RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 OR1K1Q8NGR3 316 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 BCL2L2Q92843 193 aaPredicted RBP8.37□□□□□ -1.07
RTF1-206ENST00000560447 MOB3AQ96BX8 217 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 WDYHV1Q96HA8 205 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 GMPPAQ96IJ6 420 aaPredicted RBP8.37□□□□□ -1.07
RTF1-206ENST00000560447 SEC22AQ96IW7 307 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 HIST1H2AAQ96QV6 131 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 ZNF2Q9BSG1 426 aaPredicted RBP8.37□□□□□ -1.07
RTF1-206ENST00000560447 FAAP24Q9BTP7 215 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 HES7Q9BYE0 225 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 PKIBQ9C010 78 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 SHARPINQ9H0F6 387 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 SDHAF2Q9NX18 166 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 PLA2G3Q9NZ20 509 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 RCC2Q9P258 522 aaKnown RBP8.37□□□□□ -1.07
RTF1-206ENST00000560447 MBD2Q9UBB5 411 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 R4GN57 208 aa8.37□□□□□ -1.07
RTF1-206ENST00000560447 WDR87Q6ZQQ6 2873 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 TRBV6-6A0A0A6YYG2 114 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 C5orf49A4QMS7 147 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 SLC22A20A6NK97 555 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 ZNF850A8MQ14 1090 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 GEMIN2O14893 280 aaKnown RBP8.36□□□□□ -1.07
RTF1-206ENST00000560447 F10P00742 488 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 RLN2P04090 185 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 ZNF728P0DKX0 622 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 TUBG1P23258 451 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 GLRA1P23415 457 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 PTGER4P35408 488 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 ARG2P78540 354 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 TGFBR3Q03167 851 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 CLN3Q13286 438 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 MRPL49Q13405 166 aaKnown RBP8.36□□□□□ -1.07
RTF1-206ENST00000560447 SNTB1Q13884 538 aaKnown RBP8.36□□□□□ -1.07
RTF1-206ENST00000560447 ANKRD55Q3KP44 614 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 EIF5AL1Q6IS14 154 aaKnown RBP8.36□□□□□ -1.07
RTF1-206ENST00000560447 UQCC3Q6UW78 93 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 TFAP2EQ6VUC0 442 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 ZNF573Q86YE8 665 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 STPG2Q8N412 459 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 SUMF1Q8NBK3 374 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 SLC30A7Q8NEW0 376 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 OR56B2PQ8NGI1 322 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 OR1S1Q8NH92 325 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 DCUN1D4Q92564 292 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 SULT4A1Q9BR01 284 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 PAPOLGQ9BWT3 736 aaKnown RBP8.36□□□□□ -1.07
RTF1-206ENST00000560447 ZNF471Q9BX82 626 aaPredicted RBP8.36□□□□□ -1.07
RTF1-206ENST00000560447 LDAHQ9H6V9 325 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 IFT22Q9H7X7 185 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 METTL8Q9H825 291 aaKnown RBP8.36□□□□□ -1.07
RTF1-206ENST00000560447 TUBG2Q9NRH3 451 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 TUBD1Q9UJT1 453 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 STARD10Q9Y365 291 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 CSAG2Q9Y5P2 127 aa8.36□□□□□ -1.07
RTF1-206ENST00000560447 KIR2DS1A0A191URI9 304 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 C13orf42A0A1B0GVH6 325 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 DUXBA0A1W2PPF3 345 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 RAB19A4D1S5 217 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 ANKRD30BLA7E2S9 258 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 B8ZZF3 427 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 F5H0A9 414 aaPredicted RBP8.35□□□□□ -1.07
RTF1-206ENST00000560447 TRAPPC2LH3BP13 241 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 SDCBPO00560 298 aaPredicted RBP8.35□□□□□ -1.07
RTF1-206ENST00000560447 SPDEFO95238 335 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 SFTPBP07988 381 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 KIR2DS4P43632 304 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 TNFSF10P50591 281 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 RND3P61587 244 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 GNG3P63215 75 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 SMCO1Q147U7 214 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 KIR2DS1Q14954 304 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 SLC9A3R2Q15599 337 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 ABCA11PQ4W5N1 156 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 SLC25A26Q70HW3 274 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.35□□□□□ -1.07
RTF1-206ENST00000560447 Q8IYB0 196 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 BVESQ8NE79 360 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 C1orf162Q8NEQ5 155 aaPredicted RBP8.35□□□□□ -1.07
RTF1-206ENST00000560447 RSRP1Q9BUV0 290 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 RNF126Q9BV68 326 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 ZNF552Q9H707 407 aaPredicted RBP8.35□□□□□ -1.07
RTF1-206ENST00000560447 NAA60Q9H7X0 242 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 PLEKHA2Q9HB19 425 aa8.35□□□□□ -1.07
RTF1-206ENST00000560447 FBXO9Q9UK97 447 aaPredicted RBP8.35□□□□□ -1.07
RTF1-206ENST00000560447 IGKV1D-8A0A087WSZ0 117 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 TRAV17A0A0B4J275 112 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 ARGFXA6NJG6 315 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 CD300LBA8K4G0 201 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 TEX46H3BTG2 121 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 H7C1Q1 480 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 AQP7O14520 342 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 FGF16O43320 207 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 DIRAS3O95661 229 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 NAPSAO96009 420 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 HLA-HP01893 362 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 GAPDHP04406 335 aaKnown RBP8.34□□□□□ -1.07
RTF1-206ENST00000560447 ACAA1P09110 424 aaPredicted RBP8.34□□□□□ -1.07
RTF1-206ENST00000560447 WNT2P09544 360 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 CD79AP11912 226 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms