RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	PIK3IP1	Q96FE7	263 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	CNTNAP3B	Q96NU0	1288 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	IER2	Q9BTL4	223 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	ACKR4	Q9NPB9	350 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	ZMAT5	Q9UDW3	170 aa	Known RBP	4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	AK3	Q9UIJ7	227 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	OSGIN2	Q9Y236	505 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	CAD	P27708	2225 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	TRAV20	A0A0B4J274	112 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369		M0R296	226 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	TERT	O14746	1132 aa	Known RBP	4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	FGF16	O43320	207 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	NGF	P01138	241 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	APOC1	P02654	83 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	HOXB5	P09067	269 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	MUC1	P15941	1255 aa	Predicted RBP	4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	ITGA3	P26006	1051 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	GSK3A	P49840	483 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	LHX2	P50458	406 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	CLDN18	P56856	261 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	ARF1	P84077	181 aa	Known RBP	4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	HOXA4	Q00056	320 aa	Predicted RBP	4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	SRSF4	Q08170	494 aa	Known RBP	4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	AIMP2	Q13155	320 aa	Known RBP	4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	RAB35	Q15286	201 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	MST1L	Q2TV78	715 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	SP6	Q3SY56	376 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	RNFT1	Q5M7Z0	435 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	AVPI1	Q5T686	147 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	RPUSD3	Q6P087	351 aa	Known RBP	4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369		Q6ZSR3	168 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	LHFPL1	Q86WI0	220 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	PIGC	Q92535	297 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	SPTSSA	Q969W0	71 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	PHYHIPL	Q96FC7	376 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369		Q96M66	194 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	TAAR9	Q96RI9	348 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	ZNF703	Q9H7S9	590 aa	Predicted RBP	4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	CHMP1A	Q9HD42	196 aa	Predicted RBP	4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	CYTL1	Q9NRR1	136 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	ZFP57	Q9NU63	452 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	UQCC1	Q9NVA1	299 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	ZNF107	Q9UII5	783 aa	Predicted RBP	4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	GVINP1	Q7Z2Y8	2422 aa		4.99	□□□□□ -1.61
LRRC49-223	ENST00000560369	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	PIEZO2	Q9H5I5	2752 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	TRBV23-1	A0A0A0MS06	115 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	ARPC4-TTLL3	A0A0A6YYG9	625 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369		A0A1W2PPE3	182 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	ZNF850	A8MQ14	1090 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369		C9JQL5	133 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	CYTIP	O60759	359 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	DUS4L	O95620	317 aa	Known RBP	4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	SERPINA5	P05154	406 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	CST2	P09228	141 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	ZNF806	P0C7X5	589 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	CD79A	P11912	226 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	FKBP2	P26885	142 aa	Known RBP	4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	PSMB6	P28072	239 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	SPEM2	Q0P670	501 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	HABP2	Q14520	560 aa	Predicted RBP	4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	OR1C1	Q15619	314 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	KRTAP27-1	Q3LI81	207 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	FAM209B	Q5JX69	171 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	VAX1	Q5SQQ9	334 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	TMPRSS7	Q7RTY8	843 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	NUFIP2	Q7Z417	695 aa	Known RBP	4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	BAP18	Q8IXM2	172 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	FBXL14	Q8N1E6	418 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	OR10AD1	Q8NGE0	317 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	CPT1C	Q8TCG5	803 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	EMG1	Q92979	244 aa	Known RBP	4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	ARL11	Q969Q4	196 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	PHB2	Q99623	299 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	ZNF2	Q9BSG1	426 aa	Predicted RBP	4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	URM1	Q9BTM9	101 aa	Known RBP	4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	SF3B5	Q9BWJ5	86 aa	Known RBP	4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	TM2D1	Q9BX74	207 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	PARP12	Q9H0J9	701 aa	Known RBP	4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	PLEKHJ1	Q9NW61	149 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	DOCK11	Q5JSL3	2073 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	IGHV3-64D	A0A0J9YX35	117 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	hCG_38984	A0A1B0GV85	526 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369		A0A1W2PR80	420 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	PQLC2L	A1A4F0	135 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	SNAPIN	O95295	136 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	SFT2D2	O95562	160 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	NRAS	P01111	189 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	CRH	P06850	196 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	FAM157C	P0CG43	387 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	TPT1	P13693	172 aa	Known RBP	4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	HOXB1	P14653	301 aa	Predicted RBP	4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	HLA-G	P17693	338 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	RCC1	P18754	421 aa	Predicted RBP	4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	DUSP1	P28562	367 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	ALDH3B1	P43353	468 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	OR3A2	P47893	321 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	PMP22	Q01453	160 aa		4.98	□□□□□ -1.61
LRRC49-223	ENST00000560369	RSU1	Q15404	277 aa		4.98	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms