RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 CHIAQ9BZP6 476 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 BCL2L14Q9BZR8 327 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 WDR13Q9H1Z4 485 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 IL36GQ9NZH8 169 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 SCP2D1Q9UJQ7 156 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 CACNA1DQ01668 2161 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 KIAA2026Q5HYC2 2103 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 TMEM82A0PJX8 343 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 OR5B21A6NL26 309 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 DISC1C4P0D8 188 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 C16orf97H3BN30 126 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 WNT9BO14905 357 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 SIX6O95475 246 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 FGF12P61328 243 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 MRPS15P82914 257 aaKnown RBP9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 CDSNQ15517 529 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 C2orf68Q2NKX9 166 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 ATPAF1Q5TC12 328 aaPredicted RBP9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 SEZ6L2Q6UXD5 910 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 HOGA1Q86XE5 327 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 ZSCAN4Q8NAM6 433 aaPredicted RBP9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 ADAD2Q8NCV1 583 aaKnown RBP9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 NEK7Q8TDX7 302 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 RTL8AQ9BWD3 113 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 CA10Q9NS85 328 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 EHFQ9NZC4 300 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 TUBD1Q9UJT1 453 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 A6NLC8 198 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 FAM90A27PA6NNH2 459 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 PDCD6O75340 191 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 GRNP28799 593 aaKnown RBP9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 OR3A3P47888 321 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 CHRFAM7AQ494W8 412 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 ZFP69Q49AA0 526 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 SLC36A1Q7Z2H8 476 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 MUC20Q8N307 709 aaPredicted RBP9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 OR2Z1Q8NG97 314 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 OR5H2Q8NGV7 314 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 TREM2Q9NZC2 230 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 MEMO1Q9Y316 297 aa9.24□□□□□ -0.93
SNRPA1-211ENST00000560433 TRAV39A0A0B4J263 110 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 MEX3AA1L020 520 aaKnown RBP9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 NKX2-6A6NCS4 301 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 J3QW42 95 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 CCL21O00585 134 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 FCGR3AP08637 254 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 AKR1C4P17516 323 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 FUT3P21217 361 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 LIN54Q6MZP7 749 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 FAM58AQ8N1B3 248 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 PRR13Q9NZ81 148 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 OR14J1Q9UGF5 321 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 A0A1B0GUH1 482 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 ABCD4O14678 606 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 FABP7O15540 132 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 THBDP07204 575 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 OR4E1P0C645 316 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 ZNF44P15621 663 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 CD40P25942 277 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 ARPC4P59998 168 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 IL24Q13007 206 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 MEF2DQ14814 521 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 KCNJ8Q15842 424 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 FAM76BQ5HYJ3 339 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 METTL11BQ5VVY1 283 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 OR5AP2Q8NGF4 316 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 OR13G1Q8NGZ3 307 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 MRPS24Q96EL2 167 aaKnown RBP9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 WFIKKN1Q96NZ8 548 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 DMRTA2Q96SC8 542 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 PIGMQ9H3S5 423 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 LIME1Q9H400 295 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 PRORYQ9H606 182 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 CHMP1AQ9HD42 196 aaPredicted RBP9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 PLSCR3Q9NRY6 295 aa9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 RALYQ9UKM9 306 aaKnown RBP9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 SPTBN1Q01082 2364 aaKnown RBP9.23□□□□□ -0.93
SNRPA1-211ENST00000560433 DCHS2Q6V1P9 2916 aa9.22□□□□□ -0.93
SNRPA1-211ENST00000560433 hCG_1807616A0A1W2PRN6 198 aa9.22□□□□□ -0.93
SNRPA1-211ENST00000560433 J3QT63 122 aa9.22□□□□□ -0.93
SNRPA1-211ENST00000560433 SIRPB1O00241 398 aa9.22□□□□□ -0.93
SNRPA1-211ENST00000560433 SPRY3O43610 288 aa9.22□□□□□ -0.93
SNRPA1-211ENST00000560433 CREBL2O60519 120 aaPredicted RBP9.22□□□□□ -0.93
SNRPA1-211ENST00000560433 NAT1P18440 290 aa9.22□□□□□ -0.93
SNRPA1-211ENST00000560433 RAG2P55895 527 aa9.22□□□□□ -0.93
SNRPA1-211ENST00000560433 Q5BKY6 102 aa9.22□□□□□ -0.93
SNRPA1-211ENST00000560433 ZNF626Q68DY1 528 aa9.22□□□□□ -0.93
SNRPA1-211ENST00000560433 SLC22A25Q6T423 547 aa9.22□□□□□ -0.93
SNRPA1-211ENST00000560433 C20orf204Q6ZNR8 217 aa9.22□□□□□ -0.93
SNRPA1-211ENST00000560433 TMEM200AQ86VY9 491 aa9.22□□□□□ -0.93
SNRPA1-211ENST00000560433 C11orf53Q8IXP5 236 aa9.22□□□□□ -0.93
SNRPA1-211ENST00000560433 ZCCHC24Q8N2G6 241 aaKnown RBP9.22□□□□□ -0.93
SNRPA1-211ENST00000560433 OR5T2Q8NGG2 359 aa9.22□□□□□ -0.93
SNRPA1-211ENST00000560433 PRRT1Q99946 306 aa9.22□□□□□ -0.93
SNRPA1-211ENST00000560433 VKORC1Q9BQB6 163 aa9.22□□□□□ -0.93
SNRPA1-211ENST00000560433 HSF4Q9ULV5 492 aa9.22□□□□□ -0.93
SNRPA1-211ENST00000560433 ANAPC10Q9UM13 185 aa9.22□□□□□ -0.93
SNRPA1-211ENST00000560433 LRP5LA4QPB2 252 aa9.22□□□□□ -0.93
SNRPA1-211ENST00000560433 DPRXA6NFQ7 191 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms