RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 Q6ZPA2 131 aa14.6□□□□□ -0.07
CHRNA3-206ENST00000559658 GCSAMQ8N6F7 178 aa14.6□□□□□ -0.07
CHRNA3-206ENST00000559658 BOLLQ8N9W6 283 aaKnown RBP14.6□□□□□ -0.07
CHRNA3-206ENST00000559658 MRPS24Q96EL2 167 aaKnown RBP14.6□□□□□ -0.07
CHRNA3-206ENST00000559658 DYNLRB1Q9NP97 96 aa14.6□□□□□ -0.07
CHRNA3-206ENST00000559658 ZDHHC8Q9ULC8 765 aa14.6□□□□□ -0.07
CHRNA3-206ENST00000559658 A1L4Q6 167 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 PRSS44E7EML9 344 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 CLDN1O95832 211 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 RGS21Q2M5E4 152 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 NHLRC3Q5JS37 347 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 ATAD3CQ5T2N8 411 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 HACD4Q5VWC8 232 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 TRAPPC6BQ86SZ2 158 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 MAFIPQ8WZ33 124 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 IL19Q9UHD0 177 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 AK3Q9UIJ7 227 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 TANC2Q9HCD6 1990 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 IGHV3OR15-7A0A075B7D8 119 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 UBE2QL1A1L167 161 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 FAM221AA4D161 298 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 H7C417 338 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 CYB5R3P00387 301 aaPredicted RBP14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 LPLP06858 475 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 MELTFP08582 738 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 BPIFB2Q8N4F0 458 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 OR4S1Q8NGB4 309 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 OR4D10Q8NGI6 311 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 FBXW5Q969U6 566 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 NEDD4LQ96PU5 975 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 PLEKHJ1Q9NW61 149 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 MTFP1Q9UDX5 166 aa14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 ZNF230Q9UIE0 474 aaPredicted RBP14.59□□□□□ -0.07
CHRNA3-206ENST00000559658 AKAP6Q13023 2319 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 TACC2O95359 2948 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 TRAV24A0A0B4J272 114 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 A6NNC1 897 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 B9A039 149 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 NOS1APO75052 506 aaPredicted RBP14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 PDCD6O75340 191 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 SCGNO76038 276 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 CD8AP01732 235 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 MT-ND4P03905 459 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 ADH4P08319 380 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 BTCP35070 178 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 GATA4P43694 442 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 ASAH1Q13510 395 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 OR52W1Q6IF63 320 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 Q6P435 159 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 ACP7Q6ZNF0 438 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 GDPD3Q7L5L3 318 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 NRARPQ7Z6K4 114 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 CENPSQ8N2Z9 138 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 TOMM5Q8N4H5 51 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 OR5T2Q8NGG2 359 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 RABL2AQ9UBK7 228 aaPredicted RBP14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 OR14J1Q9UGF5 321 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 METRNQ9UJH8 293 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 RABL2BQ9UNT1 228 aa14.58□□□□□ -0.08
CHRNA3-206ENST00000559658 SIRPB1O00241 398 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 TPD52L2O43399 206 aaKnown RBP14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 TPPPO94811 219 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 CD55P08174 381 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 GSTP1P09211 210 aaKnown RBP14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 PLA2G2AP14555 144 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 GLRA1P23415 457 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 CD80P33681 288 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 RANBP1P43487 201 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 MRPS10P82664 201 aaKnown RBP14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 PCGF3Q3KNV8 242 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 CELF2-AS1Q8N7Q2 184 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 RDH5Q92781 318 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 RCC2Q9P258 522 aaKnown RBP14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 ANKRD20A5PA0PJZ0 165 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 ISPDA4D126 451 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 SRRM5B3KS81 715 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 HS3ST1O14792 307 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 LYRM1O43325 122 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 DSCAMO60469 2012 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 OR2H2O95918 312 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 HPXP02790 462 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 INPP1P49441 399 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 GNG2P59768 71 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 OXA1LQ15070 435 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 SNAPC3Q92966 411 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 FN3KRPQ9HA64 309 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 SAP30LQ9HAJ7 183 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 PCDHB16Q9NRJ7 776 aa14.57□□□□□ -0.08
CHRNA3-206ENST00000559658 USP9YO00507 2555 aaPredicted RBP14.56□□□□□ -0.08
CHRNA3-206ENST00000559658 IGKV1D-8A0A087WSZ0 117 aa14.56□□□□□ -0.08
CHRNA3-206ENST00000559658 LY6HO94772 140 aa14.56□□□□□ -0.08
CHRNA3-206ENST00000559658 DANCRP0C864 163 aa14.56□□□□□ -0.08
CHRNA3-206ENST00000559658 FUT3P21217 361 aa14.56□□□□□ -0.08
CHRNA3-206ENST00000559658 MZT1Q08AG7 82 aa14.56□□□□□ -0.08
CHRNA3-206ENST00000559658 ARFRP1Q13795 201 aa14.56□□□□□ -0.08
CHRNA3-206ENST00000559658 C11orf71Q6IPW1 123 aa14.56□□□□□ -0.08
CHRNA3-206ENST00000559658 C5orf24Q7Z6I8 188 aa14.56□□□□□ -0.08
CHRNA3-206ENST00000559658 Q8IYB0 196 aa14.56□□□□□ -0.08
CHRNA3-206ENST00000559658 SUMF2Q8NBJ7 301 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms