RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 TCF19Q9Y242 345 aa14.59□□□□□ -0.07
CHD3-214ENST00000572579 TRBV2A0A0J9YWF9 115 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 hCG_1809904A0A1W2PP81 198 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 A0A1W2PPE2 198 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 A0A1W2PR64 198 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 A0A1W2PRV1 198 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 OR4C45A6NMZ5 311 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 EI24O14681 340 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 SLC16A6O15403 523 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 RBP4P02753 201 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 ISG15P05161 165 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 UBCP0CG48 685 aaKnown RBP14.58□□□□□ -0.08
CHD3-214ENST00000572579 OR3A1P47881 315 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 MTCP1P56278 107 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 SNRPGP62308 76 aaKnown RBP14.58□□□□□ -0.08
CHD3-214ENST00000572579 PDZK1IP1Q13113 114 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 ZNF146Q15072 292 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 FAM189A2Q15884 450 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 FBLN7Q53RD9 439 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 UTS2BQ765I0 119 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 GDPD3Q7L5L3 318 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 FAM58AQ8N1B3 248 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 LYG1Q8N1E2 194 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 OR13D1Q8NGV5 346 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 PP6455Q8WZ26 134 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 EMG1Q92979 244 aaKnown RBP14.58□□□□□ -0.08
CHD3-214ENST00000572579 RFKQ969G6 155 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 PELI1Q96FA3 418 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 SPACA5Q96QH8 159 aa14.58□□□□□ -0.08
CHD3-214ENST00000572579 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.58□□□□□ -0.08
CHD3-214ENST00000572579 EXOGQ9Y2C4 368 aaKnown RBP14.58□□□□□ -0.08
CHD3-214ENST00000572579 NOTCH3Q9UM47 2321 aa14.57□□□□□ -0.08
CHD3-214ENST00000572579 G3V4G9 280 aa14.57□□□□□ -0.08
CHD3-214ENST00000572579 SERPINA3P01011 423 aa14.57□□□□□ -0.08
CHD3-214ENST00000572579 VSIG10L2P0DP72 767 aa14.57□□□□□ -0.08
CHD3-214ENST00000572579 AZGP1P25311 298 aaKnown RBP14.57□□□□□ -0.08
CHD3-214ENST00000572579 POU3F4P49335 361 aa14.57□□□□□ -0.08
CHD3-214ENST00000572579 RBP2P50120 134 aa14.57□□□□□ -0.08
CHD3-214ENST00000572579 SNU13P55769 128 aaKnown RBP14.57□□□□□ -0.08
CHD3-214ENST00000572579 CDC42P60953 191 aa14.57□□□□□ -0.08
CHD3-214ENST00000572579 BLCAPP62952 87 aa14.57□□□□□ -0.08
CHD3-214ENST00000572579 MEF2CQ06413 473 aaPredicted RBP14.57□□□□□ -0.08
CHD3-214ENST00000572579 GRK1Q15835 563 aa14.57□□□□□ -0.08
CHD3-214ENST00000572579 TMEM244Q5VVB8 128 aa14.57□□□□□ -0.08
CHD3-214ENST00000572579 Q6ZTK2 550 aa14.57□□□□□ -0.08
CHD3-214ENST00000572579 RFT1Q96AA3 541 aa14.57□□□□□ -0.08
CHD3-214ENST00000572579 LGALS12Q96DT0 336 aa14.57□□□□□ -0.08
CHD3-214ENST00000572579 ZNF714Q96N38 554 aa14.57□□□□□ -0.08
CHD3-214ENST00000572579 NKX3-1Q99801 234 aaPredicted RBP14.57□□□□□ -0.08
CHD3-214ENST00000572579 CDCA4Q9BXL8 241 aa14.57□□□□□ -0.08
CHD3-214ENST00000572579 NPFFR1Q9GZQ6 430 aa14.57□□□□□ -0.08
CHD3-214ENST00000572579 ISG20L2Q9H9L3 353 aaKnown RBP14.57□□□□□ -0.08
CHD3-214ENST00000572579 HMG20AQ9NP66 347 aa14.57□□□□□ -0.08
CHD3-214ENST00000572579 TBL2Q9Y4P3 447 aaKnown RBP14.57□□□□□ -0.08
CHD3-214ENST00000572579 IGHV2-26A0A0B4J1V2 119 aa14.56□□□□□ -0.08
CHD3-214ENST00000572579 ADARB2-AS1A8MUL3 147 aa14.56□□□□□ -0.08
CHD3-214ENST00000572579 FAM90A22PA8MWA6 464 aa14.56□□□□□ -0.08
CHD3-214ENST00000572579 E9PI62 339 aa14.56□□□□□ -0.08
CHD3-214ENST00000572579 CD28P10747 220 aa14.56□□□□□ -0.08
CHD3-214ENST00000572579 GABRR1P24046 479 aa14.56□□□□□ -0.08
CHD3-214ENST00000572579 GDNFP39905 211 aa14.56□□□□□ -0.08
CHD3-214ENST00000572579 ATP1B3P54709 279 aa14.56□□□□□ -0.08
CHD3-214ENST00000572579 ACTA2P62736 377 aa14.56□□□□□ -0.08
CHD3-214ENST00000572579 ACTG2P63267 376 aa14.56□□□□□ -0.08
CHD3-214ENST00000572579 ACTC1P68032 377 aa14.56□□□□□ -0.08
CHD3-214ENST00000572579 ACTA1P68133 377 aa14.56□□□□□ -0.08
CHD3-214ENST00000572579 KPNB1Q14974 876 aaKnown RBP14.56□□□□□ -0.08
CHD3-214ENST00000572579 LIAT1Q6ZQX7 453 aa14.56□□□□□ -0.08
CHD3-214ENST00000572579 KCTD20Q7Z5Y7 419 aa14.56□□□□□ -0.08
CHD3-214ENST00000572579 OR2T6Q8NHC8 308 aa14.56□□□□□ -0.08
CHD3-214ENST00000572579 RAB18Q9NP72 206 aa14.56□□□□□ -0.08
CHD3-214ENST00000572579 MYRFQ9Y2G1 1151 aa14.56□□□□□ -0.08
CHD3-214ENST00000572579 HILPDAQ9Y5L2 63 aa14.56□□□□□ -0.08
CHD3-214ENST00000572579 LINC00312Q9Y6C7 94 aa14.56□□□□□ -0.08
CHD3-214ENST00000572579 hADV38S2A0JD32 116 aa14.55□□□□□ -0.08
CHD3-214ENST00000572579 DAPL1A0PJW8 107 aa14.55□□□□□ -0.08
CHD3-214ENST00000572579 J3QLW9 94 aa14.55□□□□□ -0.08
CHD3-214ENST00000572579 OR2H2O95918 312 aa14.55□□□□□ -0.08
CHD3-214ENST00000572579 OPN1MWP04001 364 aa14.55□□□□□ -0.08
CHD3-214ENST00000572579 OPN1MW2P0DN77 364 aa14.55□□□□□ -0.08
CHD3-214ENST00000572579 OPN1MW3P0DN78 364 aa14.55□□□□□ -0.08
CHD3-214ENST00000572579 ZNF19P17023 458 aa14.55□□□□□ -0.08
CHD3-214ENST00000572579 PRKACAP17612 351 aa14.55□□□□□ -0.08
CHD3-214ENST00000572579 PEX2P28328 305 aa14.55□□□□□ -0.08
CHD3-214ENST00000572579 CCR9P51686 369 aa14.55□□□□□ -0.08
CHD3-214ENST00000572579 DYNLT3P51808 116 aa14.55□□□□□ -0.08
CHD3-214ENST00000572579 DYNC1I2Q13409 638 aaKnown RBP14.55□□□□□ -0.08
CHD3-214ENST00000572579 CNN3Q15417 329 aaKnown RBP14.55□□□□□ -0.08
CHD3-214ENST00000572579 Q6P435 159 aa14.55□□□□□ -0.08
CHD3-214ENST00000572579 FAM220AQ7Z4H9 259 aa14.55□□□□□ -0.08
CHD3-214ENST00000572579 LHFPL3Q86UP9 236 aa14.55□□□□□ -0.08
CHD3-214ENST00000572579 CBR4Q8N4T8 237 aa14.55□□□□□ -0.08
CHD3-214ENST00000572579 OR4P4Q8NGL7 312 aa14.55□□□□□ -0.08
CHD3-214ENST00000572579 C4orf36Q96KX1 117 aa14.55□□□□□ -0.08
CHD3-214ENST00000572579 SLC29A1Q99808 456 aa14.55□□□□□ -0.08
CHD3-214ENST00000572579 WNT10AQ9GZT5 417 aa14.55□□□□□ -0.08
CHD3-214ENST00000572579 IMPAD1Q9NX62 359 aa14.55□□□□□ -0.08
CHD3-214ENST00000572579 SESN1Q9Y6P5 492 aa14.55□□□□□ -0.08
CHD3-214ENST00000572579 SIRPB1O00241 398 aa14.54□□□□□ -0.08
CHD3-214ENST00000572579 CIB2O75838 187 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms