RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 PSMA1P25786 263 aaKnown RBP13.82□□□□□ -0.2
CLK3-207ENST00000562389 ZNF93P35789 620 aaPredicted RBP13.82□□□□□ -0.2
CLK3-207ENST00000562389 EMX1Q04741 257 aaPredicted RBP13.82□□□□□ -0.2
CLK3-207ENST00000562389 ZNF146Q15072 292 aa13.82□□□□□ -0.2
CLK3-207ENST00000562389 TRAM1Q15629 374 aa13.82□□□□□ -0.2
CLK3-207ENST00000562389 TNFAIP8L1Q8WVP5 186 aa13.82□□□□□ -0.2
CLK3-207ENST00000562389 FAM234AQ9H0X4 552 aa13.82□□□□□ -0.2
CLK3-207ENST00000562389 IL36RNQ9UBH0 155 aa13.82□□□□□ -0.2
CLK3-207ENST00000562389 LRRC42Q9Y546 428 aa13.82□□□□□ -0.2
CLK3-207ENST00000562389 NAV3Q8IVL0 2385 aa13.81□□□□□ -0.2
CLK3-207ENST00000562389 HAND1O96004 215 aa13.81□□□□□ -0.2
CLK3-207ENST00000562389 MTNR1BP49286 362 aa13.81□□□□□ -0.2
CLK3-207ENST00000562389 BMXP51813 675 aa13.81□□□□□ -0.2
CLK3-207ENST00000562389 CAPZA1P52907 286 aa13.81□□□□□ -0.2
CLK3-207ENST00000562389 FGF12P61328 243 aa13.81□□□□□ -0.2
CLK3-207ENST00000562389 COL10A1Q03692 680 aa13.81□□□□□ -0.2
CLK3-207ENST00000562389 SCGB2A2Q13296 93 aa13.81□□□□□ -0.2
CLK3-207ENST00000562389 INSL4Q14641 139 aa13.81□□□□□ -0.2
CLK3-207ENST00000562389 ARMCX4Q5H9R4 360 aa13.81□□□□□ -0.2
CLK3-207ENST00000562389 ELP2Q6IA86 826 aa13.81□□□□□ -0.2
CLK3-207ENST00000562389 ASCL4Q6XD76 172 aa13.81□□□□□ -0.2
CLK3-207ENST00000562389 CDH26Q8IXH8 852 aa13.81□□□□□ -0.2
CLK3-207ENST00000562389 PHC2Q8IXK0 858 aa13.81□□□□□ -0.2
CLK3-207ENST00000562389 SPARTQ8N0X7 666 aa13.81□□□□□ -0.2
CLK3-207ENST00000562389 H1FXQ92522 213 aaKnown RBP13.81□□□□□ -0.2
CLK3-207ENST00000562389 UPRTQ96BW1 309 aa13.81□□□□□ -0.2
CLK3-207ENST00000562389 FAM192AQ9GZU8 254 aa13.81□□□□□ -0.2
CLK3-207ENST00000562389 CNTD2Q9H8S5 307 aa13.81□□□□□ -0.2
CLK3-207ENST00000562389 GLS2Q9UI32 602 aa13.81□□□□□ -0.2
CLK3-207ENST00000562389 SF3B6Q9Y3B4 125 aaKnown RBP13.81□□□□□ -0.2
CLK3-207ENST00000562389 SETD2Q9BYW2 2564 aaPredicted RBP13.81□□□□□ -0.2
CLK3-207ENST00000562389 TRBV23-1A0A0A0MS06 115 aa13.8□□□□□ -0.2
CLK3-207ENST00000562389 K7N7A8 449 aa13.8□□□□□ -0.2
CLK3-207ENST00000562389 ZNF737O75373 536 aa13.8□□□□□ -0.2
CLK3-207ENST00000562389 IFNA2P01563 188 aa13.8□□□□□ -0.2
CLK3-207ENST00000562389 TK1P04183 234 aa13.8□□□□□ -0.2
CLK3-207ENST00000562389 MAS1P04201 325 aa13.8□□□□□ -0.2
CLK3-207ENST00000562389 MMP9P14780 707 aa13.8□□□□□ -0.2
CLK3-207ENST00000562389 PTGFRP43088 359 aa13.8□□□□□ -0.2
CLK3-207ENST00000562389 OR3A4PP47883 348 aa13.8□□□□□ -0.2
CLK3-207ENST00000562389 RPS25P62851 125 aaKnown RBP13.8□□□□□ -0.2
CLK3-207ENST00000562389 KCTD21Q4G0X4 260 aa13.8□□□□□ -0.2
CLK3-207ENST00000562389 UBE2UQ5VVX9 321 aa13.8□□□□□ -0.2
CLK3-207ENST00000562389 PRIMA1Q86XR5 153 aa13.8□□□□□ -0.2
CLK3-207ENST00000562389 KIR3DL3Q8N743 410 aa13.8□□□□□ -0.2
CLK3-207ENST00000562389 NKAIN3Q8N8D7 197 aa13.8□□□□□ -0.2
CLK3-207ENST00000562389 Q8NFD4 153 aa13.8□□□□□ -0.2
CLK3-207ENST00000562389 PHYHIPQ92561 330 aa13.8□□□□□ -0.2
CLK3-207ENST00000562389 FCGR1BQ92637 280 aa13.8□□□□□ -0.2
CLK3-207ENST00000562389 NKX3-1Q99801 234 aaPredicted RBP13.8□□□□□ -0.2
CLK3-207ENST00000562389 ELL3Q9HB65 397 aaPredicted RBP13.8□□□□□ -0.2
CLK3-207ENST00000562389 IL36GQ9NZH8 169 aa13.8□□□□□ -0.2
CLK3-207ENST00000562389 KPTNQ9Y664 436 aa13.8□□□□□ -0.2
CLK3-207ENST00000562389 UCHL1P09936 223 aa13.79□□□□□ -0.2
CLK3-207ENST00000562389 CALCBP10092 127 aa13.79□□□□□ -0.2
CLK3-207ENST00000562389 GABRA5P31644 462 aa13.79□□□□□ -0.2
CLK3-207ENST00000562389 GP2P55259 537 aaKnown RBP13.79□□□□□ -0.2
CLK3-207ENST00000562389 KLF17Q5JT82 389 aaPredicted RBP13.79□□□□□ -0.2
CLK3-207ENST00000562389 FAM27D1Q5T7N8 215 aa13.79□□□□□ -0.2
CLK3-207ENST00000562389 METTL11BQ5VVY1 283 aa13.79□□□□□ -0.2
CLK3-207ENST00000562389 ZNF773Q6PK81 442 aa13.79□□□□□ -0.2
CLK3-207ENST00000562389 TMEM91Q6ZNR0 172 aa13.79□□□□□ -0.2
CLK3-207ENST00000562389 CEACAM19Q7Z692 300 aa13.79□□□□□ -0.2
CLK3-207ENST00000562389 LYPD6Q86Y78 171 aa13.79□□□□□ -0.2
CLK3-207ENST00000562389 ASCC1Q8N9N2 400 aaKnown RBP13.79□□□□□ -0.2
CLK3-207ENST00000562389 TMEM203Q969S6 136 aa13.79□□□□□ -0.2
CLK3-207ENST00000562389 SNX22Q96L94 193 aa13.79□□□□□ -0.2
CLK3-207ENST00000562389 WDFY2Q96P53 400 aa13.79□□□□□ -0.2
CLK3-207ENST00000562389 SIRPDQ9H106 197 aa13.79□□□□□ -0.2
CLK3-207ENST00000562389 TCF7L1Q9HCS4 588 aa13.79□□□□□ -0.2
CLK3-207ENST00000562389 EXOSC4Q9NPD3 245 aaKnown RBP13.79□□□□□ -0.2
CLK3-207ENST00000562389 GSTK1Q9Y2Q3 226 aa13.79□□□□□ -0.2
CLK3-207ENST00000562389 DSCAML1Q8TD84 2053 aa13.78□□□□□ -0.2
CLK3-207ENST00000562389 MEGF11A6BM72 1044 aa13.78□□□□□ -0.2
CLK3-207ENST00000562389 SH2D1BO14796 132 aa13.78□□□□□ -0.2
CLK3-207ENST00000562389 RGS9O75916 674 aaPredicted RBP13.78□□□□□ -0.2
CLK3-207ENST00000562389 TOX4O94842 621 aa13.78□□□□□ -0.2
CLK3-207ENST00000562389 EPHA1P21709 976 aa13.78□□□□□ -0.2
CLK3-207ENST00000562389 DUSP1P28562 367 aa13.78□□□□□ -0.2
CLK3-207ENST00000562389 SNU13P55769 128 aaKnown RBP13.78□□□□□ -0.2
CLK3-207ENST00000562389 ARF6P62330 175 aa13.78□□□□□ -0.2
CLK3-207ENST00000562389 RSU1Q15404 277 aa13.78□□□□□ -0.2
CLK3-207ENST00000562389 SSX1Q16384 188 aa13.78□□□□□ -0.2
CLK3-207ENST00000562389 KRTAP21-3Q3LHN1 58 aa13.78□□□□□ -0.2
CLK3-207ENST00000562389 HSD17B12Q53GQ0 312 aa13.78□□□□□ -0.2
CLK3-207ENST00000562389 OR8H2Q8N162 312 aa13.78□□□□□ -0.2
CLK3-207ENST00000562389 JAGN1Q8N5M9 183 aa13.78□□□□□ -0.2
CLK3-207ENST00000562389 OR51T1Q8NGJ9 327 aa13.78□□□□□ -0.2
CLK3-207ENST00000562389 OR5D13Q8NGL4 314 aa13.78□□□□□ -0.2
CLK3-207ENST00000562389 TBX15Q96SF7 602 aa13.78□□□□□ -0.2
CLK3-207ENST00000562389 METTL9Q9H1A3 318 aa13.78□□□□□ -0.2
CLK3-207ENST00000562389 NDUFB11Q9NX14 153 aa13.78□□□□□ -0.2
CLK3-207ENST00000562389 NUP50Q9UKX7 468 aa13.78□□□□□ -0.2
CLK3-207ENST00000562389 NF1P21359 2839 aa13.77□□□□□ -0.2
CLK3-207ENST00000562389 A0A1W2PQ09 198 aa13.77□□□□□ -0.21
CLK3-207ENST00000562389 TMEM82A0PJX8 343 aa13.77□□□□□ -0.21
CLK3-207ENST00000562389 CDRT1O95170 752 aa13.77□□□□□ -0.21
CLK3-207ENST00000562389 OR2H2O95918 312 aa13.77□□□□□ -0.21
CLK3-207ENST00000562389 SRMP19623 302 aa13.77□□□□□ -0.21
CLK3-207ENST00000562389 LMO1P25800 156 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms