RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 S100PBPQ96BU1 408 aa3.55□□□□□ -1.84
SMG1-204ENST00000561940 EMC6Q9BV81 110 aa3.55□□□□□ -1.84
SMG1-204ENST00000561940 EYSQ5T1H1 3165 aa3.55□□□□□ -1.84
SMG1-204ENST00000561940 KMT2BQ9UMN6 2715 aaPredicted RBP3.55□□□□□ -1.84
SMG1-204ENST00000561940 FLNBO75369 2602 aaKnown RBP3.55□□□□□ -1.84
SMG1-204ENST00000561940 CACNA1HO95180 2353 aa3.54□□□□□ -1.84
SMG1-204ENST00000561940 ROCK2O75116 1388 aaKnown RBP3.54□□□□□ -1.84
SMG1-204ENST00000561940 CENPVL3A0A0U1RRI6 287 aa3.54□□□□□ -1.84
SMG1-204ENST00000561940 TRAPPC6AO75865 159 aa3.54□□□□□ -1.84
SMG1-204ENST00000561940 TTC4O95801 387 aa3.54□□□□□ -1.84
SMG1-204ENST00000561940 PTHP01270 115 aa3.54□□□□□ -1.84
SMG1-204ENST00000561940 HSPD1P10809 573 aaKnown RBP3.54□□□□□ -1.84
SMG1-204ENST00000561940 PRLHRP49683 370 aa3.54□□□□□ -1.84
SMG1-204ENST00000561940 SLC35A1P78382 337 aa3.54□□□□□ -1.84
SMG1-204ENST00000561940 ATP6V1FQ16864 119 aa3.54□□□□□ -1.84
SMG1-204ENST00000561940 CPTPQ5TA50 214 aa3.54□□□□□ -1.84
SMG1-204ENST00000561940 GUSBP11Q6P575 273 aa3.54□□□□□ -1.84
SMG1-204ENST00000561940 Q6ZSR6 202 aa3.54□□□□□ -1.84
SMG1-204ENST00000561940 BHLHA15Q7RTS1 189 aaPredicted RBP3.54□□□□□ -1.84
SMG1-204ENST00000561940 H1FOOQ8IZA3 346 aaPredicted RBP3.54□□□□□ -1.84
SMG1-204ENST00000561940 RNF170Q96K19 258 aa3.54□□□□□ -1.84
SMG1-204ENST00000561940 RSPO3Q9BXY4 272 aaPredicted RBP3.54□□□□□ -1.84
SMG1-204ENST00000561940 HEBP1Q9NRV9 189 aa3.54□□□□□ -1.84
SMG1-204ENST00000561940 BZW2Q9Y6E2 419 aaKnown RBP3.54□□□□□ -1.84
SMG1-204ENST00000561940 SCN7AQ01118 1682 aa3.54□□□□□ -1.84
SMG1-204ENST00000561940 FAM186AA6NE01 2351 aa3.54□□□□□ -1.84
SMG1-204ENST00000561940 ANKRD11Q6UB99 2663 aaPredicted RBP3.54□□□□□ -1.84
SMG1-204ENST00000561940 CHD6Q8TD26 2715 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 PSPHP1O15172 72 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 SPOPO43791 374 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 PLIN3O60664 434 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 S100A9P06702 114 aaKnown RBP3.53□□□□□ -1.84
SMG1-204ENST00000561940 IL1RNP18510 177 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 GNRHRP30968 328 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 GALR1P47211 349 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 PSMC5P62195 406 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 KDSRQ06136 332 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 ZCCHC24Q8N2G6 241 aaKnown RBP3.53□□□□□ -1.84
SMG1-204ENST00000561940 CYB561A3Q8NBI2 242 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 OR13C9Q8NGT0 318 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 OR6K6Q8NGW6 343 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 ENKURQ8TC29 256 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 CIDECQ96AQ7 238 aaPredicted RBP3.53□□□□□ -1.84
SMG1-204ENST00000561940 CENPNQ96H22 339 aaPredicted RBP3.53□□□□□ -1.84
SMG1-204ENST00000561940 LINC00477Q96M19 166 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 SFXN3Q9BWM7 321 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 MAP1LC3CQ9BXW4 147 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 TM6SF2Q9BZW4 377 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 COA1Q9GZY4 146 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 PLEKHF2Q9H8W4 249 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 PPIL1Q9Y3C6 166 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 CBY1Q9Y3M2 126 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 MTCH2Q9Y6C9 303 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 NCOR2Q9Y618 2525 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 CFAP54Q96N23 3096 aa3.53□□□□□ -1.84
SMG1-204ENST00000561940 FAM208BQ5VWN6 2430 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 DYSFO75923 2080 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 GOLGA8JA6NMD2 632 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 RPL36A-HNRNPH2H7BZ11 118 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 RRP8O43159 456 aaKnown RBP3.52□□□□□ -1.85
SMG1-204ENST00000561940 IL4P05112 153 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 CCDC172P0C7W6 258 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 GOLGA8HP0CJ92 632 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 CD9P21926 228 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 PRKACBP22694 351 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 MLF1P58340 268 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 RPL31P62899 125 aaKnown RBP3.52□□□□□ -1.85
SMG1-204ENST00000561940 ZNF616Q08AN1 781 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 IFFO1Q0D2I5 559 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 PRSS8Q16651 343 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 PDCL2Q8N4E4 241 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 OR9A2Q8NGT5 310 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 OR51A7Q8NH64 312 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 NDNFQ8TB73 568 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 ING5Q8WYH8 240 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 RNF157Q96PX1 679 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 C20orf144Q9BQM9 153 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 SULT4A1Q9BR01 284 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 CHCHD7Q9BUK0 85 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 S4R3C0 116 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 TRIP11Q15643 1979 aa3.52□□□□□ -1.85
SMG1-204ENST00000561940 K7EN84 100 aa3.51□□□□□ -1.85
SMG1-204ENST00000561940 CCDC22O60826 627 aa3.51□□□□□ -1.85
SMG1-204ENST00000561940 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
SMG1-204ENST00000561940 UPK1BO75841 260 aa3.51□□□□□ -1.85
SMG1-204ENST00000561940 RCBTB2O95199 551 aa3.51□□□□□ -1.85
SMG1-204ENST00000561940 CYB5R3P00387 301 aaPredicted RBP3.51□□□□□ -1.85
SMG1-204ENST00000561940 PAX6P26367 422 aa3.51□□□□□ -1.85
SMG1-204ENST00000561940 ELF3P78545 371 aaPredicted RBP3.51□□□□□ -1.85
SMG1-204ENST00000561940 DUPD1Q68J44 220 aa3.51□□□□□ -1.85
SMG1-204ENST00000561940 UNQ9165/PRO28630Q6UXU0 137 aa3.51□□□□□ -1.85
SMG1-204ENST00000561940 HMGN2P46Q86SG4 172 aa3.51□□□□□ -1.85
SMG1-204ENST00000561940 Q96MT0 163 aa3.51□□□□□ -1.85
SMG1-204ENST00000561940 ALS2CR12Q96Q35 445 aa3.51□□□□□ -1.85
SMG1-204ENST00000561940 NAPGQ99747 312 aaPredicted RBP3.51□□□□□ -1.85
SMG1-204ENST00000561940 ZNF2Q9BSG1 426 aaPredicted RBP3.51□□□□□ -1.85
SMG1-204ENST00000561940 MARVELD1Q9BSK0 173 aa3.51□□□□□ -1.85
SMG1-204ENST00000561940 IGHV2OR16-5A0A0B4J2B6 119 aa3.5□□□□□ -1.85
SMG1-204ENST00000561940 TVP23AA6NH52 213 aa3.5□□□□□ -1.85
SMG1-204ENST00000561940 A8MUU9 505 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms