RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 DGUOKQ16854 277 aa10.04□□□□□ -0.8
RABGGTA-215ENST00000560207 MPV17LQ2QL34 196 aa10.04□□□□□ -0.8
RABGGTA-215ENST00000560207 DCAF12L2Q5VW00 463 aa10.04□□□□□ -0.8
RABGGTA-215ENST00000560207 CROCCP3Q8IVE0 287 aa10.04□□□□□ -0.8
RABGGTA-215ENST00000560207 RAB40AQ8WXH6 277 aa10.04□□□□□ -0.8
RABGGTA-215ENST00000560207 RFT1Q96AA3 541 aa10.04□□□□□ -0.8
RABGGTA-215ENST00000560207 SNX22Q96L94 193 aa10.04□□□□□ -0.8
RABGGTA-215ENST00000560207 KCTD7Q96MP8 289 aa10.04□□□□□ -0.8
RABGGTA-215ENST00000560207 MRI1Q9BV20 369 aa10.04□□□□□ -0.8
RABGGTA-215ENST00000560207 ELL3Q9HB65 397 aaPredicted RBP10.04□□□□□ -0.8
RABGGTA-215ENST00000560207 EXOSC4Q9NPD3 245 aaKnown RBP10.04□□□□□ -0.8
RABGGTA-215ENST00000560207 HIF1ANQ9NWT6 349 aa10.04□□□□□ -0.8
RABGGTA-215ENST00000560207 SLC25A10Q9UBX3 287 aaPredicted RBP10.04□□□□□ -0.8
RABGGTA-215ENST00000560207 ZNF222Q9UK12 451 aa10.04□□□□□ -0.8
RABGGTA-215ENST00000560207 MRPS28Q9Y2Q9 187 aaKnown RBP10.04□□□□□ -0.8
RABGGTA-215ENST00000560207 LOC105371242A0A075B767 164 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 IGHV3OR15-7A0A075B7D8 119 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 KIR2DS1A0A191URI9 304 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 hCG_1809904A0A1W2PP81 198 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 A0A1W2PPE2 198 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 A0A1W2PR64 198 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 A0A1W2PRV1 198 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 SLC17A2O00624 439 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 BCL3P20749 454 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 HTR2CP28335 458 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 IL2RGP31785 369 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 GP2P55259 537 aaKnown RBP10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 AWAT2Q6E213 333 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 CSPG4Q6UVK1 2322 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 ZNF841Q6ZN19 808 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 LRRTM1Q86UE6 522 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 LYPD6Q86Y78 171 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 CMTM4Q8IZR5 234 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 OSR2Q8N2R0 312 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 MAPK1IP1LQ8NDC0 245 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 OR5D18Q8NGL1 313 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 KCNG3Q8TAE7 436 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 C8orf46Q8TAG6 207 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 SPACA5Q96QH8 159 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 CCL13Q99616 98 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 IFT22Q9H7X7 185 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 CNTD2Q9H8S5 307 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 TXNL4BQ9NX01 149 aaKnown RBP10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 CDC42EP3Q9UKI2 254 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 ING4Q9UNL4 249 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 V9GY05 133 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 TLN2Q9Y4G6 2542 aa10.03□□□□□ -0.8
RABGGTA-215ENST00000560207 K7N7A8 449 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 SLC22A1O15245 554 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 ANGPTL7O43827 346 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 HTR3BO95264 441 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 HAND1O96004 215 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 TK1P04183 234 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 CSN2P05814 226 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 GLAP06280 429 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 SFTPBP07988 381 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 ZNF16P17020 682 aaPredicted RBP10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 RAB3BP20337 219 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 NPBWR2P48146 333 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 BPIFB3P59826 476 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 GMFBP60983 142 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 MEF2CQ06413 473 aaPredicted RBP10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 CRIP3Q6Q6R5 217 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 GLIPR1L1Q6UWM5 242 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 LYPD2Q6UXB3 125 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 C1orf122Q6ZSJ8 110 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 GDPD3Q7L5L3 318 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 OR2W3Q7Z3T1 314 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 OR8H2Q8N162 312 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 KIR3DL3Q8N743 410 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 C19orf18Q8NEA5 215 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 OR5T2Q8NGG2 359 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 ZNF488Q96MN9 340 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 GAFA1Q96PS6 74 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 NCOR1P1Q9H4R4 102 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 PLGRKTQ9HBL7 147 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 YAE1D1Q9NRH1 226 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 RBFOX1Q9NWB1 397 aaKnown RBP10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 OR14J1Q9UGF5 321 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 INSIG2Q9Y5U4 225 aa10.02□□□□□ -0.81
RABGGTA-215ENST00000560207 AKAP9Q99996 3911 aa10.01□□□□□ -0.81
RABGGTA-215ENST00000560207 IGHV2-70DA0A0C4DH43 119 aa10.01□□□□□ -0.81
RABGGTA-215ENST00000560207 IGKV1-12A0A0C4DH73 117 aa10.01□□□□□ -0.81
RABGGTA-215ENST00000560207 KIAA1324LA8MWY0 1029 aaPredicted RBP10.01□□□□□ -0.81
RABGGTA-215ENST00000560207 MGST3O14880 152 aa10.01□□□□□ -0.81
RABGGTA-215ENST00000560207 DEGS1O15121 323 aa10.01□□□□□ -0.81
RABGGTA-215ENST00000560207 AIREO43918 545 aa10.01□□□□□ -0.81
RABGGTA-215ENST00000560207 IGKV1D-12P01611 117 aa10.01□□□□□ -0.81
RABGGTA-215ENST00000560207 NDUFB7P17568 137 aa10.01□□□□□ -0.81
RABGGTA-215ENST00000560207 ADRA2CP18825 462 aa10.01□□□□□ -0.81
RABGGTA-215ENST00000560207 ERP29P30040 261 aaKnown RBP10.01□□□□□ -0.81
RABGGTA-215ENST00000560207 OR3A4PP47883 348 aa10.01□□□□□ -0.81
RABGGTA-215ENST00000560207 RBM11P57052 281 aaKnown RBP10.01□□□□□ -0.81
RABGGTA-215ENST00000560207 SCAND1P57086 179 aa10.01□□□□□ -0.81
RABGGTA-215ENST00000560207 LCN2P80188 198 aa10.01□□□□□ -0.81
RABGGTA-215ENST00000560207 PAX5Q02548 391 aa10.01□□□□□ -0.81
RABGGTA-215ENST00000560207 KRTAP1-1Q07627 177 aa10.01□□□□□ -0.81
RABGGTA-215ENST00000560207 BLMHQ13867 455 aa10.01□□□□□ -0.81
RABGGTA-215ENST00000560207 RBM39Q14498 530 aaKnown RBP10.01□□□□□ -0.81
RABGGTA-215ENST00000560207 INSL4Q14641 139 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms