RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 RBFOX1Q9NWB1 397 aaKnown RBP8.94□□□□□ -0.98
TPM1-229ENST00000561242 ING3Q9NXR8 418 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 MTCH1Q9NZJ7 389 aa8.94□□□□□ -0.98
TPM1-229ENST00000561242 AK6Q9Y3D8 172 aaKnown RBP8.94□□□□□ -0.98
TPM1-229ENST00000561242 MGST3O14880 152 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 TK1P04183 234 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 IGFBP3P17936 291 aaPredicted RBP8.93□□□□□ -0.98
TPM1-229ENST00000561242 DUSP1P28562 367 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 IL2RGP31785 369 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 OR3A4PP47883 348 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 LGALS4P56470 323 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 CAV3P56539 151 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 FABP5Q01469 135 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 GUCA2AQ02747 115 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 IL13RA2Q14627 380 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 PDCD1Q15116 288 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 SYT6Q5T7P8 510 aaPredicted RBP8.93□□□□□ -0.98
TPM1-229ENST00000561242 ZNF788Q6ZQV5 615 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 FAM216BQ8N7L0 139 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 ZNRF1Q8ND25 227 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 OR10K1Q8NGX5 313 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 ANGPTL6Q8NI99 470 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 RGP1Q92546 391 aaPredicted RBP8.93□□□□□ -0.98
TPM1-229ENST00000561242 RNF166Q96A37 237 aaPredicted RBP8.93□□□□□ -0.98
TPM1-229ENST00000561242 SDSLQ96GA7 329 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 DMRTB1Q96MA1 342 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 SMR3AQ99954 134 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 PCGF1Q9BSM1 259 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 SELENOIQ9C0D9 397 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 HEXA-AS1Q9H8Q6 139 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 CHMP1AQ9HD42 196 aaPredicted RBP8.93□□□□□ -0.98
TPM1-229ENST00000561242 TMEM160Q9NX00 188 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 KCNIP1Q9NZI2 227 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 FAM96BQ9Y3D0 163 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 USF3Q68DE3 2245 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 NOTCH2Q04721 2471 aa8.93□□□□□ -0.98
TPM1-229ENST00000561242 IGKV1-27A0A075B6S5 117 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 TRAV8-7A0A075B6U6 113 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 TRAV1-2A0A0B4J238 106 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 IGHV2-70DA0A0C4DH43 119 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 KIR2DS1A0A191URI9 304 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 CCDC160A6NGH7 325 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 F5H0A9 414 aaPredicted RBP8.92□□□□□ -0.98
TPM1-229ENST00000561242 MPIG6BO95866 241 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 GADD45AP24522 165 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 NPBWR2P48146 333 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 KCNJ3P48549 501 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 RPS11P62280 158 aaKnown RBP eCLIP8.92□□□□□ -0.98
TPM1-229ENST00000561242 ARF6P62330 175 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 DGUOKQ16854 277 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 MPV17LQ2QL34 196 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 KRBOX4Q5JUW0 171 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 FAM120AOSQ5T036 256 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 NCR3LG1Q68D85 454 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 OR4D6Q8NGJ1 314 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 ZNF418Q8TF45 676 aaPredicted RBP8.92□□□□□ -0.98
TPM1-229ENST00000561242 ZDHHC16Q969W1 377 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 ORAI1Q96D31 301 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 SEH1LQ96EE3 360 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 GAFA1Q96PS6 74 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 JMJD8Q96S16 334 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 TMEM59Q9BXS4 323 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 GAL3ST2Q9H3Q3 398 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 IL36GQ9NZH8 169 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 OR6C3Q9NZP0 311 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 NAV2Q8IVL1 2488 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 PRR14LQ5THK1 2151 aa8.92□□□□□ -0.98
TPM1-229ENST00000561242 ROS1P08922 2347 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 BTBD17A6NE02 478 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 A8MXK9 166 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 INAFM1C9JVW0 142 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 K7N7A8 449 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 HSPB6O14558 160 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 SCGNO76038 276 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 OR2H2O95918 312 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 PAHP00439 452 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 MGMTP16455 207 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 TALDO1P37837 337 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 BPIFB3P59826 476 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 ERVK11-1P61568 191 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 MEF2CQ06413 473 aaPredicted RBP8.91□□□□□ -0.98
TPM1-229ENST00000561242 ARL6IP1Q15041 203 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 ZNF146Q15072 292 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 ELP2Q6IA86 826 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 OR52W1Q6IF63 320 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 OR8H2Q8N162 312 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 OR4M1Q8NGD0 313 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 POM121Q96HA1 1249 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 C1orf159Q96HA4 380 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 FGF23Q9GZV9 251 aaPredicted RBP8.91□□□□□ -0.98
TPM1-229ENST00000561242 SEBOXQ9HB31 216 aaPredicted RBP8.91□□□□□ -0.98
TPM1-229ENST00000561242 HES4Q9HCC6 221 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 PLEKHJ1Q9NW61 149 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 TXNL4BQ9NX01 149 aaKnown RBP8.91□□□□□ -0.98
TPM1-229ENST00000561242 STEAP1Q9UHE8 339 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 RPUSD1Q9UJJ7 312 aaKnown RBP8.91□□□□□ -0.98
TPM1-229ENST00000561242 RAB22AQ9UL26 194 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 SF3B6Q9Y3B4 125 aaKnown RBP8.91□□□□□ -0.98
TPM1-229ENST00000561242 INSIG2Q9Y5U4 225 aa8.91□□□□□ -0.98
TPM1-229ENST00000561242 KPTNQ9Y664 436 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms