RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 CACNG2Q9Y698 323 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 PDCD6O75340 191 aa18.57■□□□□ 0.56
LINC01960-201ENST00000563759 PTBP3O95758 552 aaKnown RBP18.57■□□□□ 0.56
LINC01960-201ENST00000563759 LOXP28300 417 aaPredicted RBP18.57■□□□□ 0.56
LINC01960-201ENST00000563759 CHATP28329 748 aa18.57■□□□□ 0.56
LINC01960-201ENST00000563759 ERVK11-1P61568 191 aa18.57■□□□□ 0.56
LINC01960-201ENST00000563759 SSBP1Q04837 148 aaKnown RBP18.57■□□□□ 0.56
LINC01960-201ENST00000563759 KLF9Q13886 244 aaPredicted RBP18.57■□□□□ 0.56
LINC01960-201ENST00000563759 MPV17LQ2QL34 196 aa18.57■□□□□ 0.56
LINC01960-201ENST00000563759 ATAD3CQ5T2N8 411 aa18.57■□□□□ 0.56
LINC01960-201ENST00000563759 LINC00596Q86U02 117 aa18.57■□□□□ 0.56
LINC01960-201ENST00000563759 DIRC2Q96SL1 478 aa18.57■□□□□ 0.56
LINC01960-201ENST00000563759 FN3KRPQ9HA64 309 aa18.57■□□□□ 0.56
LINC01960-201ENST00000563759 TAS2R8Q9NYW2 309 aa18.57■□□□□ 0.56
LINC01960-201ENST00000563759 HSF4Q9ULV5 492 aa18.57■□□□□ 0.56
LINC01960-201ENST00000563759 CENPXA8MT69 81 aa18.56■□□□□ 0.56
LINC01960-201ENST00000563759 C17orf100A8MU93 164 aa18.56■□□□□ 0.56
LINC01960-201ENST00000563759 C3orf80F5H4A9 247 aa18.56■□□□□ 0.56
LINC01960-201ENST00000563759 FCER2P06734 321 aa18.56■□□□□ 0.56
LINC01960-201ENST00000563759 CSF1P09603 554 aa18.56■□□□□ 0.56
LINC01960-201ENST00000563759 FIP1L1Q6UN15 594 aaKnown RBP18.56■□□□□ 0.56
LINC01960-201ENST00000563759 DCDC5Q6ZRR9 648 aa18.56■□□□□ 0.56
LINC01960-201ENST00000563759 LILRB1Q8NHL6 650 aaPredicted RBP18.56■□□□□ 0.56
LINC01960-201ENST00000563759 FAM222BQ8WU58 562 aa18.56■□□□□ 0.56
LINC01960-201ENST00000563759 ST8SIA4Q92187 359 aa18.56■□□□□ 0.56
LINC01960-201ENST00000563759 DHRS9Q9BPW9 319 aa18.56■□□□□ 0.56
LINC01960-201ENST00000563759 IFT46Q9NQC8 304 aa18.56■□□□□ 0.56
LINC01960-201ENST00000563759 ANKRD20A5PA0PJZ0 165 aa18.56■□□□□ 0.56
LINC01960-201ENST00000563759 PRSS44E7EML9 344 aa18.56■□□□□ 0.56
LINC01960-201ENST00000563759 SSX4O60224 188 aa18.56■□□□□ 0.56
LINC01960-201ENST00000563759 ACAA1P09110 424 aaPredicted RBP18.56■□□□□ 0.56
LINC01960-201ENST00000563759 DUSP1P28562 367 aa18.56■□□□□ 0.56
LINC01960-201ENST00000563759 EFNB3Q15768 340 aa18.56■□□□□ 0.56
LINC01960-201ENST00000563759 MOGAT3Q86VF5 341 aa18.56■□□□□ 0.56
LINC01960-201ENST00000563759 LRRC29Q8WV35 223 aa18.56■□□□□ 0.56
LINC01960-201ENST00000563759 CYYR1Q96J86 154 aa18.56■□□□□ 0.56
LINC01960-201ENST00000563759 HRNRQ86YZ3 2850 aaPredicted RBP18.55■□□□□ 0.56
LINC01960-201ENST00000563759 UBR5O95071 2799 aaPredicted RBP18.55■□□□□ 0.56
LINC01960-201ENST00000563759 B9A039 149 aa18.55■□□□□ 0.56
LINC01960-201ENST00000563759 TPD52L2O43399 206 aaKnown RBP18.55■□□□□ 0.56
LINC01960-201ENST00000563759 NOS1APO75052 506 aaPredicted RBP18.55■□□□□ 0.56
LINC01960-201ENST00000563759 FUT3P21217 361 aa18.55■□□□□ 0.56
LINC01960-201ENST00000563759 IL13RA2Q14627 380 aa18.55■□□□□ 0.56
LINC01960-201ENST00000563759 DAZAP2Q15038 168 aaPredicted RBP18.55■□□□□ 0.56
LINC01960-201ENST00000563759 SPRNQ5BIV9 151 aa18.55■□□□□ 0.56
LINC01960-201ENST00000563759 NRARPQ7Z6K4 114 aa18.55■□□□□ 0.56
LINC01960-201ENST00000563759 ENKURQ8TC29 256 aa18.55■□□□□ 0.56
LINC01960-201ENST00000563759 ADH4P08319 380 aa18.54■□□□□ 0.56
LINC01960-201ENST00000563759 IGFBP2P18065 325 aa18.54■□□□□ 0.56
LINC01960-201ENST00000563759 GLRA1P23415 457 aa18.54■□□□□ 0.56
LINC01960-201ENST00000563759 GATA4P43694 442 aa18.54■□□□□ 0.56
LINC01960-201ENST00000563759 MRPS15P82914 257 aaKnown RBP18.54■□□□□ 0.56
LINC01960-201ENST00000563759 DYRK1AQ13627 763 aa18.54■□□□□ 0.56
LINC01960-201ENST00000563759 GDPD3Q7L5L3 318 aa18.54■□□□□ 0.56
LINC01960-201ENST00000563759 MUC15Q8N387 334 aa18.54■□□□□ 0.56
LINC01960-201ENST00000563759 FAAP24Q9BTP7 215 aa18.54■□□□□ 0.56
LINC01960-201ENST00000563759 SPTAN1Q13813 2472 aaKnown RBP18.54■□□□□ 0.56
LINC01960-201ENST00000563759 H3BUI4 141 aa18.54■□□□□ 0.56
LINC01960-201ENST00000563759 SSX5O60225 188 aa18.54■□□□□ 0.56
LINC01960-201ENST00000563759 RCVRNP35243 200 aa18.54■□□□□ 0.56
LINC01960-201ENST00000563759 RFX2P48378 723 aa18.54■□□□□ 0.56
LINC01960-201ENST00000563759 CCL8P80075 99 aa18.54■□□□□ 0.56
LINC01960-201ENST00000563759 BRICD5Q6PL45 260 aa18.54■□□□□ 0.56
LINC01960-201ENST00000563759 SULT4A1Q9BR01 284 aa18.54■□□□□ 0.56
LINC01960-201ENST00000563759 C7orf50Q9BRJ6 194 aaKnown RBP18.54■□□□□ 0.56
LINC01960-201ENST00000563759 WDR13Q9H1Z4 485 aa18.54■□□□□ 0.56
LINC01960-201ENST00000563759 SPACA1Q9HBV2 294 aa18.54■□□□□ 0.56
LINC01960-201ENST00000563759 HES4Q9HCC6 221 aa18.54■□□□□ 0.56
LINC01960-201ENST00000563759 WNT9BO14905 357 aa18.53■□□□□ 0.56
LINC01960-201ENST00000563759 MT-ND4P03905 459 aa18.53■□□□□ 0.56
LINC01960-201ENST00000563759 TNFRSF1AP19438 455 aa18.53■□□□□ 0.56
LINC01960-201ENST00000563759 SNRPD2P62316 118 aaKnown RBP18.53■□□□□ 0.56
LINC01960-201ENST00000563759 SMIM21Q3B7S5 101 aa18.53■□□□□ 0.56
LINC01960-201ENST00000563759 SPIN3Q5JUX0 258 aa18.53■□□□□ 0.56
LINC01960-201ENST00000563759 ZCCHC24Q8N2G6 241 aaKnown RBP18.53■□□□□ 0.56
LINC01960-201ENST00000563759 FBXW5Q969U6 566 aa18.53■□□□□ 0.56
LINC01960-201ENST00000563759 AK3Q9UIJ7 227 aa18.53■□□□□ 0.56
LINC01960-201ENST00000563759 TANC2Q9HCD6 1990 aa18.53■□□□□ 0.56
LINC01960-201ENST00000563759 CA11O75493 328 aa18.52■□□□□ 0.56
LINC01960-201ENST00000563759 CD55P08174 381 aa18.52■□□□□ 0.56
LINC01960-201ENST00000563759 RNF224P0DH78 156 aa18.52■□□□□ 0.56
LINC01960-201ENST00000563759 ZNF44P15621 663 aa18.52■□□□□ 0.56
LINC01960-201ENST00000563759 FAUP35544 74 aaKnown RBP18.52■□□□□ 0.56
LINC01960-201ENST00000563759 TAS2R19P59542 299 aa18.52■□□□□ 0.56
LINC01960-201ENST00000563759 FAM209AQ5JX71 171 aa18.52■□□□□ 0.56
LINC01960-201ENST00000563759 GVQW1Q8N7I0 195 aa18.52■□□□□ 0.56
LINC01960-201ENST00000563759 OR10Z1Q8NGY1 313 aa18.52■□□□□ 0.56
LINC01960-201ENST00000563759 EGLN1Q9GZT9 426 aa18.52■□□□□ 0.56
LINC01960-201ENST00000563759 MS4A5Q9H3V2 200 aa18.52■□□□□ 0.56
LINC01960-201ENST00000563759 GCM1Q9NP62 436 aa18.52■□□□□ 0.56
LINC01960-201ENST00000563759 DECR2Q9NUI1 292 aa18.52■□□□□ 0.56
LINC01960-201ENST00000563759 RCC2Q9P258 522 aaKnown RBP18.52■□□□□ 0.56
LINC01960-201ENST00000563759 A0A1B0GVG6 124 aa18.52■□□□□ 0.55
LINC01960-201ENST00000563759 FAM240BA0A1B0GVZ2 78 aa18.52■□□□□ 0.55
LINC01960-201ENST00000563759 UBE2QL1A1L167 161 aa18.52■□□□□ 0.55
LINC01960-201ENST00000563759 HSPB6O14558 160 aa18.52■□□□□ 0.55
LINC01960-201ENST00000563759 CBX5P45973 191 aa18.52■□□□□ 0.55
LINC01960-201ENST00000563759 HOXA4Q00056 320 aaPredicted RBP18.52■□□□□ 0.55
LINC01960-201ENST00000563759 TESK1Q15569 626 aa18.52■□□□□ 0.55
LINC01960-201ENST00000563759 MEX3BQ6ZN04 569 aaKnown RBP18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms