RNA–Protein interactions for RNA: ENST00000560173.1

LDLR-211, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-211ENST00000560173 CD200R1LQ6Q8B3 271 aa7.76□□□□□ -1.17
LDLR-211ENST00000560173 BTNL3Q6UXE8 466 aa7.76□□□□□ -1.17
LDLR-211ENST00000560173 LHFPL2Q6ZUX7 228 aa7.76□□□□□ -1.17
LDLR-211ENST00000560173 SLC25A26Q70HW3 274 aa7.76□□□□□ -1.17
LDLR-211ENST00000560173 TEX29Q8N6K0 151 aa7.76□□□□□ -1.17
LDLR-211ENST00000560173 MCFD2Q8NI22 146 aa7.76□□□□□ -1.17
LDLR-211ENST00000560173 GPR148Q8TDV2 347 aa7.76□□□□□ -1.17
LDLR-211ENST00000560173 PHYHIPQ92561 330 aa7.76□□□□□ -1.17
LDLR-211ENST00000560173 AP3S1Q92572 193 aa7.76□□□□□ -1.17
LDLR-211ENST00000560173 GHSRQ92847 366 aa7.76□□□□□ -1.17
LDLR-211ENST00000560173 SDSLQ96GA7 329 aa7.76□□□□□ -1.17
LDLR-211ENST00000560173 PGLYRP3Q96LB9 341 aa7.76□□□□□ -1.17
LDLR-211ENST00000560173 NUDT16L1Q9BRJ7 211 aaKnown RBP7.76□□□□□ -1.17
LDLR-211ENST00000560173 OR51E2Q9H255 320 aa7.76□□□□□ -1.17
LDLR-211ENST00000560173 MTCH1Q9NZJ7 389 aa7.76□□□□□ -1.17
LDLR-211ENST00000560173 ZNF281Q9Y2X9 895 aa7.76□□□□□ -1.17
LDLR-211ENST00000560173 PEX16Q9Y5Y5 336 aa7.76□□□□□ -1.17
LDLR-211ENST00000560173 AUP1Q9Y679 476 aa7.76□□□□□ -1.17
LDLR-211ENST00000560173 A0A075B6Q4 140 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 TRBV5-5A0A0J9YX44 114 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 RNF212BA8MTL3 300 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 F8VVB4 439 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 F8VWA3 439 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 NDUFB3O43676 98 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 SULT1B1O43704 296 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 ECDO95905 644 aaPredicted RBP7.75□□□□□ -1.17
LDLR-211ENST00000560173 PLATP00750 562 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 IFNA2P01563 188 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 CD2P06729 351 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 OCM2P0CE71 109 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 OCMP0CE72 109 aaPredicted RBP7.75□□□□□ -1.17
LDLR-211ENST00000560173 CELP19835 753 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 GABRA2P47869 451 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 POU3F4P49335 361 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 RORCP51449 518 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 RPS11P62280 158 aaKnown RBP eCLIP7.75□□□□□ -1.17
LDLR-211ENST00000560173 IKZF1Q13422 519 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 LRRC10Q5BKY1 277 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 CRIP3Q6Q6R5 217 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 BTN2A1Q7KYR7 527 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 RNF144BQ7Z419 303 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 SERPINA12Q8IW75 414 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 BATF2Q8N1L9 274 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 OR5D14Q8NGL3 314 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 OR13C5Q8NGS8 318 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 NDNFQ8TB73 568 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 TBC1D15Q8TC07 691 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 ST8SIA4Q92187 359 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 SLAMF9Q96A28 289 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 MED30Q96HR3 178 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 CEP19Q96LK0 163 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 SPACA5Q96QH8 159 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 MRI1Q9BV20 369 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 TAS2R4Q9NYW5 299 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 RPUSD1Q9UJJ7 312 aaKnown RBP7.75□□□□□ -1.17
LDLR-211ENST00000560173 MAB21L2Q9Y586 359 aa7.75□□□□□ -1.17
LDLR-211ENST00000560173 IGKV1-12A0A0C4DH73 117 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 RFPL4AA6NLU0 287 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 RFPL4AL1F8VTS6 287 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 GPR37O15354 613 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 TMEM127O75204 238 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 GPX5O75715 221 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 RGS9O75916 674 aaPredicted RBP7.74□□□□□ -1.17
LDLR-211ENST00000560173 KNG1P01042 644 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 IGKV1D-12P01611 117 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 PPIAL4GP0DN37 164 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 RAB3AP20336 220 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 EPHA1P21709 976 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 CEBPDP49716 269 aaPredicted RBP7.74□□□□□ -1.17
LDLR-211ENST00000560173 CAV3P56539 151 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 ZP1P60852 638 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 FGF12P61328 243 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 PDZK1IP1Q13113 114 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 Q499Y3 187 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 YIF1BQ5BJH7 314 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 KLF17Q5JT82 389 aaPredicted RBP7.74□□□□□ -1.17
LDLR-211ENST00000560173 MKXQ8IYA7 352 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 Q8IYB0 196 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 CD177Q8N6Q3 437 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 LY6G5BQ8NDX9 201 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 OR51A2Q8NGJ7 313 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 NANPQ8TBE9 248 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 TMEM106AQ96A25 262 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 RFT1Q96AA3 541 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 UPRTQ96BW1 309 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 CENPOQ9BU64 300 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 SLIRPQ9GZT3 109 aaKnown RBP7.74□□□□□ -1.17
LDLR-211ENST00000560173 NXF2Q9GZY0 626 aaKnown RBP7.74□□□□□ -1.17
LDLR-211ENST00000560173 NEK6Q9HC98 313 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 TXNL4BQ9NX01 149 aaKnown RBP7.74□□□□□ -1.17
LDLR-211ENST00000560173 SLC25A10Q9UBX3 287 aaPredicted RBP7.74□□□□□ -1.17
LDLR-211ENST00000560173 METRNQ9UJH8 293 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 ANK2Q01484 3957 aa7.74□□□□□ -1.17
LDLR-211ENST00000560173 TRBV5-7A0A0A0MS05 114 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 ZNF879B4DU55 563 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 SPRY1O43609 319 aaPredicted RBP7.73□□□□□ -1.17
LDLR-211ENST00000560173 ANGPTL7O43827 346 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 ARL6IP5O75915 188 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 CYB5AP00167 134 aa7.73□□□□□ -1.17
LDLR-211ENST00000560173 LIPFP07098 398 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms