9Y3U8 105 aaKnown RBP8.12□□□□□ -1.11
RPA1-206ENST00000573994 VWFP04275 2813 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms