RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 OR4D6Q8NGJ1 314 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 MCFD2Q8NI22 146 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 ZNF431Q8TF32 576 aaPredicted RBP3.98□□□□□ -1.77
UBR1-208ENST00000569066 SRRQ9GZT4 340 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 OR2AG1Q9H205 316 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 RETNQ9HD89 108 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 MED11Q9P086 117 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 PCF11O94913 1555 aaKnown RBP3.98□□□□□ -1.77
UBR1-208ENST00000569066 CDK5RAP2Q96SN8 1893 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 ZNF609O15014 1411 aa3.98□□□□□ -1.77
UBR1-208ENST00000569066 KLRC4-KLRK1H3BQV0 150 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 GKN3PP0CG01 181 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 TGM4P49221 684 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 CRYBA4P53673 196 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 TIMM10P62072 90 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 NCS1P62166 190 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 PRKCDQ05655 676 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 PRPSAP1Q14558 356 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 WDFY1Q8IWB7 410 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 DCAF4L2Q8NA75 395 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 VN1R2Q8NFZ6 395 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 OR11L1Q8NGX0 322 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 OR5K1Q8NHB7 308 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 ABHD3Q8WU67 409 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 ACOT12Q8WYK0 555 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 HGDQ93099 445 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 VPS25Q9BRG1 176 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 C7orf50Q9BRJ6 194 aaKnown RBP3.97□□□□□ -1.77
UBR1-208ENST00000569066 LXNQ9BS40 222 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 ANGPTL4Q9BY76 406 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 OR11A1Q9GZK7 315 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 IMP3Q9NV31 184 aaKnown RBP3.97□□□□□ -1.77
UBR1-208ENST00000569066 SMPXQ9UHP9 88 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 TP53TG3Q9ULZ0 132 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 ING4Q9UNL4 249 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 TRAPPC4Q9Y296 219 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 PRG3Q9Y2Y8 225 aaPredicted RBP3.97□□□□□ -1.77
UBR1-208ENST00000569066 CC2D2AQ9P2K1 1620 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 ARHGEF5Q12774 1597 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 ASTN1O14525 1302 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 IFT172Q9UG01 1749 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 A0A1B0GW15 77 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 FABP12A6NFH5 140 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 GPR31O00270 319 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 CXCR6O00574 342 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 PMP2P02689 132 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 METTL15P1P0C7V9 234 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 HLA-EP13747 358 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 IDH3GP51553 393 aaPredicted RBP3.97□□□□□ -1.77
UBR1-208ENST00000569066 MAB21L1Q13394 359 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 EIF4EBP2Q13542 120 aaPredicted RBP3.97□□□□□ -1.77
UBR1-208ENST00000569066 QPRTQ15274 297 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 GUCA2BQ16661 112 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 LGALSLQ3ZCW2 172 aaPredicted RBP3.97□□□□□ -1.77
UBR1-208ENST00000569066 APOBEC3HQ6NTF7 200 aaKnown RBP3.97□□□□□ -1.77
UBR1-208ENST00000569066 LRRN1Q6UXK5 716 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 CASP12Q6UXS9 341 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 OR2T4Q8NH00 348 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 OR5J2Q8NH18 312 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 STACQ99469 402 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 DDA1Q9BW61 102 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 ZNF436Q9C0F3 470 aaPredicted RBP3.97□□□□□ -1.77
UBR1-208ENST00000569066 SLC7A11Q9UPY5 501 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 ABCC10Q5T3U5 1492 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 PIKFYVEQ9Y2I7 2098 aa3.97□□□□□ -1.77
UBR1-208ENST00000569066 BCL9LQ86UU0 1499 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 A0A1B0GVI7 797 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 A0A1W2PQL4 384 aaPredicted RBP3.96□□□□□ -1.78
UBR1-208ENST00000569066 ANKRD63C9JTQ0 380 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 ZNF861PO60384 105 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 BCKDHBP21953 392 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 RBM34P42696 430 aaKnown RBP3.96□□□□□ -1.78
UBR1-208ENST00000569066 UQCRFS1P47985 274 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 CEBPGP53567 150 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 GOLGA7BQ2TAP0 167 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 ZNF404Q494X3 552 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 TPRG1LQ5T0D9 272 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 C22orf42Q6IC83 251 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 MED27Q6P2C8 311 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 BOD1L2Q8IYS8 172 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 UBAC2Q8NBM4 344 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 ST6GALNAC3Q8NDV1 305 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 OR2D3Q8NGH3 330 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 OR4K15Q8NH41 348 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 TSEN15Q8WW01 171 aaKnown RBP3.96□□□□□ -1.78
UBR1-208ENST00000569066 RBBP8Q99708 897 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 APOL4Q9BPW4 351 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 ADAT1Q9BUB4 502 aaKnown RBP3.96□□□□□ -1.78
UBR1-208ENST00000569066 FAM96AQ9H5X1 160 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 RNF122Q9H9V4 155 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 ANKHQ9HCJ1 492 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 F11RQ9Y624 299 aaKnown RBP3.96□□□□□ -1.78
UBR1-208ENST00000569066 BICRAQ9NZM4 1560 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 MAST1Q9Y2H9 1570 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 ASXL1Q8IXJ9 1541 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 KIAA0586Q9BVV6 1533 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 ADCY10Q96PN6 1610 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 A0A0A6YYH2 397 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 A0A0J9YYE9 177 aa3.96□□□□□ -1.78
UBR1-208ENST00000569066 ZNF816-ZNF321PA0A0X1KG74 233 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms