RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 UTS2BQ765I0 119 aa6.63□□□□□ -1.35
LRRC28-219ENST00000560483 GDPD3Q7L5L3 318 aa6.63□□□□□ -1.35
LRRC28-219ENST00000560483 Q8IYB0 196 aa6.63□□□□□ -1.35
LRRC28-219ENST00000560483 FAM58AQ8N1B3 248 aa6.63□□□□□ -1.35
LRRC28-219ENST00000560483 OR4M1Q8NGD0 313 aa6.63□□□□□ -1.35
LRRC28-219ENST00000560483 OR13C5Q8NGS8 318 aa6.63□□□□□ -1.35
LRRC28-219ENST00000560483 ANGPTL6Q8NI99 470 aa6.63□□□□□ -1.35
LRRC28-219ENST00000560483 TNFAIP8L1Q8WVP5 186 aa6.63□□□□□ -1.35
LRRC28-219ENST00000560483 LHX4Q969G2 390 aa6.63□□□□□ -1.35
LRRC28-219ENST00000560483 GAFA1Q96PS6 74 aa6.63□□□□□ -1.35
LRRC28-219ENST00000560483 SLC6A7Q99884 636 aa6.63□□□□□ -1.35
LRRC28-219ENST00000560483 TMED9Q9BVK6 235 aa6.63□□□□□ -1.35
LRRC28-219ENST00000560483 SUCNR1Q9BXA5 334 aa6.63□□□□□ -1.35
LRRC28-219ENST00000560483 ANKRD60Q9BZ19 345 aa6.63□□□□□ -1.35
LRRC28-219ENST00000560483 DNTTIP1Q9H147 329 aa6.63□□□□□ -1.35
LRRC28-219ENST00000560483 CNTD2Q9H8S5 307 aa6.63□□□□□ -1.35
LRRC28-219ENST00000560483 TNFRSF19Q9NS68 423 aa6.63□□□□□ -1.35
LRRC28-219ENST00000560483 PLCXD1Q9NUJ7 323 aa6.63□□□□□ -1.35
LRRC28-219ENST00000560483 RBFOX1Q9NWB1 397 aaKnown RBP6.63□□□□□ -1.35
LRRC28-219ENST00000560483 NUP50Q9UKX7 468 aa6.63□□□□□ -1.35
LRRC28-219ENST00000560483 RAB26Q9ULW5 256 aa6.63□□□□□ -1.35
LRRC28-219ENST00000560483 ING4Q9UNL4 249 aa6.63□□□□□ -1.35
LRRC28-219ENST00000560483 GSTK1Q9Y2Q3 226 aa6.63□□□□□ -1.35
LRRC28-219ENST00000560483 NF1P21359 2839 aa6.63□□□□□ -1.35
LRRC28-219ENST00000560483 IGKV1D-17A0A075B6S4 117 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 IGKV1-27A0A075B6S5 117 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 IGKV1-9A0A0C4DH69 117 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 KIR2DS1A0A191URI9 304 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 A0A1W2PRD5 423 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 A0A1W2PRF3 423 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 A0A1W2PRM7 423 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 ZNF879B4DU55 563 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.62□□□□□ -1.35
LRRC28-219ENST00000560483 SIRPB1O00241 398 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 SIGLEC5O15389 551 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 HAND1O96004 215 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 CSTBP04080 98 aaKnown RBP6.62□□□□□ -1.35
LRRC28-219ENST00000560483 MAS1P04201 325 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 ZNF44P15621 663 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 MAPK3P27361 379 aaPredicted RBP6.62□□□□□ -1.35
LRRC28-219ENST00000560483 COL10A1Q03692 680 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 PAX8Q06710 450 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 PDZK1IP1Q13113 114 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 RIPK1Q13546 671 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 KISS1Q15726 138 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 Q499Y3 187 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 YIF1BQ5BJH7 314 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 DDI2Q5TDH0 399 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 ZNF841Q6ZN19 808 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 ZNF788Q6ZQV5 615 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 TRAPPC6BQ86SZ2 158 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 ZNF561Q8N587 486 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 JAGN1Q8N5M9 183 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 NANOGP1Q8N7R0 232 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 DNAAF1Q8NEP3 725 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 PPP1R35Q8TAP8 253 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 TMEM158Q8WZ71 300 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 UFD1Q92890 307 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 ORAI1Q96D31 301 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 OR14A2Q96R54 314 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 JMJD8Q96S16 334 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 ZNF184Q99676 751 aaPredicted RBP6.62□□□□□ -1.35
LRRC28-219ENST00000560483 NRIP2Q9BQI9 281 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 ZNF649Q9BS31 505 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 CHST6Q9GZX3 395 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 EXOSC4Q9NPD3 245 aaKnown RBP6.62□□□□□ -1.35
LRRC28-219ENST00000560483 SIRT7Q9NRC8 400 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 MTCH1Q9NZJ7 389 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 KAAG1Q9UBP8 84 aa6.62□□□□□ -1.35
LRRC28-219ENST00000560483 RPUSD1Q9UJJ7 312 aaKnown RBP6.62□□□□□ -1.35
LRRC28-219ENST00000560483 SIRT4Q9Y6E7 314 aaPredicted RBP6.62□□□□□ -1.35
LRRC28-219ENST00000560483 hCG_1809904A0A1W2PP81 198 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 A0A1W2PPE2 198 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 A0A1W2PR64 198 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 A0A1W2PRV1 198 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 MEX3AA1L020 520 aaKnown RBP6.61□□□□□ -1.35
LRRC28-219ENST00000560483 HSPB6O14558 160 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 SH2D1BO14796 132 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 OGG1O15527 345 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 HTR3BO95264 441 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 LALBAP00709 142 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 KNG1P01042 644 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 MT-ND2P03891 347 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 SFTPBP07988 381 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 CHRM2P08172 466 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 IGHV4-38-2P0DP08 117 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 RAB6AP20340 208 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 MPZP25189 248 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 BDKRB2P30411 391 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 ZNF93P35789 620 aaPredicted RBP6.61□□□□□ -1.35
LRRC28-219ENST00000560483 NPBWR2P48146 333 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 RPL31P62899 125 aaKnown RBP6.61□□□□□ -1.35
LRRC28-219ENST00000560483 ACTG1P63261 375 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 PRB3Q04118 309 aaPredicted RBP6.61□□□□□ -1.35
LRRC28-219ENST00000560483 BAMBIQ13145 260 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 SPHARQ15513 63 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 GRK1Q15835 563 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 LIPKQ5VXJ0 399 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 RUSC1-AS1Q66K80 236 aa6.61□□□□□ -1.35
LRRC28-219ENST00000560483 LAIR2Q6ISS4 152 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms