RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 CYB5AP00167 134 aa8.94□□□□□ -0.98
SPG11-216ENST00000559347 CHRM2P08172 466 aa8.94□□□□□ -0.98
SPG11-216ENST00000559347 RPSAP08865 295 aaKnown RBP8.94□□□□□ -0.98
SPG11-216ENST00000559347 GNAO1P09471 354 aa8.94□□□□□ -0.98
SPG11-216ENST00000559347 OCM2P0CE71 109 aa8.94□□□□□ -0.98
SPG11-216ENST00000559347 OCMP0CE72 109 aaPredicted RBP8.94□□□□□ -0.98
SPG11-216ENST00000559347 PIPP12273 146 aaPredicted RBP8.94□□□□□ -0.98
SPG11-216ENST00000559347 PRKACAP17612 351 aa8.94□□□□□ -0.98
SPG11-216ENST00000559347 CAPGP40121 348 aa8.94□□□□□ -0.98
SPG11-216ENST00000559347 RPL15P61313 204 aaKnown RBP8.94□□□□□ -0.98
SPG11-216ENST00000559347 ACSM1Q08AH1 577 aa8.94□□□□□ -0.98
SPG11-216ENST00000559347 PDZK1IP1Q13113 114 aa8.94□□□□□ -0.98
SPG11-216ENST00000559347 CCDC58Q4VC31 144 aa8.94□□□□□ -0.98
SPG11-216ENST00000559347 OR2G6Q5TZ20 316 aa8.94□□□□□ -0.98
SPG11-216ENST00000559347 TMEM200BQ69YZ2 307 aa8.94□□□□□ -0.98
SPG11-216ENST00000559347 C17orf107Q6ZR85 190 aa8.94□□□□□ -0.98
SPG11-216ENST00000559347 TCF23Q7RTU1 214 aa8.94□□□□□ -0.98
SPG11-216ENST00000559347 FAM58AQ8N1B3 248 aa8.94□□□□□ -0.98
SPG11-216ENST00000559347 C11orf42Q8N5U0 333 aa8.94□□□□□ -0.98
SPG11-216ENST00000559347 OR5D18Q8NGL1 313 aa8.94□□□□□ -0.98
SPG11-216ENST00000559347 TBC1D15Q8TC07 691 aa8.94□□□□□ -0.98
SPG11-216ENST00000559347 ZCCHC4Q9H5U6 513 aa8.94□□□□□ -0.98
SPG11-216ENST00000559347 SEBOXQ9HB31 216 aaPredicted RBP8.94□□□□□ -0.98
SPG11-216ENST00000559347 DHDHQ9UQ10 334 aa8.94□□□□□ -0.98
SPG11-216ENST00000559347 FAM96BQ9Y3D0 163 aa8.94□□□□□ -0.98
SPG11-216ENST00000559347 ANGPTL7O43827 346 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 PSPNO60542 156 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 ALX3O95076 343 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 LALBAP00709 142 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 HCKP08631 526 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 CALCBP10092 127 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 MYL12AP19105 171 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 MDKP21741 143 aaPredicted RBP8.93□□□□□ -0.98
SPG11-216ENST00000559347 SNU13P55769 128 aaKnown RBP8.93□□□□□ -0.98
SPG11-216ENST00000559347 DLX6P56179 175 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 EDDM3BP56851 147 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 ZP1P60852 638 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 RELBQ01201 579 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 ZNF146Q15072 292 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 TAF9Q16594 264 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 ASPHD2Q6ICH7 369 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 RPL22L1Q6P5R6 122 aaKnown RBP8.93□□□□□ -0.98
SPG11-216ENST00000559347 TMPRSS11AQ6ZMR5 421 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 GDPD3Q7L5L3 318 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 SERPINA12Q8IW75 414 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 C8orf59Q8N0T1 100 aaPredicted RBP8.93□□□□□ -0.98
SPG11-216ENST00000559347 DYRK2Q92630 601 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 SMIM19Q96E16 107 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 SNX22Q96L94 193 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 CHST6Q9GZX3 395 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 HMG20AQ9NP66 347 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 C1RLQ9NZP8 487 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 VPREB3Q9UKI3 123 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 EXOSC1Q9Y3B2 195 aaKnown RBP8.93□□□□□ -0.98
SPG11-216ENST00000559347 HSPE1-MOB4S4R3N1 261 aa8.93□□□□□ -0.98
SPG11-216ENST00000559347 MEX3AA1L020 520 aaKnown RBP8.92□□□□□ -0.98
SPG11-216ENST00000559347 C17orf98A8MV24 154 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 GPR137BO60478 399 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 PAHP00439 452 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 RBP4P02753 201 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 OMGP23515 440 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 GABRR1P24046 479 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 DUSP1P28562 367 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 OR3A1P47881 315 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 SOX2P48431 317 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 BMXP51813 675 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 RAG2P55895 527 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 ERVFRD-1P60508 538 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 EDDM3AQ14507 147 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 KISS1Q15726 138 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 MIDNQ504T8 468 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 LAIR2Q6ISS4 152 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 ZNF529Q6P280 563 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 ZNF782Q6ZMW2 699 aaPredicted RBP8.92□□□□□ -0.98
SPG11-216ENST00000559347 SAXO1Q8IYX7 474 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 TPRX1Q8N7U7 411 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 ZNF485Q8NCK3 441 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 OR52N4Q8NGI2 321 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 OR5D14Q8NGL3 314 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 OR52N1Q8NH53 320 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 GPR148Q8TDV2 347 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 FBLIM1Q8WUP2 373 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 C17orf50Q8WW18 174 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 TMEM80Q96HE8 168 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 AJUBAQ96IF1 538 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 ZNF747Q9BV97 191 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 DPAGT1Q9H3H5 408 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 DCLRE1BQ9H816 532 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 NEK6Q9HC98 313 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 EXOSC4Q9NPD3 245 aaKnown RBP8.92□□□□□ -0.98
SPG11-216ENST00000559347 TAS2R4Q9NYW5 299 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 CLEC2DQ9UHP7 191 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 SF3B6Q9Y3B4 125 aaKnown RBP8.92□□□□□ -0.98
SPG11-216ENST00000559347 MMP24Q9Y5R2 645 aa8.92□□□□□ -0.98
SPG11-216ENST00000559347 SIRT4Q9Y6E7 314 aaPredicted RBP8.92□□□□□ -0.98
SPG11-216ENST00000559347 VWFP04275 2813 aa8.91□□□□□ -0.98
SPG11-216ENST00000559347 hCG_1809904A0A1W2PP81 198 aa8.91□□□□□ -0.98
SPG11-216ENST00000559347 A0A1W2PPE2 198 aa8.91□□□□□ -0.98
SPG11-216ENST00000559347 A0A1W2PR64 198 aa8.91□□□□□ -0.98
SPG11-216ENST00000559347 A0A1W2PRV1 198 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms