RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 ZNF702PQ9H963 129 aa11.19□□□□□ -0.62
GTF3C1-211ENST00000569653 EXOGQ9Y2C4 368 aaKnown RBP11.19□□□□□ -0.62
GTF3C1-211ENST00000569653 POLDIP2Q9Y2S7 368 aa11.19□□□□□ -0.62
GTF3C1-211ENST00000569653 RRP15Q9Y3B9 282 aaKnown RBP11.19□□□□□ -0.62
GTF3C1-211ENST00000569653 LOC107986453A0A1B0GWG9 222 aa11.18□□□□□ -0.62
GTF3C1-211ENST00000569653 SYT7O43581 403 aa11.18□□□□□ -0.62
GTF3C1-211ENST00000569653 CLIC3O95833 236 aa11.18□□□□□ -0.62
GTF3C1-211ENST00000569653 FADS2O95864 444 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-211ENST00000569653 IGHA1P01876 353 aa11.18□□□□□ -0.62
GTF3C1-211ENST00000569653 RAB40BQ12829 278 aa11.18□□□□□ -0.62
GTF3C1-211ENST00000569653 AANATQ16613 207 aa11.18□□□□□ -0.62
GTF3C1-211ENST00000569653 TTC23Q5W5X9 447 aa11.18□□□□□ -0.62
GTF3C1-211ENST00000569653 Q6ZS46 218 aa11.18□□□□□ -0.62
GTF3C1-211ENST00000569653 KLHDC1Q8N7A1 406 aa11.18□□□□□ -0.62
GTF3C1-211ENST00000569653 TPRX1Q8N7U7 411 aa11.18□□□□□ -0.62
GTF3C1-211ENST00000569653 WIPF2Q8TF74 440 aaPredicted RBP11.18□□□□□ -0.62
GTF3C1-211ENST00000569653 LGALS12Q96DT0 336 aa11.18□□□□□ -0.62
GTF3C1-211ENST00000569653 ADAT3Q96EY9 351 aaPredicted RBP11.18□□□□□ -0.62
GTF3C1-211ENST00000569653 ADI1Q9BV57 179 aa11.18□□□□□ -0.62
GTF3C1-211ENST00000569653 CHST5Q9GZS9 411 aa11.18□□□□□ -0.62
GTF3C1-211ENST00000569653 FAM234AQ9H0X4 552 aa11.18□□□□□ -0.62
GTF3C1-211ENST00000569653 INPP5EQ9NRR6 644 aa11.18□□□□□ -0.62
GTF3C1-211ENST00000569653 SERTAD4Q9NUC0 356 aa11.18□□□□□ -0.62
GTF3C1-211ENST00000569653 RPL36Q9Y3U8 105 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-211ENST00000569653 VGLL3A8MV65 326 aa11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 PSPNO60542 156 aa11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 MMP23AO75900 390 aa11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 CALCBP10092 127 aa11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 DUSP1P28562 367 aa11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 NPBWR2P48146 333 aa11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 NANOS3P60323 173 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 HERPUD1Q15011 391 aa11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 KLHL22Q53GT1 634 aa11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 FBLN7Q53RD9 439 aa11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 ZNF691Q5VV52 312 aa11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 ZNF626Q68DY1 528 aa11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 BAIAP2L2Q6UXY1 529 aa11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 SLC25A26Q70HW3 274 aa11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 TMEM219Q86XT9 240 aa11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 LYG1Q8N1E2 194 aa11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 ASCC1Q8N9N2 400 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 SETD9Q8NE22 299 aa11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 OR10AC1Q8NH08 325 aa11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 APH1BQ8WW43 257 aa11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 CYGBQ8WWM9 190 aa11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 CEP19Q96LK0 163 aa11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 ALG8Q9BVK2 526 aa11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 VCXQ9H320 206 aa11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 HEXA-AS1Q9H8Q6 139 aa11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 RBFOX1Q9NWB1 397 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-211ENST00000569653 IGKV1-12A0A0C4DH73 117 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 A6NDX4 124 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 ADARB2-AS1A8MUL3 147 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 G3V4G9 280 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 IGKV1D-12P01611 117 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 HTR1AP08908 422 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 GNAO1P09471 354 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 CSF1P09603 554 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 ZNF728P0DKX0 622 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 IGHV1-8P0DP01 117 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 OR12D2P58182 307 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 GALEQ14376 348 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 C2orf68Q2NKX9 166 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 UTF1Q5T230 341 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 TMEM244Q5VVB8 128 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 EGFL6Q8IUX8 553 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 OR8H2Q8N162 312 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 OR11H6Q8NGC7 330 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 OR4C13Q8NGP0 309 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 OR2G2Q8NGZ5 317 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 C10orf35Q96D05 121 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 C4orf36Q96KX1 117 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 CHST6Q9GZX3 395 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 RANBP3Q9H6Z4 567 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 AMBNQ9NP70 447 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 TCF19Q9Y242 345 aa11.16□□□□□ -0.62
GTF3C1-211ENST00000569653 IRGMA1A4Y4 181 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 J3QLW9 94 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 WBP4O75554 376 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 GATBO75879 557 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 ARG1P05089 322 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 ISG15P05161 165 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 ZNF19P17023 458 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 BCL3P20749 454 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 CCR9P51686 369 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 AQP4P55087 323 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 EDDM3BP56851 147 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 MRPL28Q13084 256 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 IL18R1Q13478 541 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 EDDM3AQ14507 147 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 BEAN1Q3B7T3 259 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 TMEM95Q3KNT9 176 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 FDX2Q6P4F2 183 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 LHFPL3Q86UP9 236 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 Q8N2B8 174 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 SYS1Q8N2H4 156 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 DHRSXQ8N5I4 330 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 OR4S1Q8NGB4 309 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 OR51A4Q8NGJ6 313 aa11.15□□□□□ -0.62
GTF3C1-211ENST00000569653 HAVCR2Q8TDQ0 301 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms