RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 SHDQ96IW2 340 aa13.35□□□□□ -0.27
USP43-202ENST00000570475 CHST5Q9GZS9 411 aa13.35□□□□□ -0.27
USP43-202ENST00000570475 NAA60Q9H7X0 242 aa13.35□□□□□ -0.27
USP43-202ENST00000570475 OR2C1O95371 312 aa13.35□□□□□ -0.27
USP43-202ENST00000570475 AADACP22760 399 aa13.35□□□□□ -0.27
USP43-202ENST00000570475 TAGLN2P37802 199 aaKnown RBP13.35□□□□□ -0.27
USP43-202ENST00000570475 NKX2-1P43699 371 aaPredicted RBP13.35□□□□□ -0.27
USP43-202ENST00000570475 SULT1A2P50226 295 aa13.35□□□□□ -0.27
USP43-202ENST00000570475 ZNF133P52736 654 aaPredicted RBP13.35□□□□□ -0.27
USP43-202ENST00000570475 UBE2KP61086 200 aa13.35□□□□□ -0.27
USP43-202ENST00000570475 IZUMO4Q1ZYL8 232 aa13.35□□□□□ -0.27
USP43-202ENST00000570475 OSR2Q8N2R0 312 aa13.35□□□□□ -0.27
USP43-202ENST00000570475 OR6S1Q8NH40 331 aa13.35□□□□□ -0.27
USP43-202ENST00000570475 HIST1H2AAQ96QV6 131 aa13.35□□□□□ -0.27
USP43-202ENST00000570475 NKX2-6A6NCS4 301 aa13.35□□□□□ -0.27
USP43-202ENST00000570475 H7C1Q1 480 aa13.35□□□□□ -0.27
USP43-202ENST00000570475 AKR1C8PQ5T2L2 129 aa13.35□□□□□ -0.27
USP43-202ENST00000570475 GPR157Q5UAW9 335 aa13.35□□□□□ -0.27
USP43-202ENST00000570475 MARS2Q96GW9 593 aaKnown RBP13.35□□□□□ -0.27
USP43-202ENST00000570475 ABHD14AQ9BUJ0 271 aa13.35□□□□□ -0.27
USP43-202ENST00000570475 BCO1Q9HAY6 547 aa13.35□□□□□ -0.27
USP43-202ENST00000570475 KCNS2Q9ULS6 477 aa13.35□□□□□ -0.27
USP43-202ENST00000570475 DEDDO75618 318 aa13.34□□□□□ -0.27
USP43-202ENST00000570475 KIAA0141Q14154 515 aaPredicted RBP13.34□□□□□ -0.27
USP43-202ENST00000570475 NAT6Q93015 286 aa13.34□□□□□ -0.27
USP43-202ENST00000570475 SPSB2Q99619 263 aa13.34□□□□□ -0.27
USP43-202ENST00000570475 CALHM2Q9HA72 323 aa13.34□□□□□ -0.27
USP43-202ENST00000570475 IGHV5-10-1A0A0J9YXX1 117 aa13.34□□□□□ -0.27
USP43-202ENST00000570475 A0A1W2PR80 420 aa13.34□□□□□ -0.27
USP43-202ENST00000570475 ZFP92A6NM28 416 aa13.34□□□□□ -0.27
USP43-202ENST00000570475 ZNF724A8MTY0 619 aa13.34□□□□□ -0.27
USP43-202ENST00000570475 HAAOP46952 286 aa13.34□□□□□ -0.27
USP43-202ENST00000570475 SLC35G3Q8N808 338 aa13.34□□□□□ -0.27
USP43-202ENST00000570475 FER1L5A0AVI2 2057 aa13.34□□□□□ -0.27
USP43-202ENST00000570475 ARPC4-TTLL3A0A0A6YYG9 625 aa13.34□□□□□ -0.27
USP43-202ENST00000570475 A0A1W2PPE3 182 aa13.34□□□□□ -0.27
USP43-202ENST00000570475 TK1P04183 234 aa13.34□□□□□ -0.27
USP43-202ENST00000570475 CTSDP07339 412 aaPredicted RBP13.34□□□□□ -0.27
USP43-202ENST00000570475 CCDC71LQ8N9Z2 235 aa13.34□□□□□ -0.27
USP43-202ENST00000570475 TWSG1Q9GZX9 223 aa13.34□□□□□ -0.27
USP43-202ENST00000570475 PLEKHA2Q9HB19 425 aa13.34□□□□□ -0.27
USP43-202ENST00000570475 EIF1BO60739 113 aaKnown RBP13.33□□□□□ -0.28
USP43-202ENST00000570475 TCN2P20062 427 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 CHATP28329 748 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 NPBWR2P48146 333 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 RPS16P62249 146 aaKnown RBP13.33□□□□□ -0.28
USP43-202ENST00000570475 ENDOGQ14249 297 aaKnown RBP13.33□□□□□ -0.28
USP43-202ENST00000570475 MYPOPQ86VE0 399 aaPredicted RBP13.33□□□□□ -0.28
USP43-202ENST00000570475 OR10AD1Q8NGE0 317 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 OR1F12Q8NHA8 337 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 CARHSP1Q9Y2V2 147 aaKnown RBP13.33□□□□□ -0.28
USP43-202ENST00000570475 FREM1Q5H8C1 2179 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 DOCK10Q96BY6 2186 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 SHISA7A6NL88 538 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 FABP1P07148 127 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 FCGR3AP08637 254 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 LYSMD4Q5XG99 296 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 LCN15Q6UWW0 184 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 OR5C1Q8NGR4 320 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 TCTEX1D2Q8WW35 142 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 HIST1H2BAQ96A08 127 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 CPNE4Q96A23 557 aaPredicted RBP13.33□□□□□ -0.28
USP43-202ENST00000570475 GHRLQ9UBU3 117 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 NUDT19A8MXV4 375 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 LINC01387J3KSC0 135 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 ADAM20O43506 726 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 SULT1A1P50225 295 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 GPM6AP51674 278 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 TSC22D1Q15714 1073 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 ZNF528Q3MIS6 628 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 ZNF468Q5VIY5 522 aaPredicted RBP13.33□□□□□ -0.28
USP43-202ENST00000570475 LYPD6Q86Y78 171 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 ZNF611Q8N823 705 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 ABHD3Q8WU67 409 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 PHF7Q9BWX1 381 aaPredicted RBP13.33□□□□□ -0.28
USP43-202ENST00000570475 LIME1Q9H400 295 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 PNRC2Q9NPJ4 139 aaKnown RBP13.33□□□□□ -0.28
USP43-202ENST00000570475 LIPGQ9Y5X9 500 aa13.33□□□□□ -0.28
USP43-202ENST00000570475 A0A1W2PNV4 684 aa13.32□□□□□ -0.28
USP43-202ENST00000570475 PMS2P1A4D2B8 440 aa13.32□□□□□ -0.28
USP43-202ENST00000570475 YIF1AO95070 293 aa13.32□□□□□ -0.28
USP43-202ENST00000570475 H2AFB1P0C5Y9 115 aa13.32□□□□□ -0.28
USP43-202ENST00000570475 CFPP27918 469 aa13.32□□□□□ -0.28
USP43-202ENST00000570475 S100A2P29034 98 aa13.32□□□□□ -0.28
USP43-202ENST00000570475 SPEM2Q0P670 501 aa13.32□□□□□ -0.28
USP43-202ENST00000570475 CXorf66Q5JRM2 361 aaPredicted RBP13.32□□□□□ -0.28
USP43-202ENST00000570475 HMGB3O15347 200 aaKnown RBP13.32□□□□□ -0.28
USP43-202ENST00000570475 ZNF92Q03936 586 aa13.32□□□□□ -0.28
USP43-202ENST00000570475 SRSF4Q08170 494 aaKnown RBP13.32□□□□□ -0.28
USP43-202ENST00000570475 HIST2H3AQ71DI3 136 aa13.32□□□□□ -0.28
USP43-202ENST00000570475 MRPL21Q7Z2W9 205 aaKnown RBP13.32□□□□□ -0.28
USP43-202ENST00000570475 S100PBPQ96BU1 408 aa13.32□□□□□ -0.28
USP43-202ENST00000570475 WFDC1Q9HC57 220 aa13.32□□□□□ -0.28
USP43-202ENST00000570475 PRF1P14222 555 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 MDKP21741 143 aaPredicted RBP13.31□□□□□ -0.28
USP43-202ENST00000570475 MRPS34P82930 218 aaKnown RBP13.31□□□□□ -0.28
USP43-202ENST00000570475 ZNF561Q8N587 486 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 CADM4Q8NFZ8 388 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 SMIM8Q96KF7 97 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 PARP11Q9NR21 331 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms