RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 RAB9AP51151 201 aa7.8□□□□□ -1.16
HDGFL3-204ENST00000563790 MECP2P51608 486 aaKnown RBP7.8□□□□□ -1.16
HDGFL3-204ENST00000563790 KRR1Q13601 381 aaKnown RBP7.8□□□□□ -1.16
HDGFL3-204ENST00000563790 GALEQ14376 348 aa7.8□□□□□ -1.16
HDGFL3-204ENST00000563790 ZBED5Q49AG3 693 aa7.8□□□□□ -1.16
HDGFL3-204ENST00000563790 SLC18B1Q6NT16 456 aa7.8□□□□□ -1.16
HDGFL3-204ENST00000563790 ZNF767PQ75MW2 155 aa7.8□□□□□ -1.16
HDGFL3-204ENST00000563790 VTCN1Q7Z7D3 282 aa7.8□□□□□ -1.16
HDGFL3-204ENST00000563790 OR8J3Q8NGG0 315 aa7.8□□□□□ -1.16
HDGFL3-204ENST00000563790 RCN3Q96D15 328 aa7.8□□□□□ -1.16
HDGFL3-204ENST00000563790 ZNF570Q96NI8 536 aa7.8□□□□□ -1.16
HDGFL3-204ENST00000563790 YY1AP1Q9H869 796 aa7.8□□□□□ -1.16
HDGFL3-204ENST00000563790 LIN7CQ9NUP9 197 aaKnown RBP7.8□□□□□ -1.16
HDGFL3-204ENST00000563790 NKIRAS1Q9NYS0 192 aa7.8□□□□□ -1.16
HDGFL3-204ENST00000563790 GRHPRQ9UBQ7 328 aa7.8□□□□□ -1.16
HDGFL3-204ENST00000563790 UBE2CO00762 179 aa7.79□□□□□ -1.16
HDGFL3-204ENST00000563790 CDIPTO14735 213 aa7.79□□□□□ -1.16
HDGFL3-204ENST00000563790 PSG2P11465 335 aa7.79□□□□□ -1.16
HDGFL3-204ENST00000563790 TMEM11P17152 192 aa7.79□□□□□ -1.16
HDGFL3-204ENST00000563790 KDELR2P33947 212 aa7.79□□□□□ -1.16
HDGFL3-204ENST00000563790 YAP1P46937 504 aaKnown RBP7.79□□□□□ -1.16
HDGFL3-204ENST00000563790 SELENOWP63302 87 aa7.79□□□□□ -1.16
HDGFL3-204ENST00000563790 ZNF92Q03936 586 aa7.79□□□□□ -1.16
HDGFL3-204ENST00000563790 RAB40BQ12829 278 aa7.79□□□□□ -1.16
HDGFL3-204ENST00000563790 SNAI3Q3KNW1 292 aa7.79□□□□□ -1.16
HDGFL3-204ENST00000563790 MBOAT2Q6ZWT7 520 aa7.79□□□□□ -1.16
HDGFL3-204ENST00000563790 CROCCP2Q86T23 111 aa7.79□□□□□ -1.16
HDGFL3-204ENST00000563790 TGIF2LXQ8IUE1 241 aa7.79□□□□□ -1.16
HDGFL3-204ENST00000563790 RNF113BQ8IZP6 322 aaKnown RBP7.79□□□□□ -1.16
HDGFL3-204ENST00000563790 OR6V1Q8N148 313 aa7.79□□□□□ -1.16
HDGFL3-204ENST00000563790 GJC3Q8NFK1 279 aa7.79□□□□□ -1.16
HDGFL3-204ENST00000563790 OR9G4Q8NGQ1 327 aa7.79□□□□□ -1.16
HDGFL3-204ENST00000563790 FUZQ9BT04 418 aa7.79□□□□□ -1.16
HDGFL3-204ENST00000563790 TMEM133Q9H2Q1 129 aa7.79□□□□□ -1.16
HDGFL3-204ENST00000563790 CYB5R1Q9UHQ9 305 aa7.79□□□□□ -1.16
HDGFL3-204ENST00000563790 RPS6KA6Q9UK32 745 aa7.79□□□□□ -1.16
HDGFL3-204ENST00000563790 OOSP1A8MZH6 123 aa7.78□□□□□ -1.16
HDGFL3-204ENST00000563790 XKRYO14609 159 aa7.78□□□□□ -1.16
HDGFL3-204ENST00000563790 ANGPT2O15123 496 aa7.78□□□□□ -1.16
HDGFL3-204ENST00000563790 CD34P28906 385 aa7.78□□□□□ -1.16
HDGFL3-204ENST00000563790 OMPP47874 163 aa7.78□□□□□ -1.16
HDGFL3-204ENST00000563790 APOC4P55056 127 aa7.78□□□□□ -1.16
HDGFL3-204ENST00000563790 MALLQ13021 153 aa7.78□□□□□ -1.16
HDGFL3-204ENST00000563790 ICAM4Q14773 271 aa7.78□□□□□ -1.16
HDGFL3-204ENST00000563790 TRAM2Q15035 370 aa7.78□□□□□ -1.16
HDGFL3-204ENST00000563790 MRPL21Q7Z2W9 205 aaKnown RBP7.78□□□□□ -1.16
HDGFL3-204ENST00000563790 ADCK1Q86TW2 530 aa7.78□□□□□ -1.16
HDGFL3-204ENST00000563790 LINC00346Q8IVM7 164 aa7.78□□□□□ -1.16
HDGFL3-204ENST00000563790 UBE2DNLQ8IWF7 75 aa7.78□□□□□ -1.16
HDGFL3-204ENST00000563790 ZNF561Q8N587 486 aa7.78□□□□□ -1.16
HDGFL3-204ENST00000563790 OR2AE1Q8NHA4 323 aa7.78□□□□□ -1.16
HDGFL3-204ENST00000563790 MNTQ99583 582 aa7.78□□□□□ -1.16
HDGFL3-204ENST00000563790 MRPL22Q9NWU5 206 aaKnown RBP7.78□□□□□ -1.16
HDGFL3-204ENST00000563790 SESN1Q9Y6P5 492 aa7.78□□□□□ -1.16
HDGFL3-204ENST00000563790 TRAV10A0A0B4J240 114 aa7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 OR6C68A6NDL8 312 aa7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 FAM220BPB1ANY3 271 aa7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 PSMD9O00233 223 aa7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 SOCS2O14508 198 aa7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 NDUFB2O95178 105 aa7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 IFNA21P01568 189 aa7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 IFNA17P01571 189 aa7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 IGLV1-47P01700 117 aa7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 VIMP08670 466 aaKnown RBP7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 PIPP12273 146 aaPredicted RBP7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 CEACAM3P40198 252 aa7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 APOFQ13790 326 aa7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 GFOD2Q3B7J2 385 aa7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 LRRC23Q53EV4 343 aaPredicted RBP7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 TPTE2P1Q5T6R2 138 aa7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 ERICH5Q6P6B1 374 aa7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 LINC00596Q86U02 117 aa7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 ABHD12Q8N2K0 398 aa7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 ZNF676Q8N7Q3 588 aa7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 OR8S1Q8NH09 359 aa7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 C1orf21Q9H246 121 aa7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 MRM2Q9UI43 246 aaKnown RBP7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 B9D1Q9UPM9 204 aa7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 IER3IP1Q9Y5U9 82 aa7.77□□□□□ -1.17
HDGFL3-204ENST00000563790 A0A0U1RQV1 116 aa7.76□□□□□ -1.17
HDGFL3-204ENST00000563790 FAM90A10PA6NDY2 464 aa7.76□□□□□ -1.17
HDGFL3-204ENST00000563790 F5H5K5 113 aa7.76□□□□□ -1.17
HDGFL3-204ENST00000563790 LY6LH3BQJ8 138 aa7.76□□□□□ -1.17
HDGFL3-204ENST00000563790 AKR7A2O43488 359 aa7.76□□□□□ -1.17
HDGFL3-204ENST00000563790 CSN3P07498 182 aa7.76□□□□□ -1.17
HDGFL3-204ENST00000563790 HNF4GQ14541 408 aa7.76□□□□□ -1.17
HDGFL3-204ENST00000563790 COQ5Q5HYK3 327 aa7.76□□□□□ -1.17
HDGFL3-204ENST00000563790 GLYATL3Q5SZD4 288 aa7.76□□□□□ -1.17
HDGFL3-204ENST00000563790 PGM2L1Q6PCE3 622 aa7.76□□□□□ -1.17
HDGFL3-204ENST00000563790 ZNF730Q6ZMV8 503 aa7.76□□□□□ -1.17
HDGFL3-204ENST00000563790 THAP5Q7Z6K1 395 aa7.76□□□□□ -1.17
HDGFL3-204ENST00000563790 OR56B4Q8NH76 319 aa7.76□□□□□ -1.17
HDGFL3-204ENST00000563790 ZNF596Q8TC21 504 aa7.76□□□□□ -1.17
HDGFL3-204ENST00000563790 ZNRF4Q8WWF5 429 aa7.76□□□□□ -1.17
HDGFL3-204ENST00000563790 SPSB4Q96A44 273 aa7.76□□□□□ -1.17
HDGFL3-204ENST00000563790 CREB3L1Q96BA8 519 aa7.76□□□□□ -1.17
HDGFL3-204ENST00000563790 TPD52L3Q96J77 140 aa7.76□□□□□ -1.17
HDGFL3-204ENST00000563790 HSH2DQ96JZ2 352 aa7.76□□□□□ -1.17
HDGFL3-204ENST00000563790 FNDC11Q9BVV2 318 aa7.76□□□□□ -1.17
HDGFL3-204ENST00000563790 FGF23Q9GZV9 251 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms