RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 ZNF256Q9Y2P7 627 aaPredicted RBP7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 TBL2Q9Y4P3 447 aaKnown RBP7.21□□□□□ -1.26
VPS9D1-205ENST00000565452 DAPL1A0PJW8 107 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 M0R129 80 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 XRCC2O43543 280 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 SLC25A17O43808 307 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 LY86O95711 162 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 KRT8P05787 483 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 LPLP06858 475 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 ACAA1P09110 424 aaPredicted RBP7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 GNAO1P09471 354 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 AMY2BP19961 511 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 COX7A1P24310 79 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 RPS27P42677 84 aaKnown RBP7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 RAB25P57735 213 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 ACTA2P62736 377 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 RPL23AP62750 156 aaKnown RBP7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 ACTG2P63267 376 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 ZNF91Q05481 1191 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 GALEQ14376 348 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 ZNF829Q3KNS6 432 aaPredicted RBP7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 C6orf141Q5SZD1 244 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 STUMQ69YW2 141 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 ZNF788Q6ZQV5 615 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 C16orf82Q7Z2V1 217 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 DYNAPQ8N1N2 210 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 IL17DQ8TAD2 202 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 APH1BQ8WW43 257 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 LGALS12Q96DT0 336 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 SEH1LQ96EE3 360 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 OR8B4Q96RC9 309 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 P2RX4Q99571 388 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 RGCCQ9H4X1 137 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 EDA2RQ9HAV5 297 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 CHCHD3Q9NX63 227 aaKnown RBP7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 TPRKBQ9Y3C4 175 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 LRP12Q9Y561 859 aa7.2□□□□□ -1.26
VPS9D1-205ENST00000565452 A0A0U1RQV5 110 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 TMEM269A0A1B0GVZ9 245 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 A0A1W2PQL4 384 aaPredicted RBP7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 PSMB11A5LHX3 300 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 METTL15A6NJ78 407 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 ANKRD30BLA7E2S9 258 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 SIGLEC5O15389 551 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 IGHA1P01876 353 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 ARG1P05089 322 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 MRPL3P09001 348 aaKnown RBP7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 SELLP14151 372 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 ATP6V1B1P15313 513 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 DDOSTP39656 456 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 LUMP51884 338 aaPredicted RBP7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 HCCSP53701 268 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 ERVFRD-1P60508 538 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 DGUOKQ16854 277 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 RBM48Q5RL73 367 aaKnown RBP7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 ZNF684Q5T5D7 378 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 RNLSQ5VYX0 342 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 OTPQ5XKR4 325 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 C10orf99Q6UWK7 81 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 WDR82Q6UXN9 313 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 TMPRSS11AQ6ZMR5 421 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 C8orf86Q6ZUL3 223 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 OVCH2Q7RTZ1 564 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 OR2W3Q7Z3T1 314 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 NAA40Q86UY6 237 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 SYS1Q8N2H4 156 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 OSR2Q8N2R0 312 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 CCDC54Q8NEL0 328 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 OR1M1Q8NGA1 313 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 OR10H4Q8NGA5 316 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 OR52I1Q8NGK6 324 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 OR5M8Q8NGP6 311 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 CNIH3Q8TBE1 160 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 GGHQ92820 318 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 TMEM80Q96HE8 168 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 GAFA1Q96PS6 74 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 MOB1AQ9H8S9 216 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 AMBNQ9NP70 447 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 SNTG1Q9NSN8 517 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 PSORS1C1Q9UIG5 152 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 SCOCQ9UIL1 159 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 IKZF2Q9UKS7 526 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 BLOC1S6Q9UL45 172 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 DIMT1Q9UNQ2 313 aaKnown RBP7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 EXOSC1Q9Y3B2 195 aaKnown RBP7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 LRRC42Q9Y546 428 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 SNX5Q9Y5X3 404 aa7.19□□□□□ -1.26
VPS9D1-205ENST00000565452 FAM90A22PA8MWA6 464 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 SEC14L6B5MCN3 397 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 CCL24O00175 119 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 CDIPTO14735 213 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 MRPS14O60783 128 aaKnown RBP7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 PSKH1P11801 424 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 MYL12AP19105 171 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 GABRA2P47869 451 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 CX3CR1P49238 355 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 PRKXP51817 358 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 PSMA6P60900 246 aaKnown RBP7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 GMFBP60983 142 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms