RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 ZNF146Q15072 292 aa13.92□□□□□ -0.18
RPL28-209ENST00000560055 SSX1Q16384 188 aa13.92□□□□□ -0.18
RPL28-209ENST00000560055 FAM27D1Q5T7N8 215 aa13.92□□□□□ -0.18
RPL28-209ENST00000560055 BTNL3Q6UXE8 466 aa13.92□□□□□ -0.18
RPL28-209ENST00000560055 ASCL4Q6XD76 172 aa13.92□□□□□ -0.18
RPL28-209ENST00000560055 TMEM91Q6ZNR0 172 aa13.92□□□□□ -0.18
RPL28-209ENST00000560055 C1QL2Q7Z5L3 287 aa13.92□□□□□ -0.18
RPL28-209ENST00000560055 ZNF561Q8N587 486 aa13.92□□□□□ -0.18
RPL28-209ENST00000560055 LY6G5BQ8NDX9 201 aa13.92□□□□□ -0.18
RPL28-209ENST00000560055 C8orf46Q8TAG6 207 aa13.92□□□□□ -0.18
RPL28-209ENST00000560055 NKX3-1Q99801 234 aaPredicted RBP13.92□□□□□ -0.18
RPL28-209ENST00000560055 DCTN5Q9BTE1 182 aa13.92□□□□□ -0.18
RPL28-209ENST00000560055 PPIL3Q9H2H8 161 aaKnown RBP13.92□□□□□ -0.18
RPL28-209ENST00000560055 RPUSD1Q9UJJ7 312 aaKnown RBP13.92□□□□□ -0.18
RPL28-209ENST00000560055 ZNF737O75373 536 aa13.91□□□□□ -0.18
RPL28-209ENST00000560055 LIPFP07098 398 aa13.91□□□□□ -0.18
RPL28-209ENST00000560055 UCHL1P09936 223 aa13.91□□□□□ -0.18
RPL28-209ENST00000560055 TMEM225BP0DP42 221 aa13.91□□□□□ -0.18
RPL28-209ENST00000560055 SRD5A1P18405 259 aa13.91□□□□□ -0.18
RPL28-209ENST00000560055 PSMA1P25786 263 aaKnown RBP13.91□□□□□ -0.18
RPL28-209ENST00000560055 GABRA5P31644 462 aa13.91□□□□□ -0.18
RPL28-209ENST00000560055 PTGFRP43088 359 aa13.91□□□□□ -0.18
RPL28-209ENST00000560055 OR3A4PP47883 348 aa13.91□□□□□ -0.18
RPL28-209ENST00000560055 TRAM1Q15629 374 aa13.91□□□□□ -0.18
RPL28-209ENST00000560055 ARMCX4Q5H9R4 360 aa13.91□□□□□ -0.18
RPL28-209ENST00000560055 SPIN3Q5JUX0 258 aa13.91□□□□□ -0.18
RPL28-209ENST00000560055 ELP2Q6IA86 826 aa13.91□□□□□ -0.18
RPL28-209ENST00000560055 SATL1Q86VE3 508 aa13.91□□□□□ -0.18
RPL28-209ENST00000560055 CDH26Q8IXH8 852 aa13.91□□□□□ -0.18
RPL28-209ENST00000560055 TMEM185AQ8NFB2 350 aa13.91□□□□□ -0.18
RPL28-209ENST00000560055 Q8NFD4 153 aa13.91□□□□□ -0.18
RPL28-209ENST00000560055 TNFAIP8L1Q8WVP5 186 aa13.91□□□□□ -0.18
RPL28-209ENST00000560055 TMEM203Q969S6 136 aa13.91□□□□□ -0.18
RPL28-209ENST00000560055 DMRTB1Q96MA1 342 aa13.91□□□□□ -0.18
RPL28-209ENST00000560055 GPER1Q99527 375 aa13.91□□□□□ -0.18
RPL28-209ENST00000560055 OR14J1Q9UGF5 321 aa13.91□□□□□ -0.18
RPL28-209ENST00000560055 AUP1Q9Y679 476 aa13.91□□□□□ -0.18
RPL28-209ENST00000560055 HAND1O96004 215 aa13.9□□□□□ -0.18
RPL28-209ENST00000560055 CHRM2P08172 466 aa13.9□□□□□ -0.18
RPL28-209ENST00000560055 PRKACAP17612 351 aa13.9□□□□□ -0.18
RPL28-209ENST00000560055 ADRA2CP18825 462 aa13.9□□□□□ -0.18
RPL28-209ENST00000560055 COL10A1Q03692 680 aa13.9□□□□□ -0.18
RPL28-209ENST00000560055 FIP1L1Q6UN15 594 aaKnown RBP13.9□□□□□ -0.18
RPL28-209ENST00000560055 CEACAM19Q7Z692 300 aa13.9□□□□□ -0.18
RPL28-209ENST00000560055 TEX29Q8N6K0 151 aa13.9□□□□□ -0.18
RPL28-209ENST00000560055 PNLDC1Q8NA58 520 aaKnown RBP13.9□□□□□ -0.18
RPL28-209ENST00000560055 PHYHIPQ92561 330 aa13.9□□□□□ -0.18
RPL28-209ENST00000560055 FCGR1BQ92637 280 aa13.9□□□□□ -0.18
RPL28-209ENST00000560055 MRI1Q9BV20 369 aa13.9□□□□□ -0.18
RPL28-209ENST00000560055 FAM234AQ9H0X4 552 aa13.9□□□□□ -0.18
RPL28-209ENST00000560055 NDUFB11Q9NX14 153 aa13.9□□□□□ -0.18
RPL28-209ENST00000560055 K7N7A8 449 aa13.89□□□□□ -0.19
RPL28-209ENST00000560055 RGS9O75916 674 aaPredicted RBP13.89□□□□□ -0.19
RPL28-209ENST00000560055 TK1P04183 234 aa13.89□□□□□ -0.19
RPL28-209ENST00000560055 MAS1P04201 325 aa13.89□□□□□ -0.19
RPL28-209ENST00000560055 CALCBP10092 127 aa13.89□□□□□ -0.19
RPL28-209ENST00000560055 MMP9P14780 707 aa13.89□□□□□ -0.19
RPL28-209ENST00000560055 NDUFB7P17568 137 aa13.89□□□□□ -0.19
RPL28-209ENST00000560055 DUSP1P28562 367 aa13.89□□□□□ -0.19
RPL28-209ENST00000560055 MTNR1BP49286 362 aa13.89□□□□□ -0.19
RPL28-209ENST00000560055 FGF12P61328 243 aa13.89□□□□□ -0.19
RPL28-209ENST00000560055 FABP5Q01469 135 aa13.89□□□□□ -0.19
RPL28-209ENST00000560055 HSD17B12Q53GQ0 312 aa13.89□□□□□ -0.19
RPL28-209ENST00000560055 LRRTM1Q86UE6 522 aa13.89□□□□□ -0.19
RPL28-209ENST00000560055 NKAIN3Q8N8D7 197 aa13.89□□□□□ -0.19
RPL28-209ENST00000560055 UPRTQ96BW1 309 aa13.89□□□□□ -0.19
RPL28-209ENST00000560055 FAM192AQ9GZU8 254 aa13.89□□□□□ -0.19
RPL28-209ENST00000560055 ELL3Q9HB65 397 aaPredicted RBP13.89□□□□□ -0.19
RPL28-209ENST00000560055 IL36GQ9NZH8 169 aa13.89□□□□□ -0.19
RPL28-209ENST00000560055 TRBV23-1A0A0A0MS06 115 aa13.88□□□□□ -0.19
RPL28-209ENST00000560055 TMEM82A0PJX8 343 aa13.88□□□□□ -0.19
RPL28-209ENST00000560055 MEGF11A6BM72 1044 aa13.88□□□□□ -0.19
RPL28-209ENST00000560055 CDRT1O95170 752 aa13.88□□□□□ -0.19
RPL28-209ENST00000560055 CD37P11049 281 aa13.88□□□□□ -0.19
RPL28-209ENST00000560055 SRP14P37108 136 aaKnown RBP13.88□□□□□ -0.19
RPL28-209ENST00000560055 BMXP51813 675 aa13.88□□□□□ -0.19
RPL28-209ENST00000560055 KLF17Q5JT82 389 aaPredicted RBP13.88□□□□□ -0.19
RPL28-209ENST00000560055 CD200R1LQ6Q8B3 271 aa13.88□□□□□ -0.19
RPL28-209ENST00000560055 C17orf107Q6ZR85 190 aa13.88□□□□□ -0.19
RPL28-209ENST00000560055 OR51T1Q8NGJ9 327 aa13.88□□□□□ -0.19
RPL28-209ENST00000560055 CNTD2Q9H8S5 307 aa13.88□□□□□ -0.19
RPL28-209ENST00000560055 TCF7L1Q9HCS4 588 aa13.88□□□□□ -0.19
RPL28-209ENST00000560055 GSTK1Q9Y2Q3 226 aa13.88□□□□□ -0.19
RPL28-209ENST00000560055 CCRL2O00421 344 aa13.87□□□□□ -0.19
RPL28-209ENST00000560055 PSPNO60542 156 aa13.87□□□□□ -0.19
RPL28-209ENST00000560055 TNFAIP8O95379 198 aa13.87□□□□□ -0.19
RPL28-209ENST00000560055 SRMP19623 302 aa13.87□□□□□ -0.19
RPL28-209ENST00000560055 LMO1P25800 156 aa13.87□□□□□ -0.19
RPL28-209ENST00000560055 PSMB9P28065 219 aa13.87□□□□□ -0.19
RPL28-209ENST00000560055 CAPZA1P52907 286 aa13.87□□□□□ -0.19
RPL28-209ENST00000560055 SNU13P55769 128 aaKnown RBP13.87□□□□□ -0.19
RPL28-209ENST00000560055 RSU1Q15404 277 aa13.87□□□□□ -0.19
RPL28-209ENST00000560055 SYT6Q5T7P8 510 aaPredicted RBP13.87□□□□□ -0.19
RPL28-209ENST00000560055 Q6P435 159 aa13.87□□□□□ -0.19
RPL28-209ENST00000560055 OR8H2Q8N162 312 aa13.87□□□□□ -0.19
RPL28-209ENST00000560055 JAGN1Q8N5M9 183 aa13.87□□□□□ -0.19
RPL28-209ENST00000560055 ASCC1Q8N9N2 400 aaKnown RBP13.87□□□□□ -0.19
RPL28-209ENST00000560055 OR10K1Q8NGX5 313 aa13.87□□□□□ -0.19
RPL28-209ENST00000560055 NANPQ8TBE9 248 aa13.87□□□□□ -0.19
RPL28-209ENST00000560055 H1FXQ92522 213 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms