RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, human

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD4-215	ENST00000566843	GNMT	Q14749	295 aa		13.65	□□□□□ -0.22
COMMD4-215	ENST00000566843	ICAM4	Q14773	271 aa		13.65	□□□□□ -0.22
COMMD4-215	ENST00000566843	CARD17	Q5XLA6	110 aa		13.65	□□□□□ -0.22
COMMD4-215	ENST00000566843	REC114	Q7Z4M0	266 aa		13.65	□□□□□ -0.22
COMMD4-215	ENST00000566843	ZNF429	Q86V71	674 aa		13.65	□□□□□ -0.22
COMMD4-215	ENST00000566843	OR1L3	Q8NH93	324 aa		13.65	□□□□□ -0.22
COMMD4-215	ENST00000566843	TVP23C	Q96ET8	276 aa		13.65	□□□□□ -0.22
COMMD4-215	ENST00000566843	ZDHHC12	Q96GR4	267 aa		13.65	□□□□□ -0.22
COMMD4-215	ENST00000566843	REEP6	Q96HR9	211 aa		13.65	□□□□□ -0.22
COMMD4-215	ENST00000566843	OXGR1	Q96P68	337 aa		13.65	□□□□□ -0.22
COMMD4-215	ENST00000566843	FAAP24	Q9BTP7	215 aa		13.65	□□□□□ -0.22
COMMD4-215	ENST00000566843	ABHD14A	Q9BUJ0	271 aa		13.65	□□□□□ -0.22
COMMD4-215	ENST00000566843	HIPK2	Q9H2X6	1198 aa		13.65	□□□□□ -0.22
COMMD4-215	ENST00000566843	ELL3	Q9HB65	397 aa	Predicted RBP	13.65	□□□□□ -0.22
COMMD4-215	ENST00000566843	SLC2A9	Q9NRM0	540 aa		13.65	□□□□□ -0.22
COMMD4-215	ENST00000566843	NXT1	Q9UKK6	140 aa	Known RBP	13.65	□□□□□ -0.22
COMMD4-215	ENST00000566843	SLCO1B1	Q9Y6L6	691 aa		13.65	□□□□□ -0.22
COMMD4-215	ENST00000566843	CCDC187	A0A096LP49	1063 aa		13.64	□□□□□ -0.23
COMMD4-215	ENST00000566843	ZNF587B	E7ETH6	402 aa		13.64	□□□□□ -0.23
COMMD4-215	ENST00000566843	SCAF4	O95104	1147 aa	Known RBP	13.64	□□□□□ -0.23
COMMD4-215	ENST00000566843	PPM1F	P49593	454 aa	Predicted RBP	13.64	□□□□□ -0.23
COMMD4-215	ENST00000566843	PLPPR5	Q32ZL2	321 aa		13.64	□□□□□ -0.23
COMMD4-215	ENST00000566843	TSPO2	Q5TGU0	170 aa		13.64	□□□□□ -0.23
COMMD4-215	ENST00000566843	OR2C3	Q8N628	320 aa		13.64	□□□□□ -0.23
COMMD4-215	ENST00000566843	PIGT	Q969N2	578 aa		13.64	□□□□□ -0.23
COMMD4-215	ENST00000566843	ZNF160	Q9HCG1	818 aa		13.64	□□□□□ -0.23
COMMD4-215	ENST00000566843		H0YL77	283 aa		13.64	□□□□□ -0.23
COMMD4-215	ENST00000566843	IFNA10	P01566	189 aa		13.64	□□□□□ -0.23
COMMD4-215	ENST00000566843	IGLV3-19	P01714	112 aa		13.64	□□□□□ -0.23
COMMD4-215	ENST00000566843	SOD3	P08294	240 aa		13.64	□□□□□ -0.23
COMMD4-215	ENST00000566843	SELL	P14151	372 aa		13.64	□□□□□ -0.23
COMMD4-215	ENST00000566843	MSX1	P28360	303 aa		13.64	□□□□□ -0.23
COMMD4-215	ENST00000566843	RRAD	P55042	308 aa		13.64	□□□□□ -0.23
COMMD4-215	ENST00000566843	SLC35E3	Q7Z769	313 aa		13.64	□□□□□ -0.23
COMMD4-215	ENST00000566843	OR14L1P	Q8NHC6	308 aa		13.64	□□□□□ -0.23
COMMD4-215	ENST00000566843	PIGL	Q9Y2B2	252 aa		13.64	□□□□□ -0.23
COMMD4-215	ENST00000566843	IGSF23	A1L1A6	192 aa		13.63	□□□□□ -0.23
COMMD4-215	ENST00000566843	ZNF814	B7Z6K7	855 aa		13.63	□□□□□ -0.23
COMMD4-215	ENST00000566843	KLK2	P20151	261 aa		13.63	□□□□□ -0.23
COMMD4-215	ENST00000566843	PHLDA2	Q53GA4	152 aa		13.63	□□□□□ -0.23
COMMD4-215	ENST00000566843	MOB3A	Q96BX8	217 aa		13.63	□□□□□ -0.23
COMMD4-215	ENST00000566843	RFNG	Q9Y644	331 aa		13.63	□□□□□ -0.23
COMMD4-215	ENST00000566843	IGLV3-32	A0A0A0MS00	114 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	TGIF2-C20orf24	A0A0A6YYL0	155 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	LOC102725191	A0A1B0GVB3	256 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	FAM24A	A6NFZ4	105 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	SHISA7	A6NL88	538 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	CDRT15L2	A8MXV6	281 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	ZNF732	B4DXR9	585 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	PPP1R2P9	O14990	202 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	SEC16A	O15027	2179 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	CDS2	O95674	445 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	PTBP3	O95758	552 aa	Known RBP	13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	DBH	P09172	617 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	ZNF41	P51814	821 aa	Predicted RBP	13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	RSPO1	Q2MKA7	263 aa	Predicted RBP	13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	KHDC3L	Q587J8	217 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	ZFP62	Q8NB50	900 aa	Predicted RBP	13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	OR5L1	Q8NGL2	311 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	CPNE4	Q96A23	557 aa	Predicted RBP	13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	JSRP1	Q96MG2	331 aa	Predicted RBP	13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	METTL9	Q9H1A3	318 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	FAM230A	A0A1W2PPH8	454 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	PAX1	P15863	534 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	OTX1	P32242	354 aa	Predicted RBP	13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	OPRM1	P35372	400 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	ASCL1	P50553	236 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	FXYD4	P59646	89 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	PKIA	P61925	76 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	HIST1H3A	P68431	136 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	HIST2H3PS2	Q5TEC6	136 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	CCDC71L	Q8N9Z2	235 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	OR10G4	Q8NGN3	311 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	RHOV	Q96L33	236 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	GPR61	Q9BZJ8	451 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	PLEKHF2	Q9H8W4	249 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	MMP17	Q9ULZ9	603 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	LIPG	Q9Y5X9	500 aa		13.62	□□□□□ -0.23
COMMD4-215	ENST00000566843	IGHV3-20	A0A0C4DH32	117 aa		13.61	□□□□□ -0.23
COMMD4-215	ENST00000566843		A0A1W2PPC4	97 aa		13.61	□□□□□ -0.23
COMMD4-215	ENST00000566843		B4DEV8	164 aa		13.61	□□□□□ -0.23
COMMD4-215	ENST00000566843	TERT	O14746	1132 aa	Known RBP	13.61	□□□□□ -0.23
COMMD4-215	ENST00000566843	TGOLN2	O43493	480 aa		13.61	□□□□□ -0.23
COMMD4-215	ENST00000566843	NKX6-1	P78426	367 aa	Predicted RBP	13.61	□□□□□ -0.23
COMMD4-215	ENST00000566843	GFI1B	Q5VTD9	330 aa		13.61	□□□□□ -0.23
COMMD4-215	ENST00000566843	ASCL4	Q6XD76	172 aa		13.61	□□□□□ -0.23
COMMD4-215	ENST00000566843	SLC35G3	Q8N808	338 aa		13.61	□□□□□ -0.23
COMMD4-215	ENST00000566843	CYB561D1	Q8N8Q1	229 aa		13.61	□□□□□ -0.23
COMMD4-215	ENST00000566843	NFAM1	Q8NET5	270 aa	Predicted RBP	13.61	□□□□□ -0.23
COMMD4-215	ENST00000566843	M1AP	Q8TC57	530 aa		13.61	□□□□□ -0.23
COMMD4-215	ENST00000566843	ABHD14B	Q96IU4	210 aa		13.61	□□□□□ -0.23
COMMD4-215	ENST00000566843	WSB1	Q9Y6I7	421 aa		13.61	□□□□□ -0.23
COMMD4-215	ENST00000566843	MYO7B	Q6PIF6	2116 aa		13.61	□□□□□ -0.23
COMMD4-215	ENST00000566843	OR5H15	A6NDH6	313 aa		13.61	□□□□□ -0.23
COMMD4-215	ENST00000566843	OR5H1	A6NKK0	313 aa		13.61	□□□□□ -0.23
COMMD4-215	ENST00000566843	ZNF726	A6NNF4	738 aa		13.61	□□□□□ -0.23
COMMD4-215	ENST00000566843	TRDC	B7Z8K6	153 aa		13.61	□□□□□ -0.23
COMMD4-215	ENST00000566843	PHF1	O43189	567 aa	Predicted RBP	13.61	□□□□□ -0.23
COMMD4-215	ENST00000566843	HSPA12A	O43301	675 aa		13.61	□□□□□ -0.23
COMMD4-215	ENST00000566843	ZNF205	O95201	554 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms