RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 LHFPL4Q7Z7J7 247 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 LHFPL3Q86UP9 236 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 Q8IYB0 196 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 ENTHD1Q8IYW4 607 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 FAM58AQ8N1B3 248 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 DYNAPQ8N1N2 210 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 OR52N4Q8NGI2 321 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 OR10AC1Q8NH08 325 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 RHOXF1Q8NHV9 184 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 EMG1Q92979 244 aaKnown RBP8.34□□□□□ -1.07
CLK3-205ENST00000561673 C4orf36Q96KX1 117 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 SLC29A1Q99808 456 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 CHST6Q9GZX3 395 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 SEBOXQ9HB31 216 aaPredicted RBP8.34□□□□□ -1.07
CLK3-205ENST00000561673 FBLN5Q9UBX5 448 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 SIGLEC9Q9Y336 463 aa8.34□□□□□ -1.07
CLK3-205ENST00000561673 TRBV2A0A0J9YWF9 115 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 MEGF11A6BM72 1044 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 OR4C45A6NMZ5 311 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 ODF3BA8MYP8 253 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 CYB5AP00167 134 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 RBP4P02753 201 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 ARG1P05089 322 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 IGHV1-8P0DP01 117 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 DBTP11182 482 aaKnown RBP8.33□□□□□ -1.08
CLK3-205ENST00000561673 PRKACAP17612 351 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 GABRR1P24046 479 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 GABRA5P31644 462 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 RAB13P51153 203 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 ACTA2P62736 377 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 ACTG2P63267 376 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 DEFA6Q01524 100 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 ZNF91Q05481 1191 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 MEF2CQ06413 473 aaPredicted RBP8.33□□□□□ -1.08
CLK3-205ENST00000561673 ALKBH1Q13686 389 aaKnown RBP8.33□□□□□ -1.08
CLK3-205ENST00000561673 EDDM3AQ14507 147 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 GRK1Q15835 563 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 LDLRAD2Q5SZI1 272 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 LHFPL2Q6ZUX7 228 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 C10orf67Q8IYJ2 551 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 ZNF676Q8N7Q3 588 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 TPRX1Q8N7U7 411 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 OR11H6Q8NGC7 330 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 OR13C3Q8NGS6 347 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 OR13D1Q8NGV5 346 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 RFT1Q96AA3 541 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 SPSB1Q96BD6 273 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 ZNF714Q96N38 554 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 OPALINQ96PE5 141 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 SPACA5Q96QH8 159 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 ZNF649Q9BS31 505 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 C9orf16Q9BUW7 83 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 ALG8Q9BVK2 526 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 MMP27Q9H306 513 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 ISG20L2Q9H9L3 353 aaKnown RBP8.33□□□□□ -1.08
CLK3-205ENST00000561673 S100A14Q9HCY8 104 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 AMBNQ9NP70 447 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 HHLA2Q9UM44 414 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 MYRFQ9Y2G1 1151 aa8.33□□□□□ -1.08
CLK3-205ENST00000561673 PRKDCP78527 4128 aaKnown RBP8.33□□□□□ -1.08
CLK3-205ENST00000561673 IGKV1-12A0A0C4DH73 117 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 LOC100130705A0A1B0GUX0 176 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 hADV38S2A0JD32 116 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 VGLL3A8MV65 326 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 CHST1O43916 411 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 MPZL2O60487 215 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 IGKV1D-12P01611 117 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 MT-ND2P03891 347 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 OCM2P0CE71 109 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 OCMP0CE72 109 aaPredicted RBP8.32□□□□□ -1.08
CLK3-205ENST00000561673 PEX2P28328 305 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 KIR2DS4P43632 304 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 SNU13P55769 128 aaKnown RBP8.32□□□□□ -1.08
CLK3-205ENST00000561673 SSX2Q16385 188 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 PLA1AQ53H76 456 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 ZNF626Q68DY1 528 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 ZBTB49Q6ZSB9 765 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 OR4S1Q8NGB4 309 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 MALSU1Q96EH3 234 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 MRPL48Q96GC5 212 aaKnown RBP8.32□□□□□ -1.08
CLK3-205ENST00000561673 Q96MT0 163 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 ZCCHC4Q9H5U6 513 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 HMG20AQ9NP66 347 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 RAB18Q9NP72 206 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 FAM118AQ9NWS6 357 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 GLS2Q9UI32 602 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 GSTK1Q9Y2Q3 226 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 LINC00312Q9Y6C7 94 aa8.32□□□□□ -1.08
CLK3-205ENST00000561673 E9PI62 339 aa8.31□□□□□ -1.08
CLK3-205ENST00000561673 SIRPB1O00241 398 aa8.31□□□□□ -1.08
CLK3-205ENST00000561673 SH2D1BO14796 132 aa8.31□□□□□ -1.08
CLK3-205ENST00000561673 MGST3O14880 152 aa8.31□□□□□ -1.08
CLK3-205ENST00000561673 KDM4BO94953 1096 aa8.31□□□□□ -1.08
CLK3-205ENST00000561673 ZFPL1O95159 310 aa8.31□□□□□ -1.08
CLK3-205ENST00000561673 FADS2O95864 444 aaKnown RBP8.31□□□□□ -1.08
CLK3-205ENST00000561673 OR2H2O95918 312 aa8.31□□□□□ -1.08
CLK3-205ENST00000561673 ERP29P30040 261 aaKnown RBP8.31□□□□□ -1.08
CLK3-205ENST00000561673 OR3A1P47881 315 aa8.31□□□□□ -1.08
CLK3-205ENST00000561673 EFNB2P52799 333 aa8.31□□□□□ -1.08
CLK3-205ENST00000561673 RAB40BQ12829 278 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms