RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 SRMP19623 302 aa10.59□□□□□ -0.71
TRAPPC1-206ENST00000573989 RIPPLY3P57055 190 aa10.59□□□□□ -0.71
TRAPPC1-206ENST00000573989 ZNF146Q15072 292 aa10.59□□□□□ -0.71
TRAPPC1-206ENST00000573989 DGUOKQ16854 277 aa10.59□□□□□ -0.71
TRAPPC1-206ENST00000573989 GLT8D1Q68CQ7 371 aa10.59□□□□□ -0.71
TRAPPC1-206ENST00000573989 ELP2Q6IA86 826 aa10.59□□□□□ -0.71
TRAPPC1-206ENST00000573989 CMTM4Q8IZR5 234 aa10.59□□□□□ -0.71
TRAPPC1-206ENST00000573989 CD177Q8N6Q3 437 aa10.59□□□□□ -0.71
TRAPPC1-206ENST00000573989 ASCC1Q8N9N2 400 aaKnown RBP10.59□□□□□ -0.71
TRAPPC1-206ENST00000573989 ZNRF1Q8ND25 227 aa10.59□□□□□ -0.71
TRAPPC1-206ENST00000573989 NANPQ8TBE9 248 aa10.59□□□□□ -0.71
TRAPPC1-206ENST00000573989 TBC1D15Q8TC07 691 aa10.59□□□□□ -0.71
TRAPPC1-206ENST00000573989 UQCC2Q9BRT2 126 aa10.59□□□□□ -0.71
TRAPPC1-206ENST00000573989 TMPRSS13Q9BYE2 586 aa10.59□□□□□ -0.71
TRAPPC1-206ENST00000573989 EXOSC4Q9NPD3 245 aaKnown RBP10.59□□□□□ -0.71
TRAPPC1-206ENST00000573989 NDUFB11Q9NX14 153 aa10.59□□□□□ -0.71
TRAPPC1-206ENST00000573989 RPUSD1Q9UJJ7 312 aaKnown RBP10.59□□□□□ -0.71
TRAPPC1-206ENST00000573989 ING4Q9UNL4 249 aa10.59□□□□□ -0.71
TRAPPC1-206ENST00000573989 GSTK1Q9Y2Q3 226 aa10.59□□□□□ -0.71
TRAPPC1-206ENST00000573989 MAB21L2Q9Y586 359 aa10.59□□□□□ -0.71
TRAPPC1-206ENST00000573989 NAV3Q8IVL0 2385 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 A0A087WXM4 84 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 TRBV23-1A0A0A0MS06 115 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 IGKV1-12A0A0C4DH73 117 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 F8VVB4 439 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 F8VWA3 439 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 PIN1P1O15428 100 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 IFNA2P01563 188 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 IGKV1D-12P01611 117 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 SFTPBP07988 381 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 UCHL1P09936 223 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 FAM157CP0CG43 387 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 PPIAL4GP0DN37 164 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 AMY2BP19961 511 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 FGF12P61328 243 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 RPS25P62851 125 aaKnown RBP10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 PAX2Q02962 417 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 COL10A1Q03692 680 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 PAX8Q06710 450 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 INSL4Q14641 139 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 METTL11BQ5VVY1 283 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 SNX22Q96L94 193 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 DCTN5Q9BTE1 182 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 CNTD2Q9H8S5 307 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 IL36GQ9NZH8 169 aa10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 SETD2Q9BYW2 2564 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC1-206ENST00000573989 A0A1B0GW55 424 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 A0A1W2PQ09 198 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 C22orf46C9J442 243 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 K7N7A8 449 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 HTR3BO95264 441 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 TK1P04183 234 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 DUX4L2P0CJ85 424 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 DUX4L3P0CJ86 424 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 DUX4L4P0CJ87 422 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 DUX4L5P0CJ88 424 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 DUX4L6P0CJ89 424 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 DUX4L7P0CJ90 424 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 SELLP14151 372 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 ZNF44P15621 663 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 GALP22466 123 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 OR3A4PP47883 348 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 CEBPDP49716 269 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 PSMD7P51665 324 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 SNU13P55769 128 aaKnown RBP10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 AWAT2Q6E213 333 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 CRIP3Q6Q6R5 217 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 DUX4L9Q6RFH8 374 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 ASCL4Q6XD76 172 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 IL17RELQ6ZVW7 336 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 GDPD3Q7L5L3 318 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 RNF144BQ7Z419 303 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 C1QL2Q7Z5L3 287 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 CHST4Q8NCG5 386 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 TSPAN14Q8NG11 270 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 C8orf46Q8TAG6 207 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 DACT3Q96B18 629 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 GHRLQ9UBU3 117 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 DUX4Q9UBX2 424 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 METRNQ9UJH8 293 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 MRPS28Q9Y2Q9 187 aaKnown RBP10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 SF3B6Q9Y3B4 125 aaKnown RBP10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 NIPBLQ6KC79 2804 aaeCLIP10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 C2CD3Q4AC94 2353 aa10.57□□□□□ -0.72
TRAPPC1-206ENST00000573989 TRDV1A0A1B0GX56 115 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 hCG_1809904A0A1W2PP81 198 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 A0A1W2PPE2 198 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 A0A1W2PR64 198 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 A0A1W2PRV1 198 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 FUOMA2VDF0 154 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 MAGEA13PA6NCF6 341 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 DEGS1O15121 323 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 TOX4O94842 621 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 CDRT1O95170 752 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 TFF1P04155 84 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 GTF2F2P13984 249 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 SERPINA2P20848 420 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 GABRR1P24046 479 aa10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 CALRP27797 417 aaKnown RBP10.56□□□□□ -0.72
TRAPPC1-206ENST00000573989 FABP5Q01469 135 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms