RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 OR3A4PP47883 348 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 ARF6P62330 175 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 COL10A1Q03692 680 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 GPR50Q13585 617 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 ZNF146Q15072 292 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 MED22Q15528 200 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 FAM27D1Q5T7N8 215 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 Q6P435 159 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 C17orf107Q6ZR85 190 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 Q8IYB0 196 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 TEX29Q8N6K0 151 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 PNLDC1Q8NA58 520 aaKnown RBP7.03□□□□□ -1.28
UBR1-204ENST00000563239 TMEM185AQ8NFB2 350 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 Q8NFD4 153 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 PXT1Q8NFP0 134 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 EMG1Q92979 244 aaKnown RBP7.03□□□□□ -1.28
UBR1-204ENST00000563239 DMRTB1Q96MA1 342 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 MDFIQ99750 246 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 KRTAP3-3Q9BYR6 98 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 KRTAP3-2Q9BYR7 98 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 PPIL3Q9H2H8 161 aaKnown RBP7.03□□□□□ -1.28
UBR1-204ENST00000563239 ISYNA1Q9NPH2 558 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 NOX4Q9NPH5 578 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 TMEM138Q9NPI0 162 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 C19orf12Q9NSK7 152 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 NUP50Q9UKX7 468 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 SF3B6Q9Y3B4 125 aaKnown RBP7.03□□□□□ -1.28
UBR1-204ENST00000563239 CENPVL3A0A0U1RRI6 287 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 PSPNO60542 156 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 TOX4O94842 621 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 VENTXO95231 258 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 HAND1O96004 215 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 CYB5AP00167 134 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 IFNA2P01563 188 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 CHRM2P08172 466 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 OCMP0CE72 109 aaPredicted RBP7.02□□□□□ -1.29
UBR1-204ENST00000563239 TMEM225BP0DP42 221 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 PRKACAP17612 351 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 BDKRB2P30411 391 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 PTGFRP43088 359 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 SNU13P55769 128 aaKnown RBP7.02□□□□□ -1.29
UBR1-204ENST00000563239 DLX1P56177 255 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 GABARAPL2P60520 117 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 EMX1Q04741 257 aaPredicted RBP7.02□□□□□ -1.29
UBR1-204ENST00000563239 MLLT11Q13015 90 aaPredicted RBP7.02□□□□□ -1.29
UBR1-204ENST00000563239 TBCEQ15813 527 aaPredicted RBP7.02□□□□□ -1.29
UBR1-204ENST00000563239 ACSM3Q53FZ2 586 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 ARMCX4Q5H9R4 360 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 DDI2Q5TDH0 399 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 LIPKQ5VXJ0 399 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 TMEM200BQ69YZ2 307 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 ELP2Q6IA86 826 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 TMEM91Q6ZNR0 172 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 C9orf139Q6ZV77 190 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 TCF23Q7RTU1 214 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 LRRTM1Q86UE6 522 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 SATL1Q86VE3 508 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 C11orf42Q8N5U0 333 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 KIR3DL3Q8N743 410 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 TNFAIP8L1Q8WVP5 186 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 C22orf15Q8WYQ4 148 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 H1FXQ92522 213 aaKnown RBP7.02□□□□□ -1.29
UBR1-204ENST00000563239 TNFRSF14Q92956 283 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 ZNF48Q96MX3 618 aaPredicted RBP7.02□□□□□ -1.29
UBR1-204ENST00000563239 SLC6A7Q99884 636 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 PCGF1Q9BSM1 259 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 TMED9Q9BVK6 235 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 CCDC90BQ9GZT6 254 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 FAM234AQ9H0X4 552 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 RHOFQ9HBH0 211 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 NEK6Q9HC98 313 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 ACOT13Q9NPJ3 140 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 FOXJ3Q9UPW0 622 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 KPTNQ9Y664 436 aa7.02□□□□□ -1.29
UBR1-204ENST00000563239 TRBV23-1A0A0A0MS06 115 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 TRAV40A0A0B4J280 105 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 RRP9O43818 475 aaKnown RBP7.01□□□□□ -1.29
UBR1-204ENST00000563239 RGS9O75916 674 aaPredicted RBP7.01□□□□□ -1.29
UBR1-204ENST00000563239 CDRT1O95170 752 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 OR2H2O95918 312 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 CD37P11049 281 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 CPEP16870 476 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 LMO1P25800 156 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 ZNF93P35789 620 aaPredicted RBP7.01□□□□□ -1.29
UBR1-204ENST00000563239 OR3A1P47881 315 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 CAPZA1P52907 286 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 DLX6P56179 175 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 ERVFRD-1P60508 538 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 RPS25P62851 125 aaKnown RBP7.01□□□□□ -1.29
UBR1-204ENST00000563239 PPP3R1P63098 170 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 PRB3Q04118 309 aaPredicted RBP7.01□□□□□ -1.29
UBR1-204ENST00000563239 ZNF273Q14593 569 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 PDCD1Q15116 288 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 SSX1Q16384 188 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 KRTAP24-1Q3LI83 254 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 SPIN3Q5JUX0 258 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 METTL11BQ5VVY1 283 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 RUSC1-AS1Q66K80 236 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 HCP5Q6MZN7 132 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 C1orf122Q6ZSJ8 110 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms