RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 IFT22Q9H7X7 185 aa10.8□□□□□ -0.68
CLK3-214ENST00000564096 MRPS7Q9Y2R9 242 aaKnown RBP10.8□□□□□ -0.68
CLK3-214ENST00000564096 LRRK2Q5S007 2527 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 TRAV18A0A075B6X5 111 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 TRAV38-1A0A0B4J264 116 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 A0A0G2JMP0 313 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 A0A0X1KG70 313 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 OOEPA6NGQ2 149 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 RAB27BO00194 218 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 SH2D1BO14796 132 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 HAND1O96004 215 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 CYB5R3P00387 301 aaPredicted RBP10.79□□□□□ -0.68
CLK3-214ENST00000564096 GSTP1P09211 210 aaKnown RBP10.79□□□□□ -0.68
CLK3-214ENST00000564096 MUC1P15941 1255 aaPredicted RBP10.79□□□□□ -0.68
CLK3-214ENST00000564096 EGR1P18146 543 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 CDKN1AP38936 164 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 EFNA4P52798 201 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 GNG2P59768 71 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 ZNF146Q15072 292 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 ATAD3CQ5T2N8 411 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 Q6ZTK2 550 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 SNX29P2Q8IUI4 249 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 IZUMO1Q8IYV9 350 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 GDPD1Q8N9F7 314 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 OR4M2Q8NGB6 313 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 PPP1R35Q8TAP8 253 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 TIMD4Q96H15 378 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 SCPEP1Q9HB40 452 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 BARX1Q9HBU1 254 aaPredicted RBP10.79□□□□□ -0.68
CLK3-214ENST00000564096 PLEKHJ1Q9NW61 149 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 OR14J1Q9UGF5 321 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 HSF4Q9ULV5 492 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 WIPI2Q9Y4P8 454 aa10.79□□□□□ -0.68
CLK3-214ENST00000564096 HELZ2Q9BYK8 2649 aaKnown RBP10.79□□□□□ -0.68
CLK3-214ENST00000564096 FLNCQ14315 2725 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 PPIAL4EA0A075B759 164 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 A0A0A6YYD4 124 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 PPIAL4DF5H284 164 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 F8VVB4 439 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 F8VWA3 439 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 TMEM178BH3BS89 294 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 LGALS8O00214 317 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 WNT9BO14905 357 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 DEGS1O15121 323 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 CTDSPLO15194 276 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 LHBP01229 141 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 GLAP06280 429 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 INHBBP09529 407 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 PPIAL4FP0DN26 164 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 DAOP14920 347 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 FUT3P21217 361 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 CD80P33681 288 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 PMELP40967 661 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 INPP1P49441 399 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 PPP5CP53041 499 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 RBM39Q14498 530 aaKnown RBP10.78□□□□□ -0.68
CLK3-214ENST00000564096 PNLIPRP3Q17RR3 467 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 MOGAT2Q3SYC2 334 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 SPRNQ5BIV9 151 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 TEX36Q5VZQ5 186 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 TRIQKQ629K1 86 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 ZNF787Q6DD87 383 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 ZNF295-AS1Q8N0V1 137 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 MUC20Q8N307 709 aaPredicted RBP10.78□□□□□ -0.68
CLK3-214ENST00000564096 NEK7Q8TDX7 302 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 BORCS5Q969J3 196 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 SRRQ9GZT4 340 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 WDR13Q9H1Z4 485 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 AUNIPQ9H7T9 357 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 RCC2Q9P258 522 aaKnown RBP10.78□□□□□ -0.68
CLK3-214ENST00000564096 IL36RNQ9UBH0 155 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 PPIAL4AQ9Y536 164 aa10.78□□□□□ -0.68
CLK3-214ENST00000564096 TMEM235A6NFC5 223 aa10.77□□□□□ -0.69
CLK3-214ENST00000564096 OR2AT4A6NND4 320 aa10.77□□□□□ -0.69
CLK3-214ENST00000564096 FOXI3A8MTJ6 420 aaPredicted RBP10.77□□□□□ -0.69
CLK3-214ENST00000564096 MCRIP1C9JLW8 97 aa10.77□□□□□ -0.69
CLK3-214ENST00000564096 C3orf80F5H4A9 247 aa10.77□□□□□ -0.69
CLK3-214ENST00000564096 OVOL3O00110 214 aa10.77□□□□□ -0.69
CLK3-214ENST00000564096 SULT1C2O00338 296 aa10.77□□□□□ -0.69
CLK3-214ENST00000564096 MFNGO00587 321 aa10.77□□□□□ -0.69
CLK3-214ENST00000564096 SOCS1O15524 211 aa10.77□□□□□ -0.69
CLK3-214ENST00000564096 CA11O75493 328 aa10.77□□□□□ -0.69
CLK3-214ENST00000564096 OR2H2O95918 312 aa10.77□□□□□ -0.69
CLK3-214ENST00000564096 F12P00748 615 aaPredicted RBP10.77□□□□□ -0.69
CLK3-214ENST00000564096 LPLP06858 475 aa10.77□□□□□ -0.69
CLK3-214ENST00000564096 CSF3P09919 207 aa10.77□□□□□ -0.69
CLK3-214ENST00000564096 COL8A1P27658 744 aa10.77□□□□□ -0.69
CLK3-214ENST00000564096 CHATP28329 748 aa10.77□□□□□ -0.69
CLK3-214ENST00000564096 PRSS3P35030 304 aa10.77□□□□□ -0.69
CLK3-214ENST00000564096 MDH2P40926 338 aaKnown RBP10.77□□□□□ -0.69
CLK3-214ENST00000564096 KCNJ3P48549 501 aa10.77□□□□□ -0.69
CLK3-214ENST00000564096 PTH2RP49190 550 aa10.77□□□□□ -0.69
CLK3-214ENST00000564096 ACTBP60709 375 aa10.77□□□□□ -0.69
CLK3-214ENST00000564096 BTG1P62324 171 aa10.77□□□□□ -0.69
CLK3-214ENST00000564096 ACTG1P63261 375 aa10.77□□□□□ -0.69
CLK3-214ENST00000564096 MADCAM1Q13477 382 aa10.77□□□□□ -0.69
CLK3-214ENST00000564096 ARFRP1Q13795 201 aa10.77□□□□□ -0.69
CLK3-214ENST00000564096 ZNF79Q15937 498 aa10.77□□□□□ -0.69
CLK3-214ENST00000564096 PAN3Q58A45 887 aaKnown RBP10.77□□□□□ -0.69
CLK3-214ENST00000564096 Q8N402 240 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms