RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 PI3P19957 117 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 KLK2P20151 261 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 OTX1P32242 354 aaPredicted RBP5.58□□□□□ -1.52
CLK3-212ENST00000563418 RABIFP47224 123 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 RIPPLY3P57055 190 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 RPL27P61353 136 aaKnown RBP5.58□□□□□ -1.52
CLK3-212ENST00000563418 OR8B8Q15620 311 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 PLCXD3Q63HM9 321 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 Q6ZVL8 140 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 H2BFWTQ7Z2G1 175 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 HOGA1Q86XE5 327 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 SLC35A4Q96G79 324 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 LHX9Q9NQ69 397 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 APOBEC3BQ9UH17 382 aaKnown RBP5.58□□□□□ -1.52
CLK3-212ENST00000563418 IGLV3-10A0A075B6K4 115 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 TMEM238C9JI98 176 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 CST7O76096 145 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 CCR5P51681 352 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 LIAT1Q6ZQX7 453 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 KMT5CQ86Y97 462 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 OR2I1PQ8NGU4 316 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 GLIS2Q9BZE0 524 aaPredicted RBP5.58□□□□□ -1.52
CLK3-212ENST00000563418 ENTPD2Q9Y5L3 495 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 COL11A1P12107 1806 aaPredicted RBP5.57□□□□□ -1.52
CLK3-212ENST00000563418 SERINC4A6NH21 518 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 A6NNC1 897 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 GCM2O75603 506 aaPredicted RBP5.57□□□□□ -1.52
CLK3-212ENST00000563418 GZMBP10144 247 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 COL10A1Q03692 680 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 SPANXN5Q5MJ07 72 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 OR8I2Q8N0Y5 310 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 KLK6Q92876 244 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 TMEM186Q96B77 213 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 C5orf30Q96GV9 206 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 S1PR5Q9H228 398 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 ST3GAL6Q9Y274 331 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 VDAC1P21796 283 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 LBX2Q6XYB7 198 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 LHFPL2Q6ZUX7 228 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 FAM57BQ71RH2 274 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 PP6455Q8WZ26 134 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 MRPL18Q9H0U6 180 aaKnown RBP5.57□□□□□ -1.52
CLK3-212ENST00000563418 HS3ST2Q9Y278 367 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 PAPPAQ13219 1627 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 EREGO14944 169 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 NXPH2O95156 264 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 PEX11BO96011 259 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 RHOBP62745 196 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 CYP2G1PQ6ZSU1 146 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 OR52N5Q8NH56 324 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 WDYHV1Q96HA8 205 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 CDH20Q9HBT6 801 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 SPCS1Q9Y6A9 102 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 A0A0U1RQS6 177 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 CORTO00230 105 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 CTSVO60911 334 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 IER3P46695 156 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 CXCL9Q07325 125 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 ACKR1Q16570 336 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 CARD17Q5XLA6 110 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 SOCS4Q8WXH5 440 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 RARRES2Q99969 163 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 SEPSECSQ9HD40 501 aaKnown RBP5.57□□□□□ -1.52
CLK3-212ENST00000563418 YBX2Q9Y2T7 364 aaKnown RBP5.57□□□□□ -1.52
CLK3-212ENST00000563418 HCRTO43612 131 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 SUB1P53999 127 aaKnown RBP eCLIP5.57□□□□□ -1.52
CLK3-212ENST00000563418 PRICKLE4Q2TBC4 344 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 FAM71F2Q6NXP2 309 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 OR8B3Q8NGG8 313 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 FAM117AQ9C073 453 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 PRDM13Q9H4Q3 707 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 TMEM167BQ9NRX6 74 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 OR7C1O76099 320 aaPredicted RBP5.57□□□□□ -1.52
CLK3-212ENST00000563418 F13BP05160 661 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 ROM1Q03395 351 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 MZT1Q08AG7 82 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 DUSP5Q16690 384 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 PRRG4Q9BZD6 226 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 HDGFL3Q9Y3E1 203 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 A0A1B0GU03 582 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 SDCBPO00560 298 aaPredicted RBP5.57□□□□□ -1.52
CLK3-212ENST00000563418 GPR75O95800 540 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 LINC00869P0C866 280 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 NPY1RP25929 384 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 TPTE2P1Q5T6R2 138 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 Q6ZVU0 165 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 MRAP2Q96G30 205 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 PTRH2Q9Y3E5 179 aaKnown RBP5.57□□□□□ -1.52
CLK3-212ENST00000563418 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.57□□□□□ -1.52
CLK3-212ENST00000563418 C3orf85A0A1B0GTC6 90 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 GLRA1P23415 457 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 C4orf45Q96LM5 186 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 CST9LQ9H4G1 147 aa5.57□□□□□ -1.52
CLK3-212ENST00000563418 BCAT2O15382 392 aaPredicted RBP5.56□□□□□ -1.52
CLK3-212ENST00000563418 MMP23AO75900 390 aa5.56□□□□□ -1.52
CLK3-212ENST00000563418 HIST1H1AQ02539 215 aaPredicted RBP5.56□□□□□ -1.52
CLK3-212ENST00000563418 PAX2Q02962 417 aa5.56□□□□□ -1.52
CLK3-212ENST00000563418 HYAL1Q12794 435 aa5.56□□□□□ -1.52
CLK3-212ENST00000563418 ELAVL3Q14576 367 aaKnown RBP5.56□□□□□ -1.52
CLK3-212ENST00000563418 RNF175Q8N4F7 328 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms