RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 RAB36O95755 333 aa10.06□□□□□ -0.8
HERC1-214ENST00000561400 IFNA17P01571 189 aa10.06□□□□□ -0.8
HERC1-214ENST00000561400 C21orf33P30042 268 aaPredicted RBP10.06□□□□□ -0.8
HERC1-214ENST00000561400 S100A7P31151 101 aa10.06□□□□□ -0.8
HERC1-214ENST00000561400 RORCP51449 518 aa10.06□□□□□ -0.8
HERC1-214ENST00000561400 MECP2P51608 486 aaKnown RBP10.06□□□□□ -0.8
HERC1-214ENST00000561400 CEBPGP53567 150 aa10.06□□□□□ -0.8
HERC1-214ENST00000561400 BTG1P62324 171 aa10.06□□□□□ -0.8
HERC1-214ENST00000561400 TLE4Q04727 773 aa10.06□□□□□ -0.8
HERC1-214ENST00000561400 SCGB2B2Q4G0G5 96 aa10.06□□□□□ -0.8
HERC1-214ENST00000561400 ELFN2Q5R3F8 820 aa10.06□□□□□ -0.8
HERC1-214ENST00000561400 UBAC2Q8NBM4 344 aa10.06□□□□□ -0.8
HERC1-214ENST00000561400 RNF133Q8WVZ7 376 aa10.06□□□□□ -0.8
HERC1-214ENST00000561400 CPNE2Q96FN4 548 aaPredicted RBP10.06□□□□□ -0.8
HERC1-214ENST00000561400 ZNF479Q96JC4 524 aa10.06□□□□□ -0.8
HERC1-214ENST00000561400 ZNF48Q96MX3 618 aaPredicted RBP10.06□□□□□ -0.8
HERC1-214ENST00000561400 SNHG12Q9BXW3 62 aa10.06□□□□□ -0.8
HERC1-214ENST00000561400 DUSP21Q9H596 190 aa10.06□□□□□ -0.8
HERC1-214ENST00000561400 CENPMQ9NSP4 180 aa10.06□□□□□ -0.8
HERC1-214ENST00000561400 SLCO1C1Q9NYB5 712 aa10.06□□□□□ -0.8
HERC1-214ENST00000561400 CRIM1Q9NZV1 1036 aa10.06□□□□□ -0.8
HERC1-214ENST00000561400 ZNF222Q9UK12 451 aa10.06□□□□□ -0.8
HERC1-214ENST00000561400 TMEM14AQ9Y6G1 99 aa10.06□□□□□ -0.8
HERC1-214ENST00000561400 HRNRQ86YZ3 2850 aaPredicted RBP10.05□□□□□ -0.8
HERC1-214ENST00000561400 PLCE1Q9P212 2302 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 LOC100509620A0A075B734 347 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 OR6C6A6NF89 314 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 TRDCB7Z8K6 153 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 ZNF670-ZNF695F2Z2N8 137 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 TCF21O43680 179 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 CECR9P0C854 216 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 CCL2P13500 99 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 RCC1P18754 421 aaPredicted RBP10.05□□□□□ -0.8
HERC1-214ENST00000561400 AZGP1P25311 298 aaKnown RBP10.05□□□□□ -0.8
HERC1-214ENST00000561400 S100A2P29034 98 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 PMELP40967 661 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 PEA15Q15121 130 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 RAB35Q15286 201 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 RSU1Q15404 277 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 RNLSQ5VYX0 342 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 ZNF322Q6U7Q0 402 aaPredicted RBP10.05□□□□□ -0.8
HERC1-214ENST00000561400 LRRN1Q6UXK5 716 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 TMEM200AQ86VY9 491 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 FAM169BQ8N8A8 192 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 OR11H7Q8NGC8 314 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 RNF2Q99496 336 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 ABCB9Q9NP78 766 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 TPRKBQ9Y3C4 175 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 DAPL1A0PJW8 107 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 M0R1B8 84 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 RGS11O94810 467 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 SERPINA3P01011 423 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 DBHP09172 617 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 NBEAP1P0C6P0 100 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 LIMS3P0CW19 117 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 LIMS4P0CW20 117 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 STOMP27105 288 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 AP3S2P59780 193 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 PLP2Q04941 152 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 ZNF684Q5T5D7 378 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 LEMD1Q68G75 181 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 LRRC28Q86X40 367 aaPredicted RBP10.05□□□□□ -0.8
HERC1-214ENST00000561400 THNSL2Q86YJ6 484 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 OR1F12Q8NHA8 337 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 ZNF596Q8TC21 504 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 POM121L2Q96KW2 1035 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 SIGLEC11Q96RL6 698 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 ATF6BQ99941 703 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 GSKIPQ9P0R6 139 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 ZNF281Q9Y2X9 895 aa10.05□□□□□ -0.8
HERC1-214ENST00000561400 IQCMA0A1B0GVH7 501 aa10.04□□□□□ -0.8
HERC1-214ENST00000561400 DPRXA6NFQ7 191 aa10.04□□□□□ -0.8
HERC1-214ENST00000561400 ZNF878C9JN71 531 aa10.04□□□□□ -0.8
HERC1-214ENST00000561400 INMT-MINDY4F8WBC2 141 aa10.04□□□□□ -0.8
HERC1-214ENST00000561400 TEX46H3BTG2 121 aa10.04□□□□□ -0.8
HERC1-214ENST00000561400 M0R143 59 aa10.04□□□□□ -0.8
HERC1-214ENST00000561400 SIAH2O43255 324 aa10.04□□□□□ -0.8
HERC1-214ENST00000561400 EPXP11678 715 aa10.04□□□□□ -0.8
HERC1-214ENST00000561400 CRYGSP22914 178 aa10.04□□□□□ -0.8
HERC1-214ENST00000561400 GADD45AP24522 165 aa10.04□□□□□ -0.8
HERC1-214ENST00000561400 ROM1Q03395 351 aa10.04□□□□□ -0.8
HERC1-214ENST00000561400 SLC9A3R2Q15599 337 aa10.04□□□□□ -0.8
HERC1-214ENST00000561400 UQCC3Q6UW78 93 aa10.04□□□□□ -0.8
HERC1-214ENST00000561400 SSX8Q7RTT4 187 aa10.04□□□□□ -0.8
HERC1-214ENST00000561400 PAQR4Q8N4S7 273 aaPredicted RBP10.04□□□□□ -0.8
HERC1-214ENST00000561400 SLC30A7Q8NEW0 376 aa10.04□□□□□ -0.8
HERC1-214ENST00000561400 NPRL2Q8WTW4 380 aa10.04□□□□□ -0.8
HERC1-214ENST00000561400 OR8B4Q96RC9 309 aa10.04□□□□□ -0.8
HERC1-214ENST00000561400 PRRT1Q99946 306 aa10.04□□□□□ -0.8
HERC1-214ENST00000561400 PCGF1Q9BSM1 259 aa10.04□□□□□ -0.8
HERC1-214ENST00000561400 OPN4Q9UHM6 478 aa10.04□□□□□ -0.8
HERC1-214ENST00000561400 MRM2Q9UI43 246 aaKnown RBP10.04□□□□□ -0.8
HERC1-214ENST00000561400 FBXL3Q9UKT7 428 aa10.04□□□□□ -0.8
HERC1-214ENST00000561400 FAM240BA0A1B0GVZ2 78 aa10.03□□□□□ -0.8
HERC1-214ENST00000561400 IRGMA1A4Y4 181 aa10.03□□□□□ -0.8
HERC1-214ENST00000561400 CDC14BO60729 498 aa10.03□□□□□ -0.8
HERC1-214ENST00000561400 HLA-DQB1P01920 261 aa10.03□□□□□ -0.8
HERC1-214ENST00000561400 RPLP1P05386 114 aaKnown RBP10.03□□□□□ -0.8
HERC1-214ENST00000561400 CRYGCP07315 174 aa10.03□□□□□ -0.8
HERC1-214ENST00000561400 MELTFP08582 738 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms