RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 IGKV1-12A0A0C4DH73 117 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 A0A1W2PPH5 198 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 ANGPTL7O43827 346 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 ZNF737O75373 536 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 KDM4BO94953 1096 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 IGKV1D-12P01611 117 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 IGHV1-69P01742 117 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 CDK1P06493 297 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 PRKACAP17612 351 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 HSPA13P48723 471 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 BAMBIQ13145 260 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 SPIN3Q5JUX0 258 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 RUSC1-AS1Q66K80 236 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 FAM185AQ8N0U4 392 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 ZFP41Q8N8Y5 198 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 OR5D18Q8NGL1 313 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 OR5D13Q8NGL4 314 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 SNX22Q96L94 193 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 PGLYRP3Q96LB9 341 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 ANKRD60Q9BZ19 345 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 PRDM13Q9H4Q3 707 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 UNKLQ9H9P5 680 aaKnown RBP11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 HMG20AQ9NP66 347 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 SIRT7Q9NRC8 400 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 C19orf12Q9NSK7 152 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 TAS2R4Q9NYW5 299 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 TPRKBQ9Y3C4 175 aa11.35□□□□□ -0.59
HERPUD1-218ENST00000569569 TRBV5-5A0A0J9YX44 114 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 ATP6V1G2O95670 118 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 HAND1O96004 215 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 ALDOBP05062 364 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 CD1AP06126 327 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 TMEM225BP0DP42 221 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 PRTN3P24158 256 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 ZP1P60852 638 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 UBA52P62987 128 aaKnown RBP11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 GUCA2AQ02747 115 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 DEFB112Q30KQ8 113 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 Q499Y3 187 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 TMEM200BQ69YZ2 307 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 ASPHD2Q6ICH7 369 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 IZUMO2Q6UXV1 221 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 SATL1Q86VE3 508 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 PDZD9Q8IXQ8 264 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 OR8H2Q8N162 312 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 OR4M1Q8NGD0 313 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 OR51A2Q8NGJ7 313 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 ZDHHC16Q969W1 377 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 GPER1Q99527 375 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 CDCA4Q9BXL8 241 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 METTL8Q9H825 291 aaKnown RBP11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 ZMAT3Q9HA38 289 aaKnown RBP11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 NOX4Q9NPH5 578 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 IL36RNQ9UBH0 155 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 GSTK1Q9Y2Q3 226 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 PCDHGB5Q9Y5G0 923 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 STAB1Q9NY15 2570 aa11.34□□□□□ -0.59
HERPUD1-218ENST00000569569 PNMA8CA0A1B0GUJ8 204 aa11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 TMEM82A0PJX8 343 aa11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 DNAJC9-AS1A6NH13 148 aa11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 SH2D1BO14796 132 aa11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 CALCBP10092 127 aa11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 CELP19835 753 aa11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 EEF1B2P24534 225 aaKnown RBP11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 DUSP1P28562 367 aa11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 RPS11P62280 158 aaKnown RBP eCLIP11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 PPP3R1P63098 170 aa11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 SLC35A2P78381 396 aa11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 BDH1Q02338 343 aa11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 ACSM1Q08AH1 577 aa11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 NCR3LG1Q68D85 454 aa11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 C17orf107Q6ZR85 190 aa11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 GDPD3Q7L5L3 318 aa11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 PXT1Q8NFP0 134 aa11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 OR52N4Q8NGI2 321 aa11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 OR13C5Q8NGS8 318 aa11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 PPP1R35Q8TAP8 253 aa11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 TNFRSF14Q92956 283 aa11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 C1orf147Q96MC9 270 aaPredicted RBP11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 MND1Q9BWT6 205 aa11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 TMEM138Q9NPI0 162 aa11.33□□□□□ -0.6
HERPUD1-218ENST00000569569 MDFIC2A0A1B0GVS7 189 aa11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 hCG_1809904A0A1W2PP81 198 aa11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 A0A1W2PPE2 198 aa11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 A0A1W2PR64 198 aa11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 A0A1W2PRV1 198 aa11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 RNASEK-C17orf49H0YIS7 233 aa11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 CLDN34H7C241 214 aa11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 GPX5O75715 221 aa11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 IGFBP3P17936 291 aaPredicted RBP11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 GABRR1P24046 479 aa11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 LMO1P25800 156 aa11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 BDKRB2P30411 391 aa11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 MTNR1BP49286 362 aa11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 BMXP51813 675 aa11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 UBE2E1P51965 193 aa11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 SNU13P55769 128 aaKnown RBP11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 EDDM3BP56851 147 aa11.32□□□□□ -0.6
HERPUD1-218ENST00000569569 SLC9A3R2Q15599 337 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms