RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 TRAV40A0A0B4J280 105 aa12.54□□□□□ -0.4
RAB40B-203ENST00000570676 PQLC2LA1A4F0 135 aa12.54□□□□□ -0.4
RAB40B-203ENST00000570676 DNAJC9-AS1A6NH13 148 aa12.54□□□□□ -0.4
RAB40B-203ENST00000570676 ZNF732B4DXR9 585 aa12.54□□□□□ -0.4
RAB40B-203ENST00000570676 LGALS8O00214 317 aa12.54□□□□□ -0.4
RAB40B-203ENST00000570676 TNFRSF13BO14836 293 aaPredicted RBP12.54□□□□□ -0.4
RAB40B-203ENST00000570676 PLATP00750 562 aa12.54□□□□□ -0.4
RAB40B-203ENST00000570676 EGR1P18146 543 aa12.54□□□□□ -0.4
RAB40B-203ENST00000570676 PSMD7P51665 324 aa12.54□□□□□ -0.4
RAB40B-203ENST00000570676 MTCP1P56278 107 aa12.54□□□□□ -0.4
RAB40B-203ENST00000570676 OR10A3P58181 314 aa12.54□□□□□ -0.4
RAB40B-203ENST00000570676 GNG3P63215 75 aa12.54□□□□□ -0.4
RAB40B-203ENST00000570676 MZT1Q08AG7 82 aa12.54□□□□□ -0.4
RAB40B-203ENST00000570676 GLT8D1Q68CQ7 371 aa12.54□□□□□ -0.4
RAB40B-203ENST00000570676 ZNF826PQ6ZT77 177 aa12.54□□□□□ -0.4
RAB40B-203ENST00000570676 C9orf139Q6ZV77 190 aa12.54□□□□□ -0.4
RAB40B-203ENST00000570676 JAGN1Q8N5M9 183 aa12.54□□□□□ -0.4
RAB40B-203ENST00000570676 GCSAMQ8N6F7 178 aa12.54□□□□□ -0.4
RAB40B-203ENST00000570676 GFI1Q99684 422 aa12.54□□□□□ -0.4
RAB40B-203ENST00000570676 NUDT16L1Q9BRJ7 211 aaKnown RBP12.54□□□□□ -0.4
RAB40B-203ENST00000570676 C14orf119Q9NWQ9 140 aa12.54□□□□□ -0.4
RAB40B-203ENST00000570676 C1orf123Q9NWV4 160 aa12.54□□□□□ -0.4
RAB40B-203ENST00000570676 V9GY05 133 aa12.54□□□□□ -0.4
RAB40B-203ENST00000570676 IGKV1-27A0A075B6S5 117 aa12.53□□□□□ -0.4
RAB40B-203ENST00000570676 IGHV3OR16-10A0A075B7F0 116 aa12.53□□□□□ -0.4
RAB40B-203ENST00000570676 KIR2DS1A0A191URI9 304 aa12.53□□□□□ -0.4
RAB40B-203ENST00000570676 FCN3O75636 299 aa12.53□□□□□ -0.4
RAB40B-203ENST00000570676 ZNF93P35789 620 aaPredicted RBP12.53□□□□□ -0.4
RAB40B-203ENST00000570676 ATP1B3P54709 279 aa12.53□□□□□ -0.4
RAB40B-203ENST00000570676 CAV3P56539 151 aa12.53□□□□□ -0.4
RAB40B-203ENST00000570676 KISS1Q15726 138 aa12.53□□□□□ -0.4
RAB40B-203ENST00000570676 SFRP4Q6FHJ7 346 aaPredicted RBP12.53□□□□□ -0.4
RAB40B-203ENST00000570676 RNF144BQ7Z419 303 aa12.53□□□□□ -0.4
RAB40B-203ENST00000570676 NR2C2APQ86WQ0 139 aa12.53□□□□□ -0.4
RAB40B-203ENST00000570676 CDH26Q8IXH8 852 aa12.53□□□□□ -0.4
RAB40B-203ENST00000570676 RFT1Q96AA3 541 aa12.53□□□□□ -0.4
RAB40B-203ENST00000570676 FOXRED1Q96CU9 486 aaPredicted RBP12.53□□□□□ -0.4
RAB40B-203ENST00000570676 CPNE2Q96FN4 548 aaPredicted RBP12.53□□□□□ -0.4
RAB40B-203ENST00000570676 GPER1Q99527 375 aa12.53□□□□□ -0.4
RAB40B-203ENST00000570676 NKX3-1Q99801 234 aaPredicted RBP12.53□□□□□ -0.4
RAB40B-203ENST00000570676 SMURF1Q9HCE7 757 aa12.53□□□□□ -0.4
RAB40B-203ENST00000570676 A0A0G2JK05 382 aa12.52□□□□□ -0.41
RAB40B-203ENST00000570676 OOEPA6NGQ2 149 aa12.52□□□□□ -0.41
RAB40B-203ENST00000570676 A6NLC8 198 aa12.52□□□□□ -0.41
RAB40B-203ENST00000570676 TMEM210A6NLX4 147 aa12.52□□□□□ -0.41
RAB40B-203ENST00000570676 NOTOA8MTQ0 251 aa12.52□□□□□ -0.41
RAB40B-203ENST00000570676 C3orf80F5H4A9 247 aa12.52□□□□□ -0.41
RAB40B-203ENST00000570676 LHBP01229 141 aa12.52□□□□□ -0.41
RAB40B-203ENST00000570676 GRPP07492 148 aa12.52□□□□□ -0.41
RAB40B-203ENST00000570676 ANGPTL5Q86XS5 388 aa12.52□□□□□ -0.41
RAB40B-203ENST00000570676 FAM90A1Q86YD7 464 aa12.52□□□□□ -0.41
RAB40B-203ENST00000570676 ZNF573Q86YE8 665 aa12.52□□□□□ -0.41
RAB40B-203ENST00000570676 C11orf53Q8IXP5 236 aa12.52□□□□□ -0.41
RAB40B-203ENST00000570676 BOLLQ8N9W6 283 aaKnown RBP12.52□□□□□ -0.41
RAB40B-203ENST00000570676 GCDHQ92947 438 aaPredicted RBP12.52□□□□□ -0.41
RAB40B-203ENST00000570676 SLC25A46Q96AG3 418 aa12.52□□□□□ -0.41
RAB40B-203ENST00000570676 OR51I2Q9H344 312 aa12.52□□□□□ -0.41
RAB40B-203ENST00000570676 PLGRKTQ9HBL7 147 aa12.52□□□□□ -0.41
RAB40B-203ENST00000570676 SOX21Q9Y651 276 aaPredicted RBP12.52□□□□□ -0.41
RAB40B-203ENST00000570676 ENSAO43768 121 aaKnown RBP12.51□□□□□ -0.41
RAB40B-203ENST00000570676 CD37P11049 281 aa12.51□□□□□ -0.41
RAB40B-203ENST00000570676 PRTN3P24158 256 aa12.51□□□□□ -0.41
RAB40B-203ENST00000570676 HAAOP46952 286 aa12.51□□□□□ -0.41
RAB40B-203ENST00000570676 POU3F4P49335 361 aa12.51□□□□□ -0.41
RAB40B-203ENST00000570676 NPY4RP50391 375 aa12.51□□□□□ -0.41
RAB40B-203ENST00000570676 FGF12P61328 243 aa12.51□□□□□ -0.41
RAB40B-203ENST00000570676 KCNJ8Q15842 424 aa12.51□□□□□ -0.41
RAB40B-203ENST00000570676 AWAT1Q58HT5 328 aa12.51□□□□□ -0.41
RAB40B-203ENST00000570676 HES5Q5TA89 166 aa12.51□□□□□ -0.41
RAB40B-203ENST00000570676 TEX36Q5VZQ5 186 aa12.51□□□□□ -0.41
RAB40B-203ENST00000570676 SFXN4Q6P4A7 337 aa12.51□□□□□ -0.41
RAB40B-203ENST00000570676 HAGHLQ6PII5 290 aaPredicted RBP12.51□□□□□ -0.41
RAB40B-203ENST00000570676 CRIP3Q6Q6R5 217 aa12.51□□□□□ -0.41
RAB40B-203ENST00000570676 LYPD6Q86Y78 171 aa12.51□□□□□ -0.41
RAB40B-203ENST00000570676 PNLDC1Q8NA58 520 aaKnown RBP12.51□□□□□ -0.41
RAB40B-203ENST00000570676 OR5D18Q8NGL1 313 aa12.51□□□□□ -0.41
RAB40B-203ENST00000570676 DYNC2LI1Q8TCX1 351 aa12.51□□□□□ -0.41
RAB40B-203ENST00000570676 DUX5Q96PT3 197 aa12.51□□□□□ -0.41
RAB40B-203ENST00000570676 UQCC2Q9BRT2 126 aa12.51□□□□□ -0.41
RAB40B-203ENST00000570676 DCUN1D5Q9BTE7 237 aa12.51□□□□□ -0.41
RAB40B-203ENST00000570676 MS4A7Q9GZW8 240 aaPredicted RBP12.51□□□□□ -0.41
RAB40B-203ENST00000570676 TLNRD1Q9H1K6 362 aa12.51□□□□□ -0.41
RAB40B-203ENST00000570676 CNTD2Q9H8S5 307 aa12.51□□□□□ -0.41
RAB40B-203ENST00000570676 ZMAT3Q9HA38 289 aaKnown RBP12.51□□□□□ -0.41
RAB40B-203ENST00000570676 TENM1Q9UKZ4 2725 aa12.5□□□□□ -0.41
RAB40B-203ENST00000570676 TRAV38-1A0A0B4J264 116 aa12.5□□□□□ -0.41
RAB40B-203ENST00000570676 hCG_1807616A0A1W2PRN6 198 aa12.5□□□□□ -0.41
RAB40B-203ENST00000570676 IFITM5A6NNB3 132 aa12.5□□□□□ -0.41
RAB40B-203ENST00000570676 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.5□□□□□ -0.41
RAB40B-203ENST00000570676 AIPO00170 330 aa12.5□□□□□ -0.41
RAB40B-203ENST00000570676 SLC17A2O00624 439 aa12.5□□□□□ -0.41
RAB40B-203ENST00000570676 ADAM20O43506 726 aa12.5□□□□□ -0.41
RAB40B-203ENST00000570676 TMEM225BP0DP42 221 aa12.5□□□□□ -0.41
RAB40B-203ENST00000570676 ZNF182P17025 639 aaPredicted RBP12.5□□□□□ -0.41
RAB40B-203ENST00000570676 HTR2CP28335 458 aa12.5□□□□□ -0.41
RAB40B-203ENST00000570676 OR3A4PP47883 348 aa12.5□□□□□ -0.41
RAB40B-203ENST00000570676 RORCP51449 518 aa12.5□□□□□ -0.41
RAB40B-203ENST00000570676 RAB11BQ15907 218 aa12.5□□□□□ -0.41
RAB40B-203ENST00000570676 FAM76BQ5HYJ3 339 aa12.5□□□□□ -0.41
RAB40B-203ENST00000570676 C1orf100Q5SVJ3 147 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms