RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 CDK5Q00535 292 aa8.14□□□□□ -1.11
MARK3-213ENST00000558611 LOXL1Q08397 574 aaPredicted RBP8.14□□□□□ -1.11
MARK3-213ENST00000558611 GINS1Q14691 196 aa8.14□□□□□ -1.11
MARK3-213ENST00000558611 OPCMLQ14982 345 aa8.14□□□□□ -1.11
MARK3-213ENST00000558611 MOGQ16653 247 aa8.14□□□□□ -1.11
MARK3-213ENST00000558611 KRTAP27-1Q3LI81 207 aa8.14□□□□□ -1.11
MARK3-213ENST00000558611 ACSM5Q6NUN0 579 aa8.14□□□□□ -1.11
MARK3-213ENST00000558611 Q71RC1 249 aaPredicted RBP8.14□□□□□ -1.11
MARK3-213ENST00000558611 HIPK1Q86Z02 1210 aa8.14□□□□□ -1.11
MARK3-213ENST00000558611 ZNF786Q8N393 782 aa8.14□□□□□ -1.11
MARK3-213ENST00000558611 PARP8Q8N3A8 854 aa8.14□□□□□ -1.11
MARK3-213ENST00000558611 MAPKAPK5-AS1Q8N8E1 139 aa8.14□□□□□ -1.11
MARK3-213ENST00000558611 OR6K6Q8NGW6 343 aa8.14□□□□□ -1.11
MARK3-213ENST00000558611 OR4A16Q8NH70 328 aa8.14□□□□□ -1.11
MARK3-213ENST00000558611 OR5K1Q8NHB7 308 aa8.14□□□□□ -1.11
MARK3-213ENST00000558611 GTF3AQ92664 365 aaKnown RBP8.14□□□□□ -1.11
MARK3-213ENST00000558611 LGALS12Q96DT0 336 aa8.14□□□□□ -1.11
MARK3-213ENST00000558611 PITX2Q99697 317 aa8.14□□□□□ -1.11
MARK3-213ENST00000558611 ASCL2Q99929 193 aa8.14□□□□□ -1.11
MARK3-213ENST00000558611 ATF6BQ99941 703 aa8.14□□□□□ -1.11
MARK3-213ENST00000558611 HCAR1Q9BXC0 346 aa8.14□□□□□ -1.11
MARK3-213ENST00000558611 GABARAPL1Q9H0R8 117 aa8.14□□□□□ -1.11
MARK3-213ENST00000558611 MED20Q9H944 212 aa8.14□□□□□ -1.11
MARK3-213ENST00000558611 SLC25A19Q9HC21 320 aa8.14□□□□□ -1.11
MARK3-213ENST00000558611 TUBG2Q9NRH3 451 aa8.14□□□□□ -1.11
MARK3-213ENST00000558611 FAM212BQ9NTI7 297 aaPredicted RBP8.14□□□□□ -1.11
MARK3-213ENST00000558611 SVEP1Q4LDE5 3571 aa8.14□□□□□ -1.11
MARK3-213ENST00000558611 NAV3Q8IVL0 2385 aa8.13□□□□□ -1.11
MARK3-213ENST00000558611 PLSCR5A0PG75 271 aa8.13□□□□□ -1.11
MARK3-213ENST00000558611 F8WDY8 70 aa8.13□□□□□ -1.11
MARK3-213ENST00000558611 G3V2T6 193 aa8.13□□□□□ -1.11
MARK3-213ENST00000558611 CCL24O00175 119 aa8.13□□□□□ -1.11
MARK3-213ENST00000558611 SURF4O15260 269 aa8.13□□□□□ -1.11
MARK3-213ENST00000558611 DIRAS3O95661 229 aa8.13□□□□□ -1.11
MARK3-213ENST00000558611 HMGN1P05114 100 aa8.13□□□□□ -1.11
MARK3-213ENST00000558611 PAICSP22234 425 aaKnown RBP8.13□□□□□ -1.11
MARK3-213ENST00000558611 USF1P22415 310 aaPredicted RBP8.13□□□□□ -1.11
MARK3-213ENST00000558611 RPS27P42677 84 aaKnown RBP8.13□□□□□ -1.11
MARK3-213ENST00000558611 DAPP51397 102 aa8.13□□□□□ -1.11
MARK3-213ENST00000558611 FUT6P51993 359 aa8.13□□□□□ -1.11
MARK3-213ENST00000558611 BLVRAP53004 296 aa8.13□□□□□ -1.11
MARK3-213ENST00000558611 ECH1Q13011 328 aa8.13□□□□□ -1.11
MARK3-213ENST00000558611 PCK2Q16822 640 aa8.13□□□□□ -1.11
MARK3-213ENST00000558611 TMEM249Q2WGJ8 235 aa8.13□□□□□ -1.11
MARK3-213ENST00000558611 LINC01590Q5TEZ4 76 aa8.13□□□□□ -1.11
MARK3-213ENST00000558611 DCXRQ7Z4W1 244 aa8.13□□□□□ -1.11
MARK3-213ENST00000558611 APOBEC3DQ96AK3 386 aaPredicted RBP8.13□□□□□ -1.11
MARK3-213ENST00000558611 BPESC1Q9GZL8 116 aa8.13□□□□□ -1.11
MARK3-213ENST00000558611 C5orf66Q9H5L9 145 aa8.13□□□□□ -1.11
MARK3-213ENST00000558611 WDR76Q9H967 626 aa8.13□□□□□ -1.11
MARK3-213ENST00000558611 DDX28Q9NUL7 540 aaKnown RBP8.13□□□□□ -1.11
MARK3-213ENST00000558611 PTTG2Q9NZH5 202 aa8.13□□□□□ -1.11
MARK3-213ENST00000558611 STARD10Q9Y365 291 aa8.13□□□□□ -1.11
MARK3-213ENST00000558611 CUBNO60494 3623 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 WNK2Q9Y3S1 2297 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 ZSCAN5BA6NJL1 495 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 PRR23D1E9PI22 279 aaPredicted RBP8.12□□□□□ -1.11
MARK3-213ENST00000558611 F5H5K5 113 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 LYNX1G3V0Z9 82 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 CD5LO43866 347 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 TIMM8AO60220 97 aaPredicted RBP8.12□□□□□ -1.11
MARK3-213ENST00000558611 IGHV1-46P01743 117 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 ACSM4P0C7M7 580 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 PRR23D2P0DMB1 279 aaPredicted RBP8.12□□□□□ -1.11
MARK3-213ENST00000558611 LYNX1P0DP58 116 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 KITLGP21583 273 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 CRISP1P54107 249 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 ACTR3P61158 418 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 SSTP61278 116 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 ESRRGP62508 458 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 CCL8P80075 99 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 MRPS11P82912 194 aaKnown RBP8.12□□□□□ -1.11
MARK3-213ENST00000558611 PSG7Q13046 419 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 GGTLC2Q14390 218 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 RSPO1Q2MKA7 263 aaPredicted RBP8.12□□□□□ -1.11
MARK3-213ENST00000558611 TEX30Q5JUR7 227 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 TMEM236Q5W0B7 351 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 FBXW12Q6X9E4 464 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 OR56B1Q8NGI3 324 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 OR5L1Q8NGL2 311 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 PYDC1Q8WXC3 89 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 RDH5Q92781 318 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 YIPF5Q969M3 257 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 PLEKHA8Q96JA3 519 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 MARCH7Q9H992 704 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 PTTG3PQ9NZH4 202 aa8.12□□□□□ -1.11
MARK3-213ENST00000558611 PURGQ9UJV8 347 aaKnown RBP8.12□□□□□ -1.11
MARK3-213ENST00000558611 MXRA5Q9NR99 2828 aa8.11□□□□□ -1.11
MARK3-213ENST00000558611 IGHV4-61A0A0C4DH41 118 aa8.11□□□□□ -1.11
MARK3-213ENST00000558611 TRIM64CA6NLI5 447 aa8.11□□□□□ -1.11
MARK3-213ENST00000558611 ZNF878C9JN71 531 aa8.11□□□□□ -1.11
MARK3-213ENST00000558611 M0R135 149 aa8.11□□□□□ -1.11
MARK3-213ENST00000558611 ZNF593O00488 134 aaPredicted RBP8.11□□□□□ -1.11
MARK3-213ENST00000558611 CLN5O75503 358 aa8.11□□□□□ -1.11
MARK3-213ENST00000558611 RP2O75695 350 aa8.11□□□□□ -1.11
MARK3-213ENST00000558611 SLPIP03973 132 aa8.11□□□□□ -1.11
MARK3-213ENST00000558611 TACSTD2P09758 323 aa8.11□□□□□ -1.11
MARK3-213ENST00000558611 IGHV4-31P0DP07 118 aa8.11□□□□□ -1.11
MARK3-213ENST00000558611 SLC2A5P22732 501 aa8.11□□□□□ -1.11
MARK3-213ENST00000558611 COL8A2P25067 703 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms