RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 WIPF1O43516 503 aa13.8□□□□□ -0.2
LRRC28-210ENST00000558879 PSPNO60542 156 aa13.8□□□□□ -0.2
LRRC28-210ENST00000558879 IGKV1D-12P01611 117 aa13.8□□□□□ -0.2
LRRC28-210ENST00000558879 ZNF728P0DKX0 622 aa13.8□□□□□ -0.2
LRRC28-210ENST00000558879 ZNF19P17023 458 aa13.8□□□□□ -0.2
LRRC28-210ENST00000558879 COX7A1P24310 79 aa13.8□□□□□ -0.2
LRRC28-210ENST00000558879 EDDM3BP56851 147 aa13.8□□□□□ -0.2
LRRC28-210ENST00000558879 MEF2CQ06413 473 aaPredicted RBP13.8□□□□□ -0.2
LRRC28-210ENST00000558879 RAB40BQ12829 278 aa13.8□□□□□ -0.2
LRRC28-210ENST00000558879 SPIN3Q5JUX0 258 aa13.8□□□□□ -0.2
LRRC28-210ENST00000558879 ZNF626Q68DY1 528 aa13.8□□□□□ -0.2
LRRC28-210ENST00000558879 GDPD3Q7L5L3 318 aa13.8□□□□□ -0.2
LRRC28-210ENST00000558879 LHFPL3Q86UP9 236 aa13.8□□□□□ -0.2
LRRC28-210ENST00000558879 FAM58AQ8N1B3 248 aa13.8□□□□□ -0.2
LRRC28-210ENST00000558879 OR52N4Q8NGI2 321 aa13.8□□□□□ -0.2
LRRC28-210ENST00000558879 OR13C3Q8NGS6 347 aa13.8□□□□□ -0.2
LRRC28-210ENST00000558879 MRPL48Q96GC5 212 aaKnown RBP13.8□□□□□ -0.2
LRRC28-210ENST00000558879 ISG20L2Q9H9L3 353 aaKnown RBP13.8□□□□□ -0.2
LRRC28-210ENST00000558879 FAM118AQ9NWS6 357 aa13.8□□□□□ -0.2
LRRC28-210ENST00000558879 ERVK13-1Q9NX77 482 aa13.8□□□□□ -0.2
LRRC28-210ENST00000558879 LOC100130705A0A1B0GUX0 176 aa13.79□□□□□ -0.2
LRRC28-210ENST00000558879 VGLL3A8MV65 326 aa13.79□□□□□ -0.2
LRRC28-210ENST00000558879 EBAG9O00559 213 aa13.79□□□□□ -0.2
LRRC28-210ENST00000558879 INMTO95050 263 aa13.79□□□□□ -0.2
LRRC28-210ENST00000558879 IGHV1-8P0DP01 117 aa13.79□□□□□ -0.2
LRRC28-210ENST00000558879 PAX6P26367 422 aa13.79□□□□□ -0.2
LRRC28-210ENST00000558879 MTCP1P56278 107 aa13.79□□□□□ -0.2
LRRC28-210ENST00000558879 PDZK1IP1Q13113 114 aa13.79□□□□□ -0.2
LRRC28-210ENST00000558879 ASPHD2Q6ICH7 369 aa13.79□□□□□ -0.2
LRRC28-210ENST00000558879 ZBTB49Q6ZSB9 765 aa13.79□□□□□ -0.2
LRRC28-210ENST00000558879 RNF144BQ7Z419 303 aa13.79□□□□□ -0.2
LRRC28-210ENST00000558879 LHFPL4Q7Z7J7 247 aa13.79□□□□□ -0.2
LRRC28-210ENST00000558879 OR11H6Q8NGC7 330 aa13.79□□□□□ -0.2
LRRC28-210ENST00000558879 OR13C9Q8NGT0 318 aa13.79□□□□□ -0.2
LRRC28-210ENST00000558879 PIFOQ8TCI5 191 aa13.79□□□□□ -0.2
LRRC28-210ENST00000558879 Q96MT0 163 aa13.79□□□□□ -0.2
LRRC28-210ENST00000558879 ZNF714Q96N38 554 aa13.79□□□□□ -0.2
LRRC28-210ENST00000558879 MYCBPQ99417 103 aaPredicted RBP13.79□□□□□ -0.2
LRRC28-210ENST00000558879 JAM3Q9BX67 310 aa13.79□□□□□ -0.2
LRRC28-210ENST00000558879 COMMD4Q9H0A8 199 aa13.79□□□□□ -0.2
LRRC28-210ENST00000558879 PPA2Q9H2U2 334 aa13.79□□□□□ -0.2
LRRC28-210ENST00000558879 HMG20AQ9NP66 347 aa13.79□□□□□ -0.2
LRRC28-210ENST00000558879 TBL2Q9Y4P3 447 aaKnown RBP13.79□□□□□ -0.2
LRRC28-210ENST00000558879 LINC00312Q9Y6C7 94 aa13.79□□□□□ -0.2
LRRC28-210ENST00000558879 TMEM212A6NML5 194 aa13.78□□□□□ -0.2
LRRC28-210ENST00000558879 TIMM23O14925 209 aa13.78□□□□□ -0.2
LRRC28-210ENST00000558879 KDM4BO94953 1096 aa13.78□□□□□ -0.2
LRRC28-210ENST00000558879 ALX3O95076 343 aa13.78□□□□□ -0.2
LRRC28-210ENST00000558879 ZFPL1O95159 310 aa13.78□□□□□ -0.2
LRRC28-210ENST00000558879 FADS2O95864 444 aaKnown RBP13.78□□□□□ -0.2
LRRC28-210ENST00000558879 CYB5AP00167 134 aa13.78□□□□□ -0.2
LRRC28-210ENST00000558879 PRKACAP17612 351 aa13.78□□□□□ -0.2
LRRC28-210ENST00000558879 PEX2P28328 305 aa13.78□□□□□ -0.2
LRRC28-210ENST00000558879 OR3A1P47881 315 aa13.78□□□□□ -0.2
LRRC28-210ENST00000558879 MRPL28Q13084 256 aaKnown RBP13.78□□□□□ -0.2
LRRC28-210ENST00000558879 LDLRAD2Q5SZI1 272 aa13.78□□□□□ -0.2
LRRC28-210ENST00000558879 LIAT1Q6ZQX7 453 aa13.78□□□□□ -0.2
LRRC28-210ENST00000558879 DYNAPQ8N1N2 210 aa13.78□□□□□ -0.2
LRRC28-210ENST00000558879 ZNF676Q8N7Q3 588 aa13.78□□□□□ -0.2
LRRC28-210ENST00000558879 OR4S1Q8NGB4 309 aa13.78□□□□□ -0.2
LRRC28-210ENST00000558879 OR52I1Q8NGK6 324 aa13.78□□□□□ -0.2
LRRC28-210ENST00000558879 PPP1R35Q8TAP8 253 aa13.78□□□□□ -0.2
LRRC28-210ENST00000558879 RFT1Q96AA3 541 aa13.78□□□□□ -0.2
LRRC28-210ENST00000558879 RDH12Q96NR8 316 aa13.78□□□□□ -0.2
LRRC28-210ENST00000558879 SPACA5Q96QH8 159 aa13.78□□□□□ -0.2
LRRC28-210ENST00000558879 CHST6Q9GZX3 395 aa13.78□□□□□ -0.2
LRRC28-210ENST00000558879 RANBP3Q9H6Z4 567 aaPredicted RBP13.78□□□□□ -0.2
LRRC28-210ENST00000558879 AMBNQ9NP70 447 aa13.78□□□□□ -0.2
LRRC28-210ENST00000558879 FBLN5Q9UBX5 448 aa13.78□□□□□ -0.2
LRRC28-210ENST00000558879 MEX3AA1L020 520 aaKnown RBP13.77□□□□□ -0.21
LRRC28-210ENST00000558879 E9PI62 339 aa13.77□□□□□ -0.21
LRRC28-210ENST00000558879 MGST3O14880 152 aa13.77□□□□□ -0.21
LRRC28-210ENST00000558879 CHST1O43916 411 aa13.77□□□□□ -0.21
LRRC28-210ENST00000558879 WBP4O75554 376 aaKnown RBP13.77□□□□□ -0.21
LRRC28-210ENST00000558879 DUSP1P28562 367 aa13.77□□□□□ -0.21
LRRC28-210ENST00000558879 ERP29P30040 261 aaKnown RBP13.77□□□□□ -0.21
LRRC28-210ENST00000558879 ZP1P60852 638 aa13.77□□□□□ -0.21
LRRC28-210ENST00000558879 EDDM3AQ14507 147 aa13.77□□□□□ -0.21
LRRC28-210ENST00000558879 GRK1Q15835 563 aa13.77□□□□□ -0.21
LRRC28-210ENST00000558879 LY6EQ16553 131 aa13.77□□□□□ -0.21
LRRC28-210ENST00000558879 ZSCAN26Q16670 478 aa13.77□□□□□ -0.21
LRRC28-210ENST00000558879 SLC35E4Q6ICL7 350 aa13.77□□□□□ -0.21
LRRC28-210ENST00000558879 SAXO1Q8IYX7 474 aa13.77□□□□□ -0.21
LRRC28-210ENST00000558879 PARP16Q8N5Y8 322 aa13.77□□□□□ -0.21
LRRC28-210ENST00000558879 TPRX1Q8N7U7 411 aa13.77□□□□□ -0.21
LRRC28-210ENST00000558879 OR13D1Q8NGV5 346 aa13.77□□□□□ -0.21
LRRC28-210ENST00000558879 RPS4Y2Q8TD47 263 aa13.77□□□□□ -0.21
LRRC28-210ENST00000558879 FOXRED1Q96CU9 486 aaPredicted RBP13.77□□□□□ -0.21
LRRC28-210ENST00000558879 ZCCHC4Q9H5U6 513 aa13.77□□□□□ -0.21
LRRC28-210ENST00000558879 RHOFQ9HBH0 211 aa13.77□□□□□ -0.21
LRRC28-210ENST00000558879 SMPD3Q9NY59 655 aaPredicted RBP13.77□□□□□ -0.21
LRRC28-210ENST00000558879 PLXNB1O43157 2135 aa13.76□□□□□ -0.21
LRRC28-210ENST00000558879 hADV38S2A0JD32 116 aa13.76□□□□□ -0.21
LRRC28-210ENST00000558879 M0QZ24 198 aa13.76□□□□□ -0.21
LRRC28-210ENST00000558879 OR2H2O95918 312 aa13.76□□□□□ -0.21
LRRC28-210ENST00000558879 RPSAP08865 295 aaKnown RBP13.76□□□□□ -0.21
LRRC28-210ENST00000558879 CCDC159P0C7I6 412 aa13.76□□□□□ -0.21
LRRC28-210ENST00000558879 LIMS3P0CW19 117 aa13.76□□□□□ -0.21
LRRC28-210ENST00000558879 LIMS4P0CW20 117 aa13.76□□□□□ -0.21
LRRC28-210ENST00000558879 GABRR1P24046 479 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms