RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 RBM24Q9BX46 236 aaKnown RBP17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 NAA60Q9H7X0 242 aa17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 FBLN5Q9UBX5 448 aa17.87■□□□□ 0.45
MAP1LC3B-206ENST00000564844 PATE4P0C8F1 98 aa17.86■□□□□ 0.45
MAP1LC3B-206ENST00000564844 USF2Q15853 346 aaPredicted RBP17.86■□□□□ 0.45
MAP1LC3B-206ENST00000564844 THEM4Q5T1C6 240 aa17.86■□□□□ 0.45
MAP1LC3B-206ENST00000564844 CA5BP1Q8WTZ4 195 aa17.86■□□□□ 0.45
MAP1LC3B-206ENST00000564844 SNX22Q96L94 193 aa17.86■□□□□ 0.45
MAP1LC3B-206ENST00000564844 AHCTF1Q8WYP5 2266 aa17.86■□□□□ 0.45
MAP1LC3B-206ENST00000564844 G3V3Y1 287 aa17.86■□□□□ 0.45
MAP1LC3B-206ENST00000564844 PGA4P0DJD7 388 aa17.86■□□□□ 0.45
MAP1LC3B-206ENST00000564844 PGA3P0DJD8 388 aa17.86■□□□□ 0.45
MAP1LC3B-206ENST00000564844 CXorf66Q5JRM2 361 aaPredicted RBP17.86■□□□□ 0.45
MAP1LC3B-206ENST00000564844 FAM89BQ8N5H3 189 aa17.86■□□□□ 0.45
MAP1LC3B-206ENST00000564844 RHBDD1Q8TEB9 315 aa17.86■□□□□ 0.45
MAP1LC3B-206ENST00000564844 TP53RKQ96S44 253 aa17.86■□□□□ 0.45
MAP1LC3B-206ENST00000564844 MRPL13Q9BYD1 178 aaKnown RBP17.86■□□□□ 0.45
MAP1LC3B-206ENST00000564844 BLACEA4D250 179 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 PHOX2AO14813 284 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 GEMIN2O14893 280 aaKnown RBP17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 F10P00742 488 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 GNMTQ14749 295 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 PPA1Q15181 289 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 CYB5R2Q6BCY4 276 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 NOXO1Q8NFA2 376 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 TMEM171Q8WVE6 324 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 SLC39A7Q92504 469 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 FRZBQ92765 325 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 PNRC2Q9NPJ4 139 aaKnown RBP17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 DOCK7Q96N67 2140 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 MMP9P14780 707 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 LBX1P52954 281 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 DCAF7P61962 342 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 ZNF124Q15973 351 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 NKAIN1Q4KMZ8 207 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 ZNF880Q6PDB4 577 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 OR5C1Q8NGR4 320 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 UFSP2Q9NUQ7 469 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 PPP4R1LQ9P1A2 415 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 HSF4Q9ULV5 492 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 HS3ST3A1Q9Y663 406 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 ZFP92A6NM28 416 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 SERPINE3A8MV23 424 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 HSPB6O14558 160 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 TRGC1P0CF51 173 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 ZNF41P51814 821 aaPredicted RBP17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 MMACHCQ9Y4U1 282 aa17.85■□□□□ 0.45
MAP1LC3B-206ENST00000564844 IGSF23A1L1A6 192 aa17.84■□□□□ 0.45
MAP1LC3B-206ENST00000564844 EPHA1P21709 976 aa17.84■□□□□ 0.45
MAP1LC3B-206ENST00000564844 C17orf67Q0P5P2 114 aa17.84■□□□□ 0.45
MAP1LC3B-206ENST00000564844 SNAI3Q3KNW1 292 aa17.84■□□□□ 0.45
MAP1LC3B-206ENST00000564844 NAT6Q93015 286 aa17.84■□□□□ 0.45
MAP1LC3B-206ENST00000564844 ZNF837Q96EG3 531 aaPredicted RBP17.84■□□□□ 0.45
MAP1LC3B-206ENST00000564844 SHISA7A6NL88 538 aa17.84■□□□□ 0.45
MAP1LC3B-206ENST00000564844 K7N7A8 449 aa17.84■□□□□ 0.45
MAP1LC3B-206ENST00000564844 ST8SIA5O15466 376 aa17.84■□□□□ 0.45
MAP1LC3B-206ENST00000564844 PGA5P0DJD9 388 aa17.84■□□□□ 0.45
MAP1LC3B-206ENST00000564844 GUCA1AP43080 201 aaPredicted RBP17.84■□□□□ 0.45
MAP1LC3B-206ENST00000564844 RAB11AP62491 216 aa17.84■□□□□ 0.45
MAP1LC3B-206ENST00000564844 OR10G3Q8NGC4 313 aa17.84■□□□□ 0.45
MAP1LC3B-206ENST00000564844 SDHAF3Q9NRP4 125 aa17.84■□□□□ 0.45
MAP1LC3B-206ENST00000564844 PLEK2Q9NYT0 353 aa17.84■□□□□ 0.45
MAP1LC3B-206ENST00000564844 WSB1Q9Y6I7 421 aa17.84■□□□□ 0.45
MAP1LC3B-206ENST00000564844 A0A087X0M5 115 aa17.83■□□□□ 0.45
MAP1LC3B-206ENST00000564844 A0A1B0GX30 115 aa17.83■□□□□ 0.45
MAP1LC3B-206ENST00000564844 HSD17B6O14756 317 aa17.83■□□□□ 0.45
MAP1LC3B-206ENST00000564844 OR2J2O76002 312 aa17.83■□□□□ 0.45
MAP1LC3B-206ENST00000564844 HLA-HP01893 362 aa17.83■□□□□ 0.45
MAP1LC3B-206ENST00000564844 PMELP40967 661 aa17.83■□□□□ 0.45
MAP1LC3B-206ENST00000564844 HYAL1Q12794 435 aa17.83■□□□□ 0.45
MAP1LC3B-206ENST00000564844 SHHQ15465 462 aa17.83■□□□□ 0.45
MAP1LC3B-206ENST00000564844 GNG13Q9P2W3 67 aa17.83■□□□□ 0.45
MAP1LC3B-206ENST00000564844 TLCD2A6NGC4 264 aa17.83■□□□□ 0.44
MAP1LC3B-206ENST00000564844 ZNF587BE7ETH6 402 aa17.83■□□□□ 0.44
MAP1LC3B-206ENST00000564844 DUSP1P28562 367 aa17.83■□□□□ 0.44
MAP1LC3B-206ENST00000564844 FGF8P55075 233 aaPredicted RBP17.83■□□□□ 0.44
MAP1LC3B-206ENST00000564844 RPL23AP62750 156 aaKnown RBP17.83■□□□□ 0.44
MAP1LC3B-206ENST00000564844 ZP4Q12836 540 aa17.83■□□□□ 0.44
MAP1LC3B-206ENST00000564844 IZUMO4Q1ZYL8 232 aa17.83■□□□□ 0.44
MAP1LC3B-206ENST00000564844 SPSB3Q6PJ21 355 aa17.83■□□□□ 0.44
MAP1LC3B-206ENST00000564844 MYPOPQ86VE0 399 aaPredicted RBP17.83■□□□□ 0.44
MAP1LC3B-206ENST00000564844 OR2C3Q8N628 320 aa17.83■□□□□ 0.44
MAP1LC3B-206ENST00000564844 NECAP1Q8NC96 275 aa17.83■□□□□ 0.44
MAP1LC3B-206ENST00000564844 ABHD5Q8WTS1 349 aa17.83■□□□□ 0.44
MAP1LC3B-206ENST00000564844 NUDT16L1Q9BRJ7 211 aaKnown RBP17.83■□□□□ 0.44
MAP1LC3B-206ENST00000564844 METTL7AQ9H8H3 244 aa17.83■□□□□ 0.44
MAP1LC3B-206ENST00000564844 ANKUB1A6NFN9 424 aa17.83■□□□□ 0.44
MAP1LC3B-206ENST00000564844 C5orf67F2Z3F1 127 aa17.83■□□□□ 0.44
MAP1LC3B-206ENST00000564844 SCAF4O95104 1147 aaKnown RBP17.83■□□□□ 0.44
MAP1LC3B-206ENST00000564844 PHYHD1Q5SRE7 291 aa17.83■□□□□ 0.44
MAP1LC3B-206ENST00000564844 HAS2Q92819 552 aa17.83■□□□□ 0.44
MAP1LC3B-206ENST00000564844 MALSU1Q96EH3 234 aa17.83■□□□□ 0.44
MAP1LC3B-206ENST00000564844 EML6Q6ZMW3 1958 aa17.82■□□□□ 0.44
MAP1LC3B-206ENST00000564844 TRAF3IP2O43734 574 aaPredicted RBP17.82■□□□□ 0.44
MAP1LC3B-206ENST00000564844 SNRPCP09234 159 aaKnown RBP17.82■□□□□ 0.44
MAP1LC3B-206ENST00000564844 RAB1AP62820 205 aa17.82■□□□□ 0.44
MAP1LC3B-206ENST00000564844 MPV17LQ2QL34 196 aa17.82■□□□□ 0.44
MAP1LC3B-206ENST00000564844 LIAT1Q6ZQX7 453 aa17.82■□□□□ 0.44
MAP1LC3B-206ENST00000564844 SSX3Q99909 188 aa17.82■□□□□ 0.44
MAP1LC3B-206ENST00000564844 P4HTMQ9NXG6 502 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms