RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 C2orf68Q2NKX9 166 aa11.53□□□□□ -0.56
COMMD4-216ENST00000567023 TP53I3Q53FA7 332 aa11.53□□□□□ -0.56
COMMD4-216ENST00000567023 LPCAT4Q643R3 524 aa11.53□□□□□ -0.56
COMMD4-216ENST00000567023 ZNF626Q68DY1 528 aa11.53□□□□□ -0.56
COMMD4-216ENST00000567023 ZNF782Q6ZMW2 699 aaPredicted RBP11.53□□□□□ -0.56
COMMD4-216ENST00000567023 TCF23Q7RTU1 214 aa11.53□□□□□ -0.56
COMMD4-216ENST00000567023 LHFPL4Q7Z7J7 247 aa11.53□□□□□ -0.56
COMMD4-216ENST00000567023 OR4C13Q8NGP0 309 aa11.53□□□□□ -0.56
COMMD4-216ENST00000567023 CFHR4Q92496 578 aa11.53□□□□□ -0.56
COMMD4-216ENST00000567023 ADAT3Q96EY9 351 aaPredicted RBP11.53□□□□□ -0.56
COMMD4-216ENST00000567023 TGP01266 2768 aa11.53□□□□□ -0.56
COMMD4-216ENST00000567023 TRBV2A0A0J9YWF9 115 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 hADV38S2A0JD32 116 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 CHST1O43916 411 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 MPZL2O60487 215 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 TSPAN15O95858 294 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 HAND1O96004 215 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 MT-ND2P03891 347 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 PRKACBP22694 351 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 NPBWR2P48146 333 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 MTCP1P56278 107 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 EDDM3BP56851 147 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 OR12D2P58182 307 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 NANOS3P60323 173 aaKnown RBP11.52□□□□□ -0.57
COMMD4-216ENST00000567023 ZNF91Q05481 1191 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 HERPUD1Q15011 391 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 SPIN3Q5JUX0 258 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 LDLRAD2Q5SZI1 272 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 OGFRL1Q5TC84 451 aaPredicted RBP11.52□□□□□ -0.57
COMMD4-216ENST00000567023 FAM58AQ8N1B3 248 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 DYNAPQ8N1N2 210 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 ACBD7Q8N6N7 88 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 OR52N4Q8NGI2 321 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 OR2T6Q8NHC8 308 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 EMG1Q92979 244 aaKnown RBP11.52□□□□□ -0.57
COMMD4-216ENST00000567023 SPSB1Q96BD6 273 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 FOXRED1Q96CU9 486 aaPredicted RBP11.52□□□□□ -0.57
COMMD4-216ENST00000567023 RNFT2Q96EX2 444 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 ZNF714Q96N38 554 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 NPFFR1Q9GZQ6 430 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 DCLRE1BQ9H816 532 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 EXOGQ9Y2C4 368 aaKnown RBP11.52□□□□□ -0.57
COMMD4-216ENST00000567023 LINC00312Q9Y6C7 94 aa11.52□□□□□ -0.57
COMMD4-216ENST00000567023 DAPL1A0PJW8 107 aa11.51□□□□□ -0.57
COMMD4-216ENST00000567023 ERICH4A6NGS2 130 aa11.51□□□□□ -0.57
COMMD4-216ENST00000567023 SNTNA6NMZ2 147 aa11.51□□□□□ -0.57
COMMD4-216ENST00000567023 PSPNO60542 156 aa11.51□□□□□ -0.57
COMMD4-216ENST00000567023 CYB5AP00167 134 aa11.51□□□□□ -0.57
COMMD4-216ENST00000567023 IGHA1P01876 353 aa11.51□□□□□ -0.57
COMMD4-216ENST00000567023 ARG1P05089 322 aa11.51□□□□□ -0.57
COMMD4-216ENST00000567023 ATF1P18846 271 aa11.51□□□□□ -0.57
COMMD4-216ENST00000567023 AZGP1P25311 298 aaKnown RBP11.51□□□□□ -0.57
COMMD4-216ENST00000567023 ERP29P30040 261 aaKnown RBP11.51□□□□□ -0.57
COMMD4-216ENST00000567023 DYNLT3P51808 116 aa11.51□□□□□ -0.57
COMMD4-216ENST00000567023 PDZK1IP1Q13113 114 aa11.51□□□□□ -0.57
COMMD4-216ENST00000567023 LRRC36Q1X8D7 754 aa11.51□□□□□ -0.57
COMMD4-216ENST00000567023 Q6ZTK2 550 aa11.51□□□□□ -0.57
COMMD4-216ENST00000567023 LHFPL2Q6ZUX7 228 aa11.51□□□□□ -0.57
COMMD4-216ENST00000567023 Q8N2B8 174 aa11.51□□□□□ -0.57
COMMD4-216ENST00000567023 APH1BQ8WW43 257 aa11.51□□□□□ -0.57
COMMD4-216ENST00000567023 FGGYQ96C11 551 aa11.51□□□□□ -0.57
COMMD4-216ENST00000567023 RBFOX1Q9NWB1 397 aaKnown RBP11.51□□□□□ -0.57
COMMD4-216ENST00000567023 IL36RNQ9UBH0 155 aa11.51□□□□□ -0.57
COMMD4-216ENST00000567023 AASSQ9UDR5 926 aa11.51□□□□□ -0.57
COMMD4-216ENST00000567023 TCF19Q9Y242 345 aa11.51□□□□□ -0.57
COMMD4-216ENST00000567023 SIGLEC9Q9Y336 463 aa11.51□□□□□ -0.57
COMMD4-216ENST00000567023 OR4C45A6NMZ5 311 aa11.5□□□□□ -0.57
COMMD4-216ENST00000567023 MGST3O14880 152 aa11.5□□□□□ -0.57
COMMD4-216ENST00000567023 INMTO95050 263 aa11.5□□□□□ -0.57
COMMD4-216ENST00000567023 CSF1P09603 554 aa11.5□□□□□ -0.57
COMMD4-216ENST00000567023 BCL3P20749 454 aa11.5□□□□□ -0.57
COMMD4-216ENST00000567023 LMO1P25800 156 aa11.5□□□□□ -0.57
COMMD4-216ENST00000567023 ACTA2P62736 377 aa11.5□□□□□ -0.57
COMMD4-216ENST00000567023 ACTG2P63267 376 aa11.5□□□□□ -0.57
COMMD4-216ENST00000567023 ADARB1P78563 741 aaKnown RBP11.5□□□□□ -0.57
COMMD4-216ENST00000567023 GRK1Q15835 563 aa11.5□□□□□ -0.57
COMMD4-216ENST00000567023 SSX2Q16385 188 aa11.5□□□□□ -0.57
COMMD4-216ENST00000567023 MINOS1Q5TGZ0 78 aa11.5□□□□□ -0.57
COMMD4-216ENST00000567023 CCBE1Q6UXH8 406 aaPredicted RBP11.5□□□□□ -0.57
COMMD4-216ENST00000567023 ZNF555Q8NEP9 628 aa11.5□□□□□ -0.57
COMMD4-216ENST00000567023 PELI1Q96FA3 418 aa11.5□□□□□ -0.57
COMMD4-216ENST00000567023 Q96MT0 163 aa11.5□□□□□ -0.57
COMMD4-216ENST00000567023 OPALINQ96PE5 141 aa11.5□□□□□ -0.57
COMMD4-216ENST00000567023 MYCBPQ99417 103 aaPredicted RBP11.5□□□□□ -0.57
COMMD4-216ENST00000567023 RHOFQ9HBH0 211 aa11.5□□□□□ -0.57
COMMD4-216ENST00000567023 HMG20AQ9NP66 347 aa11.5□□□□□ -0.57
COMMD4-216ENST00000567023 GLS2Q9UI32 602 aa11.5□□□□□ -0.57
COMMD4-216ENST00000567023 PITPNC1Q9UKF7 332 aa11.5□□□□□ -0.57
COMMD4-216ENST00000567023 HHLA2Q9UM44 414 aa11.5□□□□□ -0.57
COMMD4-216ENST00000567023 UBE2J1Q9Y385 318 aaPredicted RBP11.5□□□□□ -0.57
COMMD4-216ENST00000567023 MINOS1-NBL1R4GNA1 71 aa11.5□□□□□ -0.57
COMMD4-216ENST00000567023 TET2Q6N021 2002 aaPredicted RBP11.5□□□□□ -0.57
COMMD4-216ENST00000567023 MEX3AA1L020 520 aaKnown RBP11.49□□□□□ -0.57
COMMD4-216ENST00000567023 A6NDX4 124 aa11.49□□□□□ -0.57
COMMD4-216ENST00000567023 WBP4O75554 376 aaKnown RBP11.49□□□□□ -0.57
COMMD4-216ENST00000567023 ALX3O95076 343 aa11.49□□□□□ -0.57
COMMD4-216ENST00000567023 RPSAP08865 295 aaKnown RBP11.49□□□□□ -0.57
COMMD4-216ENST00000567023 HTR1AP08908 422 aa11.49□□□□□ -0.57
COMMD4-216ENST00000567023 ZNF20P17024 532 aa11.49□□□□□ -0.57
COMMD4-216ENST00000567023 GABRR1P24046 479 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms