RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 FOPNLQ96NB1 174 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 ZNF300Q96RE9 604 aaPredicted RBP4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 PLEKHF1Q96S99 279 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 EBPLQ9BY08 206 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 SLC17A9Q9BYT1 436 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 OR51E2Q9H255 320 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 RARRES3Q9UL19 164 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 NEU3Q9UQ49 428 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 HEY1Q9Y5J3 304 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 WSB1Q9Y6I7 421 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 KDM5BQ9UGL1 1544 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 ARAP1Q96P48 1450 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 IGHV3OR16-12A0A075B7B8 117 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 TRAV8-2A0A0B4J237 113 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 IGHV3-20A0A0C4DH32 117 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 PVALEFA0A1B0GWK0 134 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 RBMY1BA6NDE4 496 aaKnown RBP4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 RBMY1EA6NEQ0 496 aaKnown RBP4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 BTNL10A8MVZ5 291 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 K7ESM1 405 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 MGST3O14880 152 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 HMGB3O15347 200 aaKnown RBP4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 MFSD11O43934 449 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 C1QL1O75973 258 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 GADD45GO95257 159 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 TSHBP01222 138 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 RBMY1DP0C7P1 496 aaKnown RBP4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 OR56A5P0C7T3 313 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 RBMY1A1P0DJD3 496 aaKnown RBP4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 ZNF708P17019 499 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 KLK2P20151 261 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 DDTP30046 118 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 H2BFSP57053 126 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 TCP10Q12799 353 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 MPPED2Q15777 294 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 C14orf28Q4W4Y0 310 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 RSBN1Q5VWQ0 802 aaPredicted RBP4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 STEAP4Q687X5 459 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 LEMD1Q68G75 181 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 NEGR1Q7Z3B1 354 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 OOSP2Q86WS3 158 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 DOLPP1Q86YN1 238 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 ZNF567Q8N184 647 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 ZNF485Q8NCK3 441 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 OR5AP2Q8NGF4 316 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 JOSD2Q8TAC2 188 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 SRSF12Q8WXF0 261 aaKnown RBP4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 GHSRQ92847 366 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 GMPPAQ96IJ6 420 aaPredicted RBP4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 FAM19A4Q96LR4 140 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 CNBD2Q96M20 576 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 RTBDNQ9BSG5 229 aaPredicted RBP4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 GGACTQ9BVM4 153 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 RSPO3Q9BXY4 272 aaPredicted RBP4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 PRSS22Q9GZN4 317 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 ORC6Q9Y5N6 252 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 ZNF780BQ9Y6R6 833 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 NPATQ14207 1427 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 BICRAQ9NZM4 1560 aa4.02□□□□□ -1.77
TOPBP1-210ENST00000572787 CLUHO75153 1309 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 IGHV3OR16-9A0A0B4J2B5 98 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 A0A1W2PRE2 83 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 RBFOX3A6NFN3 312 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 EEF1E1-BLOC1S5C9J1V9 151 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 C12orf77C9JDV5 145 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 M0QYV0 167 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 MYL12BO14950 172 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 CYB5BO43169 146 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 EEF1E1O43324 174 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 CRLF1O75462 422 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 NGFP01138 241 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 IGHG1P01857 330 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 C1QCP02747 245 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 EIF4EP06730 217 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 HTR1AP08908 422 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 CD1EP15812 388 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 NELFEP18615 380 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 TALDO1P37837 337 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 SERPINB10P48595 397 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 MARCKSL1P49006 195 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 GNG2P59768 71 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 C1QTNF8P60827 252 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 GTF2BQ00403 316 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 Q0VFX4 171 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 SHHQ15465 462 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 IAH1Q2TAA2 248 aaPredicted RBP4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 AKR1C8PQ5T2L2 129 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 HENMT1Q5T8I9 393 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 ANKRD22Q5VYY1 191 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 NANOGP8Q6NSW7 305 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 FBXL22Q6P050 247 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 DGAT2L6Q6ZPD8 337 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 DNM1P46Q6ZS02 220 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 FOXL2NBQ6ZUU3 175 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 NOTCH2NLQ7Z3S9 236 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 MUC15Q8N387 334 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 ZNF441Q8N8Z8 693 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 OR4D11Q8NGI4 311 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 OR9I1Q8NGQ6 314 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 FMC1Q96HJ9 113 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms