RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 MIDNQ504T8 468 aa14.08□□□□□ -0.16
SMG6-212ENST00000573153 OLFML2AQ68BL7 652 aa14.08□□□□□ -0.16
SMG6-212ENST00000573153 ZSCAN4Q8NAM6 433 aaPredicted RBP14.08□□□□□ -0.16
SMG6-212ENST00000573153 BEND2Q8NDZ0 799 aa14.08□□□□□ -0.16
SMG6-212ENST00000573153 OR4M1Q8NGD0 313 aa14.08□□□□□ -0.16
SMG6-212ENST00000573153 DPAGT1Q9H3H5 408 aa14.08□□□□□ -0.16
SMG6-212ENST00000573153 ZCCHC4Q9H5U6 513 aa14.08□□□□□ -0.16
SMG6-212ENST00000573153 VPREB3Q9UKI3 123 aa14.08□□□□□ -0.16
SMG6-212ENST00000573153 SF3B6Q9Y3B4 125 aaKnown RBP14.08□□□□□ -0.16
SMG6-212ENST00000573153 FAM96BQ9Y3D0 163 aa14.08□□□□□ -0.16
SMG6-212ENST00000573153 VWFP04275 2813 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 IGKV1-12A0A0C4DH73 117 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 IRGMA1A4Y4 181 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 C17orf98A8MV24 154 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 H0YAE9 185 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 CASQ2O14958 399 aaPredicted RBP14.07□□□□□ -0.16
SMG6-212ENST00000573153 CLPXO76031 633 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 CYB5AP00167 134 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 IGKV1D-12P01611 117 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 PEX2P28328 305 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 NPBWR2P48146 333 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 IL18R1Q13478 541 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 RCN1Q15293 331 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 SPIN3Q5JUX0 258 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 ASPHD2Q6ICH7 369 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 C17orf107Q6ZR85 190 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 SAXO1Q8IYX7 474 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 OR8H2Q8N162 312 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 FAM58AQ8N1B3 248 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 SETD9Q8NE22 299 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 OR52N4Q8NGI2 321 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 OR4F5Q8NH21 305 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 OR5AK2Q8NH90 309 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 PIFOQ8TCI5 191 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 SNX22Q96L94 193 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 NEK6Q9HC98 313 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 HSPE1-MOB4S4R3N1 261 aa14.07□□□□□ -0.16
SMG6-212ENST00000573153 hCG_1809904A0A1W2PP81 198 aa14.06□□□□□ -0.16
SMG6-212ENST00000573153 A0A1W2PPE2 198 aa14.06□□□□□ -0.16
SMG6-212ENST00000573153 A0A1W2PR64 198 aa14.06□□□□□ -0.16
SMG6-212ENST00000573153 A0A1W2PRV1 198 aa14.06□□□□□ -0.16
SMG6-212ENST00000573153 MEIOCA2RUB1 952 aa14.06□□□□□ -0.16
SMG6-212ENST00000573153 TSPAN9O75954 239 aa14.06□□□□□ -0.16
SMG6-212ENST00000573153 KDM4BO94953 1096 aa14.06□□□□□ -0.16
SMG6-212ENST00000573153 BMXP51813 675 aa14.06□□□□□ -0.16
SMG6-212ENST00000573153 MEF2CQ06413 473 aaPredicted RBP14.06□□□□□ -0.16
SMG6-212ENST00000573153 OGFRL1Q5TC84 451 aaPredicted RBP14.06□□□□□ -0.16
SMG6-212ENST00000573153 ZNF529Q6P280 563 aa14.06□□□□□ -0.16
SMG6-212ENST00000573153 SERPINA12Q8IW75 414 aa14.06□□□□□ -0.16
SMG6-212ENST00000573153 DYNAPQ8N1N2 210 aa14.06□□□□□ -0.16
SMG6-212ENST00000573153 OR5D14Q8NGL3 314 aa14.06□□□□□ -0.16
SMG6-212ENST00000573153 OR13C9Q8NGT0 318 aa14.06□□□□□ -0.16
SMG6-212ENST00000573153 CNIH3Q8TBE1 160 aa14.06□□□□□ -0.16
SMG6-212ENST00000573153 EMG1Q92979 244 aaKnown RBP14.06□□□□□ -0.16
SMG6-212ENST00000573153 PDCD1LG2Q9BQ51 273 aa14.06□□□□□ -0.16
SMG6-212ENST00000573153 COMMD4Q9H0A8 199 aa14.06□□□□□ -0.16
SMG6-212ENST00000573153 MEGF9Q9H1U4 602 aa14.06□□□□□ -0.16
SMG6-212ENST00000573153 C16orf95Q9H693 158 aa14.06□□□□□ -0.16
SMG6-212ENST00000573153 HEXA-AS1Q9H8Q6 139 aa14.06□□□□□ -0.16
SMG6-212ENST00000573153 BEX1Q9HBH7 125 aa14.06□□□□□ -0.16
SMG6-212ENST00000573153 HMG20AQ9NP66 347 aa14.06□□□□□ -0.16
SMG6-212ENST00000573153 RBFOX1Q9NWB1 397 aaKnown RBP14.06□□□□□ -0.16
SMG6-212ENST00000573153 DIMT1Q9UNQ2 313 aaKnown RBP14.06□□□□□ -0.16
SMG6-212ENST00000573153 FAM90A8PA6NJQ4 464 aa14.05□□□□□ -0.16
SMG6-212ENST00000573153 ODF3BA8MYP8 253 aa14.05□□□□□ -0.16
SMG6-212ENST00000573153 WIPF1O43516 503 aa14.05□□□□□ -0.16
SMG6-212ENST00000573153 SULT1B1O43704 296 aa14.05□□□□□ -0.16
SMG6-212ENST00000573153 PSPNO60542 156 aa14.05□□□□□ -0.16
SMG6-212ENST00000573153 CLIC3O95833 236 aa14.05□□□□□ -0.16
SMG6-212ENST00000573153 HAND1O96004 215 aa14.05□□□□□ -0.16
SMG6-212ENST00000573153 BCL3P20749 454 aa14.05□□□□□ -0.16
SMG6-212ENST00000573153 POU3F4P49335 361 aa14.05□□□□□ -0.16
SMG6-212ENST00000573153 ETV1P50549 477 aa14.05□□□□□ -0.16
SMG6-212ENST00000573153 AANATQ16613 207 aa14.05□□□□□ -0.16
SMG6-212ENST00000573153 LRRC36Q1X8D7 754 aa14.05□□□□□ -0.16
SMG6-212ENST00000573153 RPL22L1Q6P5R6 122 aaKnown RBP14.05□□□□□ -0.16
SMG6-212ENST00000573153 DHRSXQ8N5I4 330 aa14.05□□□□□ -0.16
SMG6-212ENST00000573153 ASCC1Q8N9N2 400 aaKnown RBP14.05□□□□□ -0.16
SMG6-212ENST00000573153 PPP1R35Q8TAP8 253 aa14.05□□□□□ -0.16
SMG6-212ENST00000573153 MEX3AA1L020 520 aaKnown RBP14.04□□□□□ -0.16
SMG6-212ENST00000573153 CRYBA1P05813 215 aa14.04□□□□□ -0.16
SMG6-212ENST00000573153 ERP29P30040 261 aaKnown RBP14.04□□□□□ -0.16
SMG6-212ENST00000573153 ZP1P60852 638 aa14.04□□□□□ -0.16
SMG6-212ENST00000573153 CDK5R1Q15078 307 aa14.04□□□□□ -0.16
SMG6-212ENST00000573153 TMPRSS11AQ6ZMR5 421 aa14.04□□□□□ -0.16
SMG6-212ENST00000573153 GDPGP1Q6ZNW5 385 aa14.04□□□□□ -0.16
SMG6-212ENST00000573153 OR5R1Q8NH85 324 aa14.04□□□□□ -0.16
SMG6-212ENST00000573153 FBLIM1Q8WUP2 373 aa14.04□□□□□ -0.16
SMG6-212ENST00000573153 CYGBQ8WWM9 190 aa14.04□□□□□ -0.16
SMG6-212ENST00000573153 RGP1Q92546 391 aaPredicted RBP14.04□□□□□ -0.16
SMG6-212ENST00000573153 DHDHQ9UQ10 334 aa14.04□□□□□ -0.16
SMG6-212ENST00000573153 EXOSC1Q9Y3B2 195 aaKnown RBP14.04□□□□□ -0.16
SMG6-212ENST00000573153 OGG1O15527 345 aa14.03□□□□□ -0.16
SMG6-212ENST00000573153 ANGPTL7O43827 346 aa14.03□□□□□ -0.16
SMG6-212ENST00000573153 ZNF728P0DKX0 622 aa14.03□□□□□ -0.16
SMG6-212ENST00000573153 PIPP12273 146 aaPredicted RBP14.03□□□□□ -0.16
SMG6-212ENST00000573153 PRKACAP17612 351 aa14.03□□□□□ -0.16
SMG6-212ENST00000573153 LMO1P25800 156 aa14.03□□□□□ -0.16
SMG6-212ENST00000573153 GTF2A1P52655 376 aaPredicted RBP14.03□□□□□ -0.16
SMG6-212ENST00000573153 GDPD3Q7L5L3 318 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms