RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.27□□□□□ -0.77
HERC1-205ENST00000559886 ZNF581Q9P0T4 197 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 HSF4Q9ULV5 492 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 KCNK7Q9Y2U2 307 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 TENM4Q6N022 2769 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 GABARAPH6UMI1 98 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 MFNGO00587 321 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 WNT9BO14905 357 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 GSTP1P09211 210 aaKnown RBP10.27□□□□□ -0.77
HERC1-205ENST00000559886 IL7P13232 177 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 GNB3P16520 340 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 GLRA1P23415 457 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 CHATP28329 748 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 DGCR2P98153 550 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 ZNF181Q2M3W8 571 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 ACP7Q6ZNF0 438 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 RTN4RL2Q86UN3 420 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 GCSAMQ8N6F7 178 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 TRAF4Q9BUZ4 470 aaPredicted RBP10.27□□□□□ -0.77
HERC1-205ENST00000559886 UBTD1Q9HAC8 227 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 ABCB10Q9NRK6 738 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 RASL12Q9NYN1 266 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 MEIOCA2RUB1 952 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 TMEM235A6NFC5 223 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 OR7C1O76099 320 aaPredicted RBP10.26□□□□□ -0.77
HERC1-205ENST00000559886 PRSS3P35030 304 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 SNU13P55769 128 aaKnown RBP10.26□□□□□ -0.77
HERC1-205ENST00000559886 GMFBP60983 142 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 TLE4Q04727 773 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 ARL6IP1Q15041 203 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 ZNF146Q15072 292 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 SPIN3Q5JUX0 258 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 FCAMRQ8WWV6 532 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 YIPF5Q969M3 257 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 THAP7Q9BT49 309 aaPredicted RBP10.26□□□□□ -0.77
HERC1-205ENST00000559886 PECRQ9BY49 303 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 RNF7Q9UBF6 113 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 ELF5Q9UKW6 265 aaPredicted RBP10.26□□□□□ -0.77
HERC1-205ENST00000559886 USP9YO00507 2555 aaPredicted RBP10.26□□□□□ -0.77
HERC1-205ENST00000559886 HELZ2Q9BYK8 2649 aaKnown RBP10.26□□□□□ -0.77
HERC1-205ENST00000559886 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.26□□□□□ -0.77
HERC1-205ENST00000559886 PDCD6O75340 191 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 COX6B1P14854 86 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 EGR1P18146 543 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 FUT3P21217 361 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 DUSP1P28562 367 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 RBMXP38159 391 aaKnown RBP10.26□□□□□ -0.77
HERC1-205ENST00000559886 HOXA4Q00056 320 aaPredicted RBP10.26□□□□□ -0.77
HERC1-205ENST00000559886 PDCD1Q15116 288 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 SMIM21Q3B7S5 101 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 FIP1L1Q6UN15 594 aaKnown RBP10.26□□□□□ -0.77
HERC1-205ENST00000559886 C6orf201Q7Z4U5 140 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 OR11L1Q8NGX0 322 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 OR52I2Q8NH67 350 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 ST8SIA4Q92187 359 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 TRIM63Q969Q1 353 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 NEDD4LQ96PU5 975 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 VRK1Q99986 396 aaPredicted RBP10.26□□□□□ -0.77
HERC1-205ENST00000559886 IFT22Q9H7X7 185 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 PLEKHJ1Q9NW61 149 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 NPTNQ9Y639 398 aa10.26□□□□□ -0.77
HERC1-205ENST00000559886 H3BUI4 141 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 SULT1C2O00338 296 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 LANCL1O43813 399 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 HPXP02790 462 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 IKZF1Q13422 519 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 PNLIPRP3Q17RR3 467 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 HACD4Q5VWC8 232 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 STEAP3Q658P3 488 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 OLFML2AQ68BL7 652 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 Q6P435 159 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 FAM90A1Q86YD7 464 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 TGIF2LYQ8IUE0 185 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 LYSMD2Q8IV50 215 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 GPX8Q8TED1 209 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 HPS1Q92902 700 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 SEH1LQ96EE3 360 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 CYYR1Q96J86 154 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 CLEC4MQ9H2X3 399 aaPredicted RBP10.25□□□□□ -0.77
HERC1-205ENST00000559886 SCPEP1Q9HB40 452 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 RCC2Q9P258 522 aaKnown RBP10.25□□□□□ -0.77
HERC1-205ENST00000559886 LAMP3Q9UQV4 416 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 PLEKHA6Q9Y2H5 1048 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 SERPINE3A8MV23 424 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 KNG1P01042 644 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 CD3GP09693 182 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 GUCA2AQ02747 115 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 RNASE12Q5GAN4 147 aaKnown RBP10.25□□□□□ -0.77
HERC1-205ENST00000559886 NKAPLQ5M9Q1 402 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 TRIQKQ629K1 86 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 RAB1BQ9H0U4 201 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 PLEKHF2Q9H8W4 249 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 SPACA1Q9HBV2 294 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 TREM2Q9NZC2 230 aa10.25□□□□□ -0.77
HERC1-205ENST00000559886 RBMX2Q9Y388 322 aaKnown RBP10.25□□□□□ -0.77
HERC1-205ENST00000559886 A0A1W2PQ09 198 aa10.24□□□□□ -0.77
HERC1-205ENST00000559886 LRRC30A6NM36 301 aa10.24□□□□□ -0.77
HERC1-205ENST00000559886 ORC5O43913 435 aa10.24□□□□□ -0.77
HERC1-205ENST00000559886 CA11O75493 328 aa10.24□□□□□ -0.77
HERC1-205ENST00000559886 LPLP06858 475 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms