RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 CMTM4Q8IZR5 234 aa16.4■□□□□ 0.22
TSPAN3-210ENST00000561277 OR4M1Q8NGD0 313 aa16.4■□□□□ 0.22
TSPAN3-210ENST00000561277 OR52N4Q8NGI2 321 aa16.4■□□□□ 0.22
TSPAN3-210ENST00000561277 CCDC90BQ9GZT6 254 aa16.4■□□□□ 0.22
TSPAN3-210ENST00000561277 FAM192AQ9GZU8 254 aa16.4■□□□□ 0.22
TSPAN3-210ENST00000561277 SIRT7Q9NRC8 400 aa16.4■□□□□ 0.22
TSPAN3-210ENST00000561277 C19orf12Q9NSK7 152 aa16.4■□□□□ 0.22
TSPAN3-210ENST00000561277 GSTK1Q9Y2Q3 226 aa16.4■□□□□ 0.22
TSPAN3-210ENST00000561277 COL6A5A8TX70 2615 aa16.4■□□□□ 0.22
TSPAN3-210ENST00000561277 TRBV23-1A0A0A0MS06 115 aa16.39■□□□□ 0.21
TSPAN3-210ENST00000561277 A0A0A6YYJ9 748 aa16.39■□□□□ 0.21
TSPAN3-210ENST00000561277 A0A1W2PPK0 400 aa16.39■□□□□ 0.21
TSPAN3-210ENST00000561277 RGS10O43665 173 aa16.39■□□□□ 0.21
TSPAN3-210ENST00000561277 KDM4BO94953 1096 aa16.39■□□□□ 0.21
TSPAN3-210ENST00000561277 CHRM2P08172 466 aa16.39■□□□□ 0.21
TSPAN3-210ENST00000561277 CRHBPP24387 322 aa16.39■□□□□ 0.21
TSPAN3-210ENST00000561277 DLX1P56177 255 aa16.39■□□□□ 0.21
TSPAN3-210ENST00000561277 HILS1P60008 231 aa16.39■□□□□ 0.21
TSPAN3-210ENST00000561277 PDCD1Q15116 288 aa16.39■□□□□ 0.21
TSPAN3-210ENST00000561277 KIR3DL3Q8N743 410 aa16.39■□□□□ 0.21
TSPAN3-210ENST00000561277 SIGLECL1Q8N7X8 197 aa16.39■□□□□ 0.21
TSPAN3-210ENST00000561277 CPNE2Q96FN4 548 aaPredicted RBP16.39■□□□□ 0.21
TSPAN3-210ENST00000561277 DUSP21Q9H596 190 aa16.39■□□□□ 0.21
TSPAN3-210ENST00000561277 HMG20AQ9NP66 347 aa16.39■□□□□ 0.21
TSPAN3-210ENST00000561277 LSM2Q9Y333 95 aaKnown RBP16.39■□□□□ 0.21
TSPAN3-210ENST00000561277 CENPVL3A0A0U1RRI6 287 aa16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 GABRPO00591 440 aa16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 RPL31P62899 125 aaKnown RBP16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 BDH1Q02338 343 aa16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 SPHARQ15513 63 aa16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 DDI2Q5TDH0 399 aa16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 RBMS3Q6XE24 437 aaKnown RBP16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 USP43Q70EL4 1123 aa16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 SAXO1Q8IYX7 474 aa16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 TNFAIP8L1Q8WVP5 186 aa16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 FAM234AQ9H0X4 552 aa16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 TMEM138Q9NPI0 162 aa16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 CKLFQ9UBR5 152 aa16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 K7N7A8 449 aa16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 ZNF737O75373 536 aa16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 GABRR1P24046 479 aa16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 BDKRB2P30411 391 aa16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 IRF3Q14653 427 aa16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 ZNF146Q15072 292 aa16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 SPIN3Q5JUX0 258 aa16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 Q8N7P7 452 aa16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 ZSCAN4Q8NAM6 433 aaPredicted RBP16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 DMRTB1Q96MA1 342 aa16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 ZNF48Q96MX3 618 aaPredicted RBP16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 ZNF184Q99676 751 aaPredicted RBP16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 CHST6Q9GZX3 395 aa16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 ESM1Q9NQ30 184 aa16.38■□□□□ 0.21
TSPAN3-210ENST00000561277 TRAV8-7A0A075B6U6 113 aa16.37■□□□□ 0.21
TSPAN3-210ENST00000561277 MDFIC2A0A1B0GVS7 189 aa16.37■□□□□ 0.21
TSPAN3-210ENST00000561277 CD1AP06126 327 aa16.37■□□□□ 0.21
TSPAN3-210ENST00000561277 EEF1B2P24534 225 aaKnown RBP16.37■□□□□ 0.21
TSPAN3-210ENST00000561277 OR3A4PP47883 348 aa16.37■□□□□ 0.21
TSPAN3-210ENST00000561277 EDDM3BP56851 147 aa16.37■□□□□ 0.21
TSPAN3-210ENST00000561277 ACSM1Q08AH1 577 aa16.37■□□□□ 0.21
TSPAN3-210ENST00000561277 EDDM3AQ14507 147 aa16.37■□□□□ 0.21
TSPAN3-210ENST00000561277 C9orf139Q6ZV77 190 aa16.37■□□□□ 0.21
TSPAN3-210ENST00000561277 GDPD3Q7L5L3 318 aa16.37■□□□□ 0.21
TSPAN3-210ENST00000561277 PHC2Q8IXK0 858 aa16.37■□□□□ 0.21
TSPAN3-210ENST00000561277 JMJD8Q96S16 334 aa16.37■□□□□ 0.21
TSPAN3-210ENST00000561277 EXOSC4Q9NPD3 245 aaKnown RBP16.37■□□□□ 0.21
TSPAN3-210ENST00000561277 GLS2Q9UI32 602 aa16.37■□□□□ 0.21
TSPAN3-210ENST00000561277 IGHV1-69DA0A0B4J2H0 117 aa16.36■□□□□ 0.21
TSPAN3-210ENST00000561277 TMEM82A0PJX8 343 aa16.36■□□□□ 0.21
TSPAN3-210ENST00000561277 MEX3AA1L020 520 aaKnown RBP16.36■□□□□ 0.21
TSPAN3-210ENST00000561277 MAGEA13PA6NCF6 341 aa16.36■□□□□ 0.21
TSPAN3-210ENST00000561277 SIRPB1O00241 398 aa16.36■□□□□ 0.21
TSPAN3-210ENST00000561277 IGHV1-69P01742 117 aa16.36■□□□□ 0.21
TSPAN3-210ENST00000561277 HSMCR30P0CW71 290 aa16.36■□□□□ 0.21
TSPAN3-210ENST00000561277 IGFBP3P17936 291 aaPredicted RBP16.36■□□□□ 0.21
TSPAN3-210ENST00000561277 ZNF93P35789 620 aaPredicted RBP16.36■□□□□ 0.21
TSPAN3-210ENST00000561277 KLRD1Q13241 179 aa16.36■□□□□ 0.21
TSPAN3-210ENST00000561277 RBM48Q5RL73 367 aaKnown RBP16.36■□□□□ 0.21
TSPAN3-210ENST00000561277 C17orf107Q6ZR85 190 aa16.36■□□□□ 0.21
TSPAN3-210ENST00000561277 OR8H2Q8N162 312 aa16.36■□□□□ 0.21
TSPAN3-210ENST00000561277 SNX22Q96L94 193 aa16.36■□□□□ 0.21
TSPAN3-210ENST00000561277 DUX5Q96PT3 197 aa16.36■□□□□ 0.21
TSPAN3-210ENST00000561277 DERL3Q96Q80 235 aa16.36■□□□□ 0.21
TSPAN3-210ENST00000561277 TMED9Q9BVK6 235 aa16.36■□□□□ 0.21
TSPAN3-210ENST00000561277 C19orf24Q9BVV8 132 aa16.36■□□□□ 0.21
TSPAN3-210ENST00000561277 DNHD1Q96M86 4753 aa16.35■□□□□ 0.21
TSPAN3-210ENST00000561277 TRBV5-7A0A0A0MS05 114 aa16.35■□□□□ 0.21
TSPAN3-210ENST00000561277 M0R1W7 72 aa16.35■□□□□ 0.21
TSPAN3-210ENST00000561277 PSPNO60542 156 aa16.35■□□□□ 0.21
TSPAN3-210ENST00000561277 ALDOBP05062 364 aa16.35■□□□□ 0.21
TSPAN3-210ENST00000561277 FSTP19883 344 aa16.35■□□□□ 0.21
TSPAN3-210ENST00000561277 SCN1BQ07699 218 aa16.35■□□□□ 0.21
TSPAN3-210ENST00000561277 BLMHQ13867 455 aa16.35■□□□□ 0.21
TSPAN3-210ENST00000561277 INSL4Q14641 139 aa16.35■□□□□ 0.21
TSPAN3-210ENST00000561277 GRK1Q15835 563 aa16.35■□□□□ 0.21
TSPAN3-210ENST00000561277 TMEM200BQ69YZ2 307 aa16.35■□□□□ 0.21
TSPAN3-210ENST00000561277 OR10K1Q8NGX5 313 aa16.35■□□□□ 0.21
TSPAN3-210ENST00000561277 Q9H521 79 aa16.35■□□□□ 0.21
TSPAN3-210ENST00000561277 METTL8Q9H825 291 aaKnown RBP16.35■□□□□ 0.21
TSPAN3-210ENST00000561277 RHOFQ9HBH0 211 aa16.35■□□□□ 0.21
TSPAN3-210ENST00000561277 BLOC1S6Q9UL45 172 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 160.3 ms