RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 SATL1Q86VE3 508 aa12.98□□□□□ -0.33
USB1-208ENST00000563207 TEX29Q8N6K0 151 aa12.98□□□□□ -0.33
USB1-208ENST00000563207 OR8B3Q8NGG8 313 aa12.98□□□□□ -0.33
USB1-208ENST00000563207 DACT3Q96B18 629 aaPredicted RBP12.98□□□□□ -0.33
USB1-208ENST00000563207 SPACA5Q96QH8 159 aa12.98□□□□□ -0.33
USB1-208ENST00000563207 OR8B2Q96RD0 313 aa12.98□□□□□ -0.33
USB1-208ENST00000563207 JMJD8Q96S16 334 aa12.98□□□□□ -0.33
USB1-208ENST00000563207 UQCC2Q9BRT2 126 aa12.98□□□□□ -0.33
USB1-208ENST00000563207 WDR13Q9H1Z4 485 aa12.98□□□□□ -0.33
USB1-208ENST00000563207 SEBOXQ9HB31 216 aaPredicted RBP12.98□□□□□ -0.33
USB1-208ENST00000563207 PCDHB16Q9NRJ7 776 aa12.98□□□□□ -0.33
USB1-208ENST00000563207 PKD1L1Q8TDX9 2849 aa12.98□□□□□ -0.33
USB1-208ENST00000563207 MAGEA13PA6NCF6 341 aa12.97□□□□□ -0.33
USB1-208ENST00000563207 OR2AT4A6NND4 320 aa12.97□□□□□ -0.33
USB1-208ENST00000563207 KDM4BO94953 1096 aa12.97□□□□□ -0.33
USB1-208ENST00000563207 PLATP00750 562 aa12.97□□□□□ -0.33
USB1-208ENST00000563207 KNG1P01042 644 aa12.97□□□□□ -0.33
USB1-208ENST00000563207 MAS1P04201 325 aa12.97□□□□□ -0.33
USB1-208ENST00000563207 TMEM225BP0DP42 221 aa12.97□□□□□ -0.33
USB1-208ENST00000563207 FPR2P25090 351 aa12.97□□□□□ -0.33
USB1-208ENST00000563207 FGF9P31371 208 aaPredicted RBP12.97□□□□□ -0.33
USB1-208ENST00000563207 PTGFRP43088 359 aa12.97□□□□□ -0.33
USB1-208ENST00000563207 PSMD7P51665 324 aa12.97□□□□□ -0.33
USB1-208ENST00000563207 GP2P55259 537 aaKnown RBP12.97□□□□□ -0.33
USB1-208ENST00000563207 INSL4Q14641 139 aa12.97□□□□□ -0.33
USB1-208ENST00000563207 GLT8D1Q68CQ7 371 aa12.97□□□□□ -0.33
USB1-208ENST00000563207 STUMQ69YW2 141 aa12.97□□□□□ -0.33
USB1-208ENST00000563207 ASCL4Q6XD76 172 aa12.97□□□□□ -0.33
USB1-208ENST00000563207 ANGPTL6Q8NI99 470 aa12.97□□□□□ -0.33
USB1-208ENST00000563207 SLAMF9Q96A28 289 aa12.97□□□□□ -0.33
USB1-208ENST00000563207 RFT1Q96AA3 541 aa12.97□□□□□ -0.33
USB1-208ENST00000563207 ORAI1Q96D31 301 aa12.97□□□□□ -0.33
USB1-208ENST00000563207 MED30Q96HR3 178 aa12.97□□□□□ -0.33
USB1-208ENST00000563207 S100A13Q99584 98 aa12.97□□□□□ -0.33
USB1-208ENST00000563207 SSBP3Q9BWW4 388 aaPredicted RBP12.97□□□□□ -0.33
USB1-208ENST00000563207 SMURF1Q9HCE7 757 aa12.97□□□□□ -0.33
USB1-208ENST00000563207 SNTG1Q9NSN8 517 aa12.97□□□□□ -0.33
USB1-208ENST00000563207 STUB1Q9UNE7 303 aa12.97□□□□□ -0.33
USB1-208ENST00000563207 TRAV1-2A0A0B4J238 106 aa12.96□□□□□ -0.33
USB1-208ENST00000563207 GPR37O15354 613 aa12.96□□□□□ -0.33
USB1-208ENST00000563207 ADAM20O43506 726 aa12.96□□□□□ -0.33
USB1-208ENST00000563207 SPRY1O43609 319 aaPredicted RBP12.96□□□□□ -0.33
USB1-208ENST00000563207 ZNF780AO75290 641 aaPredicted RBP12.96□□□□□ -0.33
USB1-208ENST00000563207 GYPAP02724 150 aa12.96□□□□□ -0.33
USB1-208ENST00000563207 PSG2P11465 335 aa12.96□□□□□ -0.33
USB1-208ENST00000563207 GPR176Q14439 515 aa12.96□□□□□ -0.33
USB1-208ENST00000563207 TIMM50Q3ZCQ8 353 aa12.96□□□□□ -0.33
USB1-208ENST00000563207 FAM27D1Q5T7N8 215 aa12.96□□□□□ -0.33
USB1-208ENST00000563207 ELP2Q6IA86 826 aa12.96□□□□□ -0.33
USB1-208ENST00000563207 ZNF841Q6ZN19 808 aa12.96□□□□□ -0.33
USB1-208ENST00000563207 GDPGP1Q6ZNW5 385 aa12.96□□□□□ -0.33
USB1-208ENST00000563207 FAM58AQ8N1B3 248 aa12.96□□□□□ -0.33
USB1-208ENST00000563207 TNFAIP8L1Q8WVP5 186 aa12.96□□□□□ -0.33
USB1-208ENST00000563207 MRPS26Q9BYN8 205 aaKnown RBP12.96□□□□□ -0.33
USB1-208ENST00000563207 PPIL3Q9H2H8 161 aaKnown RBP12.96□□□□□ -0.33
USB1-208ENST00000563207 IL36GQ9NZH8 169 aa12.96□□□□□ -0.33
USB1-208ENST00000563207 GHRLQ9UBU3 117 aa12.96□□□□□ -0.33
USB1-208ENST00000563207 OR5V1Q9UGF6 321 aa12.96□□□□□ -0.33
USB1-208ENST00000563207 GLS2Q9UI32 602 aa12.96□□□□□ -0.33
USB1-208ENST00000563207 SSR3Q9UNL2 185 aa12.96□□□□□ -0.33
USB1-208ENST00000563207 GSTK1Q9Y2Q3 226 aa12.96□□□□□ -0.33
USB1-208ENST00000563207 IGHV3OR15-7A0A075B7D8 119 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 IGHV2-70DA0A0C4DH43 119 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 NKX6-3A6NJ46 265 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 TMPRSS2O15393 492 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 FCN3O75636 299 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 CD37P11049 281 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 CD36P16671 472 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 CALRP27797 417 aaKnown RBP12.95□□□□□ -0.34
USB1-208ENST00000563207 PITPNBP48739 271 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 MTNR1BP49286 362 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 GMFBP60983 142 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 GNB2P62879 340 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 IL13RA1P78552 427 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 ZNF146Q15072 292 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 SPIN3Q5JUX0 258 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 ZNF788Q6ZQV5 615 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 LRRTM1Q86UE6 522 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 LYPD6Q86Y78 171 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 JAGN1Q8N5M9 183 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 Q8NFD4 153 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 OR5D18Q8NGL1 313 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 RAB40AQ8WXH6 277 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 EMG1Q92979 244 aaKnown RBP12.95□□□□□ -0.34
USB1-208ENST00000563207 SDSLQ96GA7 329 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 ZNF488Q96MN9 340 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 MRI1Q9BV20 369 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 METTL9Q9H1A3 318 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 HMG20AQ9NP66 347 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 CTSZQ9UBR2 303 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 CLN8Q9UBY8 286 aa12.95□□□□□ -0.34
USB1-208ENST00000563207 IGKV1-12A0A0C4DH73 117 aa12.94□□□□□ -0.34
USB1-208ENST00000563207 RFPL4AA6NLU0 287 aa12.94□□□□□ -0.34
USB1-208ENST00000563207 C22orf46C9J442 243 aa12.94□□□□□ -0.34
USB1-208ENST00000563207 RFPL4AL1F8VTS6 287 aa12.94□□□□□ -0.34
USB1-208ENST00000563207 PDCD5O14737 125 aa12.94□□□□□ -0.34
USB1-208ENST00000563207 ANGPTL7O43827 346 aa12.94□□□□□ -0.34
USB1-208ENST00000563207 IGKV1D-12P01611 117 aa12.94□□□□□ -0.34
USB1-208ENST00000563207 BCL3P20749 454 aa12.94□□□□□ -0.34
USB1-208ENST00000563207 PRTN3P24158 256 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms