RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 CA11O75493 328 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 RBBP9O75884 186 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 OR7C1O76099 320 aaPredicted RBP11.55□□□□□ -0.56
CCDC40-209ENST00000573474 LPLP06858 475 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 GSTT2BP0CG30 244 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 CHATP28329 748 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 GDNFP39905 211 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 PMELP40967 661 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 SNU13P55769 128 aaKnown RBP11.55□□□□□ -0.56
CCDC40-209ENST00000573474 GNG2P59768 71 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 CCL8P80075 99 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 GUCA2AQ02747 115 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 SSBP1Q04837 148 aaKnown RBP11.55□□□□□ -0.56
CCDC40-209ENST00000573474 NKAPLQ5M9Q1 402 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 AGAP6Q5VW22 663 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 ZNF57Q68EA5 555 aaPredicted RBP11.55□□□□□ -0.56
CCDC40-209ENST00000573474 OR11L1Q8NGX0 322 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 SETD6Q8TBK2 473 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 Q8TCH9 128 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 ST8SIA4Q92187 359 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 IFT22Q9H7X7 185 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 SPACA1Q9HBV2 294 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 GCM1Q9NP62 436 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 CBLN4Q9NTU7 201 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 RNF7Q9UBF6 113 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 IL36RNQ9UBH0 155 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 MTFP1Q9UDX5 166 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 GLS2Q9UI32 602 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 ELF5Q9UKW6 265 aaPredicted RBP11.55□□□□□ -0.56
CCDC40-209ENST00000573474 KCNK7Q9Y2U2 307 aa11.55□□□□□ -0.56
CCDC40-209ENST00000573474 FLNCQ14315 2725 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 CLEC18AA5D8T8 446 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 SRRM5B3KS81 715 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 ECDO95905 644 aaPredicted RBP11.54□□□□□ -0.56
CCDC40-209ENST00000573474 LHBP01229 141 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 GLAP06280 429 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 PLA2G2AP14555 144 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 GLRA1P23415 457 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 PPOXP50336 477 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 GMFBP60983 142 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 IKZF1Q13422 519 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 ASAH1Q13510 395 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 ARFRP1Q13795 201 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 ZNF146Q15072 292 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 PDCD1Q15116 288 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 RGS21Q2M5E4 152 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 SMIM21Q3B7S5 101 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 SPIN3Q5JUX0 258 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 ATAD3CQ5T2N8 411 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 CLEC18BQ6UXF7 455 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 ACP7Q6ZNF0 438 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 C6orf201Q7Z4U5 140 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 RTN4RL2Q86UN3 420 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 FAM90A1Q86YD7 464 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 ZCCHC24Q8N2G6 241 aaKnown RBP11.54□□□□□ -0.56
CCDC40-209ENST00000573474 TOMM5Q8N4H5 51 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 POC5Q8NA72 575 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 CLEC18CQ8NCF0 446 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 FAAP24Q9BTP7 215 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 SAP30LQ9HAJ7 183 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 ZNF581Q9P0T4 197 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 KLK11Q9UBX7 282 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 TBC1D24Q9ULP9 559 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 PPP1R3CQ9UQK1 317 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 PLEKHA6Q9Y2H5 1048 aa11.54□□□□□ -0.56
CCDC40-209ENST00000573474 LINC00854A0A1B0GVQ3 168 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 LRRC30A6NM36 301 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 C3orf80F5H4A9 247 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 J3QKU1 62 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 SH2D1BO14796 132 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 WNT9BO14905 357 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 DEGS1O15121 323 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 KNG1P01042 644 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 IRF2P14316 349 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 DUSP1P28562 367 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 CBX5P45973 191 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 AP3S2P59780 193 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 ACTBP60709 375 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 ACTG1P63261 375 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 OLFML2AQ68BL7 652 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 Q6P435 159 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 TRAPPC6BQ86SZ2 158 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 DTX2Q86UW9 622 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 NUDCD2Q8WVJ2 157 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 HPS1Q92902 700 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 COX4I2Q96KJ9 171 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 WDR13Q9H1Z4 485 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 TAS2R8Q9NYW2 309 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 RCC2Q9P258 522 aaKnown RBP11.53□□□□□ -0.56
CCDC40-209ENST00000573474 NPTNQ9Y639 398 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 ROS1P08922 2347 aa11.53□□□□□ -0.56
CCDC40-209ENST00000573474 ICE1Q9Y2F5 2266 aa11.52□□□□□ -0.56
CCDC40-209ENST00000573474 USP9XQ93008 2570 aaPredicted RBP11.52□□□□□ -0.56
CCDC40-209ENST00000573474 A0A1W2PPR1 153 aa11.52□□□□□ -0.57
CCDC40-209ENST00000573474 ANKRD20A5PA0PJZ0 165 aa11.52□□□□□ -0.57
CCDC40-209ENST00000573474 FAM221AA4D161 298 aa11.52□□□□□ -0.57
CCDC40-209ENST00000573474 MCRIP1C9JLW8 97 aa11.52□□□□□ -0.57
CCDC40-209ENST00000573474 IFNL4K9M1U5 179 aa11.52□□□□□ -0.57
CCDC40-209ENST00000573474 PLA2G10O15496 165 aa11.52□□□□□ -0.57
CCDC40-209ENST00000573474 SSX5O60225 188 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms