RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 OR8B3Q8NGG8 313 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 OR10K1Q8NGX5 313 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 THRSPQ92748 146 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 EMG1Q92979 244 aaKnown RBP11.05□□□□□ -0.64
CCDC40-205ENST00000571028 NEIL1Q96FI4 390 aaPredicted RBP11.05□□□□□ -0.64
CCDC40-205ENST00000571028 OR8B2Q96RD0 313 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 PPIL3Q9H2H8 161 aaKnown RBP11.05□□□□□ -0.64
CCDC40-205ENST00000571028 SMURF1Q9HCE7 757 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 RBFOX1Q9NWB1 397 aaKnown RBP11.05□□□□□ -0.64
CCDC40-205ENST00000571028 NDUFB11Q9NX14 153 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 DUX4Q9UBX2 424 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 MIOXQ9UGB7 285 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 FOXJ3Q9UPW0 622 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 VWFP04275 2813 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 IGKV1-12A0A0C4DH73 117 aa11.04□□□□□ -0.64
CCDC40-205ENST00000571028 NKX6-3A6NJ46 265 aa11.04□□□□□ -0.64
CCDC40-205ENST00000571028 RFPL4AA6NLU0 287 aa11.04□□□□□ -0.64
CCDC40-205ENST00000571028 OR2AT4A6NND4 320 aa11.04□□□□□ -0.64
CCDC40-205ENST00000571028 RFPL4AL1F8VTS6 287 aa11.04□□□□□ -0.64
CCDC40-205ENST00000571028 CDRT1O95170 752 aa11.04□□□□□ -0.64
CCDC40-205ENST00000571028 IGKV1D-12P01611 117 aa11.04□□□□□ -0.64
CCDC40-205ENST00000571028 WNT2P09544 360 aa11.04□□□□□ -0.64
CCDC40-205ENST00000571028 UCHL1P09936 223 aa11.04□□□□□ -0.64
CCDC40-205ENST00000571028 MUC1P15941 1255 aaPredicted RBP11.04□□□□□ -0.64
CCDC40-205ENST00000571028 PRKACAP17612 351 aa11.04□□□□□ -0.64
CCDC40-205ENST00000571028 SRMP19623 302 aa11.04□□□□□ -0.64
CCDC40-205ENST00000571028 CALRP27797 417 aaKnown RBP11.04□□□□□ -0.64
CCDC40-205ENST00000571028 DUSP1P28562 367 aa11.04□□□□□ -0.64
CCDC40-205ENST00000571028 SMIM21Q3B7S5 101 aa11.04□□□□□ -0.64
CCDC40-205ENST00000571028 ESCO2Q56NI9 601 aa11.04□□□□□ -0.64
CCDC40-205ENST00000571028 SYT6Q5T7P8 510 aaPredicted RBP11.04□□□□□ -0.64
CCDC40-205ENST00000571028 TEX36Q5VZQ5 186 aa11.04□□□□□ -0.64
CCDC40-205ENST00000571028 C22orf42Q6IC83 251 aa11.04□□□□□ -0.64
CCDC40-205ENST00000571028 NLRC3Q7RTR2 1065 aa11.04□□□□□ -0.64
CCDC40-205ENST00000571028 FAM216BQ8N7L0 139 aa11.04□□□□□ -0.64
CCDC40-205ENST00000571028 PNLDC1Q8NA58 520 aaKnown RBP11.04□□□□□ -0.64
CCDC40-205ENST00000571028 MUL1Q969V5 352 aa11.04□□□□□ -0.64
CCDC40-205ENST00000571028 CPNE2Q96FN4 548 aaPredicted RBP11.04□□□□□ -0.64
CCDC40-205ENST00000571028 S100A13Q99584 98 aa11.04□□□□□ -0.64
CCDC40-205ENST00000571028 NRIP2Q9BQI9 281 aa11.04□□□□□ -0.64
CCDC40-205ENST00000571028 RASL12Q9NYN1 266 aa11.04□□□□□ -0.64
CCDC40-205ENST00000571028 CTSZQ9UBR2 303 aa11.04□□□□□ -0.64
CCDC40-205ENST00000571028 LOC100506127A0A0U1RQW1 187 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 GPX5O75715 221 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 SC5DO75845 299 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 ARL6IP5O75915 188 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 HTR3BO95264 441 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 ALDOBP05062 364 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 PSG2P11465 335 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 SELLP14151 372 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 CD36P16671 472 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 PITPNBP48739 271 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 CAPZA1P52907 286 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 ZP1P60852 638 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 GNB2P62879 340 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 SCN1BQ07699 218 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 RSU1Q15404 277 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 CRIP3Q6Q6R5 217 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 C17orf107Q6ZR85 190 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 LRRTM1Q86UE6 522 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 FAM58AQ8N1B3 248 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 FGFRL1Q8N441 504 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 ST8SIA4Q92187 359 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 CHCHD6Q9BRQ6 235 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 OR51E2Q9H255 320 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 CNTD2Q9H8S5 307 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 IL36RNQ9UBH0 155 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 SSR3Q9UNL2 185 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 GSTK1Q9Y2Q3 226 aa11.03□□□□□ -0.64
CCDC40-205ENST00000571028 AK6Q9Y3D8 172 aaKnown RBP11.03□□□□□ -0.64
CCDC40-205ENST00000571028 IGKV1D-17A0A075B6S4 117 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 TRDV1A0A1B0GX56 115 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 SMIM30A4D0T7 59 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 M0QZ24 198 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 NDUFA2O43678 99 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 NOS1APO75052 506 aaPredicted RBP11.02□□□□□ -0.65
CCDC40-205ENST00000571028 SFTPBP07988 381 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 RNASE1P07998 156 aaKnown RBP11.02□□□□□ -0.65
CCDC40-205ENST00000571028 SMIM18P0DKX4 95 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 AMY2BP19961 511 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 SERPINA2P20848 420 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 GADD45AP24522 165 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 MYL9P24844 172 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 PRDX2P32119 198 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 PTGFRP43088 359 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 ERVK11-1P61568 191 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 PDCD1Q15116 288 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 STUMQ69YW2 141 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 SLC36A1Q7Z2H8 476 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 CD177Q8N6Q3 437 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 TMEM185AQ8NFB2 350 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 GAFA1Q96PS6 74 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 SSBP3Q9BWW4 388 aaPredicted RBP11.02□□□□□ -0.65
CCDC40-205ENST00000571028 METTL9Q9H1A3 318 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 MMP27Q9H306 513 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 CLN8Q9UBY8 286 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 STUB1Q9UNE7 303 aa11.02□□□□□ -0.65
CCDC40-205ENST00000571028 MRPS28Q9Y2Q9 187 aaKnown RBP11.02□□□□□ -0.65
CCDC40-205ENST00000571028 PRKDCP78527 4128 aaKnown RBP11.01□□□□□ -0.65
CCDC40-205ENST00000571028 MEGF11A6BM72 1044 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms