RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 FAM58AQ8N1B3 248 aa13.07□□□□□ -0.32
CHD3-215ENST00000572750 MS4A15Q8N5U1 240 aa13.07□□□□□ -0.32
CHD3-215ENST00000572750 MED30Q96HR3 178 aa13.07□□□□□ -0.32
CHD3-215ENST00000572750 RPUSD1Q9UJJ7 312 aaKnown RBP13.07□□□□□ -0.32
CHD3-215ENST00000572750 AUP1Q9Y679 476 aa13.07□□□□□ -0.32
CHD3-215ENST00000572750 HAND1O96004 215 aa13.06□□□□□ -0.32
CHD3-215ENST00000572750 MAS1P04201 325 aa13.06□□□□□ -0.32
CHD3-215ENST00000572750 CPEP16870 476 aa13.06□□□□□ -0.32
CHD3-215ENST00000572750 ZNF93P35789 620 aaPredicted RBP13.06□□□□□ -0.32
CHD3-215ENST00000572750 TGFBR2P37173 567 aa13.06□□□□□ -0.32
CHD3-215ENST00000572750 FGF12P61328 243 aa13.06□□□□□ -0.32
CHD3-215ENST00000572750 COL10A1Q03692 680 aa13.06□□□□□ -0.32
CHD3-215ENST00000572750 PAX8Q06710 450 aa13.06□□□□□ -0.32
CHD3-215ENST00000572750 GPR50Q13585 617 aa13.06□□□□□ -0.32
CHD3-215ENST00000572750 TPBGQ13641 420 aa13.06□□□□□ -0.32
CHD3-215ENST00000572750 KRTAP24-1Q3LI83 254 aa13.06□□□□□ -0.32
CHD3-215ENST00000572750 ARMCX4Q5H9R4 360 aa13.06□□□□□ -0.32
CHD3-215ENST00000572750 FIP1L1Q6UN15 594 aaKnown RBP13.06□□□□□ -0.32
CHD3-215ENST00000572750 SAXO1Q8IYX7 474 aa13.06□□□□□ -0.32
CHD3-215ENST00000572750 SPARTQ8N0X7 666 aa13.06□□□□□ -0.32
CHD3-215ENST00000572750 SVOPQ8N4V2 548 aa13.06□□□□□ -0.32
CHD3-215ENST00000572750 ZNF561Q8N587 486 aa13.06□□□□□ -0.32
CHD3-215ENST00000572750 ASCC1Q8N9N2 400 aaKnown RBP13.06□□□□□ -0.32
CHD3-215ENST00000572750 ZSCAN4Q8NAM6 433 aaPredicted RBP13.06□□□□□ -0.32
CHD3-215ENST00000572750 OR10K1Q8NGX5 313 aa13.06□□□□□ -0.32
CHD3-215ENST00000572750 THRSPQ92748 146 aa13.06□□□□□ -0.32
CHD3-215ENST00000572750 HMG20AQ9NP66 347 aa13.06□□□□□ -0.32
CHD3-215ENST00000572750 ISYNA1Q9NPH2 558 aa13.06□□□□□ -0.32
CHD3-215ENST00000572750 MRPS14O60783 128 aaKnown RBP13.05□□□□□ -0.32
CHD3-215ENST00000572750 GPX5O75715 221 aa13.05□□□□□ -0.32
CHD3-215ENST00000572750 SC5DO75845 299 aa13.05□□□□□ -0.32
CHD3-215ENST00000572750 CDRT1O95170 752 aa13.05□□□□□ -0.32
CHD3-215ENST00000572750 ECDO95905 644 aaPredicted RBP13.05□□□□□ -0.32
CHD3-215ENST00000572750 ALDOBP05062 364 aa13.05□□□□□ -0.32
CHD3-215ENST00000572750 GP2P55259 537 aaKnown RBP13.05□□□□□ -0.32
CHD3-215ENST00000572750 CAV3P56539 151 aa13.05□□□□□ -0.32
CHD3-215ENST00000572750 ZNF773Q6PK81 442 aa13.05□□□□□ -0.32
CHD3-215ENST00000572750 CEACAM19Q7Z692 300 aa13.05□□□□□ -0.32
CHD3-215ENST00000572750 JAGN1Q8N5M9 183 aa13.05□□□□□ -0.32
CHD3-215ENST00000572750 PNLDC1Q8NA58 520 aaKnown RBP13.05□□□□□ -0.32
CHD3-215ENST00000572750 DCTN5Q9BTE1 182 aa13.05□□□□□ -0.32
CHD3-215ENST00000572750 YTHDF1Q9BYJ9 559 aaKnown RBP13.05□□□□□ -0.32
CHD3-215ENST00000572750 PPIL3Q9H2H8 161 aaKnown RBP13.05□□□□□ -0.32
CHD3-215ENST00000572750 ONECUT1Q9UBC0 465 aa13.05□□□□□ -0.32
CHD3-215ENST00000572750 FOXJ3Q9UPW0 622 aa13.05□□□□□ -0.32
CHD3-215ENST00000572750 GSTK1Q9Y2Q3 226 aa13.05□□□□□ -0.32
CHD3-215ENST00000572750 IGHV3OR16-10A0A075B7F0 116 aa13.04□□□□□ -0.32
CHD3-215ENST00000572750 TRAV40A0A0B4J280 105 aa13.04□□□□□ -0.32
CHD3-215ENST00000572750 HAX1O00165 279 aa13.04□□□□□ -0.32
CHD3-215ENST00000572750 GPR37O15354 613 aa13.04□□□□□ -0.32
CHD3-215ENST00000572750 ZNF737O75373 536 aa13.04□□□□□ -0.32
CHD3-215ENST00000572750 RGS9O75916 674 aaPredicted RBP13.04□□□□□ -0.32
CHD3-215ENST00000572750 FSHBP01225 129 aa13.04□□□□□ -0.32
CHD3-215ENST00000572750 SSX1Q16384 188 aa13.04□□□□□ -0.32
CHD3-215ENST00000572750 KCTD21Q4G0X4 260 aa13.04□□□□□ -0.32
CHD3-215ENST00000572750 KLF17Q5JT82 389 aaPredicted RBP13.04□□□□□ -0.32
CHD3-215ENST00000572750 SPIN3Q5JUX0 258 aa13.04□□□□□ -0.32
CHD3-215ENST00000572750 PXT1Q8NFP0 134 aa13.04□□□□□ -0.32
CHD3-215ENST00000572750 NANPQ8TBE9 248 aa13.04□□□□□ -0.32
CHD3-215ENST00000572750 PCGF1Q9BSM1 259 aa13.04□□□□□ -0.32
CHD3-215ENST00000572750 C19orf12Q9NSK7 152 aa13.04□□□□□ -0.32
CHD3-215ENST00000572750 A0A1W2PQ09 198 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 TMEM82A0PJX8 343 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 SIRPB1O00241 398 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 TK1P04183 234 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 PPIAL4GP0DN37 164 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 IGHV4-38-2P0DP08 117 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 EPHA1P21709 976 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 GABRR1P24046 479 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 PSMB9P28065 219 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 GABRA5P31644 462 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 PTGFRP43088 359 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 FABP5Q01469 135 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 ZNF146Q15072 292 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 RSU1Q15404 277 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 C11orf91Q3C1V1 193 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 HSD17B12Q53GQ0 312 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 UBE2UQ5VVX9 321 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 UNQ9370/PRO34162Q6UXP9 181 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 TMEM91Q6ZNR0 172 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 FAM185AQ8N0U4 392 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 TEX29Q8N6K0 151 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 LY6G5BQ8NDX9 201 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 OR4M1Q8NGD0 313 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 MUL1Q969V5 352 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 UPRTQ96BW1 309 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 CHST6Q9GZX3 395 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 EXOSC4Q9NPD3 245 aaKnown RBP13.03□□□□□ -0.32
CHD3-215ENST00000572750 NDUFB11Q9NX14 153 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 SF3B6Q9Y3B4 125 aaKnown RBP13.03□□□□□ -0.32
CHD3-215ENST00000572750 LRRC42Q9Y546 428 aa13.03□□□□□ -0.32
CHD3-215ENST00000572750 DSCAML1Q8TD84 2053 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 TRBV23-1A0A0A0MS06 115 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 K7N7A8 449 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 TOX4O94842 621 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 OR2H2O95918 312 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 LIPFP07098 398 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 CHRM2P08172 466 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 UCHL1P09936 223 aa13.02□□□□□ -0.33
CHD3-215ENST00000572750 MMP9P14780 707 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms