RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 OR5AC2Q9NZP5 309 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 SHANK1Q9Y566 2161 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 KANTRA0A1W2PQU2 76 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 MSGN1A6NI15 193 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 CEACAM18A8MTB9 384 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 B3GALNT1O75752 331 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 RRASP10301 218 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 HLA-GP17693 338 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 PSMB6P28072 239 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 FCGR2CP31995 323 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 SRSF4Q08170 494 aaKnown RBP9.07□□□□□ -0.96
TPM1-210ENST00000558264 ARL6IP1Q15041 203 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 PXT1Q8NFP0 134 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 OR5T2Q8NGG2 359 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 OR11L1Q8NGX0 322 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 OR6K3Q8NGY3 331 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 NEK7Q8TDX7 302 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 SCARB1Q8WTV0 552 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 GPHA2Q96T91 129 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 HSF4Q9ULV5 492 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 LGALS8O00214 317 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 SELEP16581 610 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 PIGPP57054 158 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 RAB32Q13637 225 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 SLC51BQ86UW2 128 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 TMEM200AQ86VY9 491 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 KCNRGQ8N5I3 272 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 BCL2L2Q92843 193 aaPredicted RBP9.06□□□□□ -0.96
TPM1-210ENST00000558264 EXTL1Q92935 676 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 RNF126Q9BV68 326 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 RNF122Q9H9V4 155 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 NECAP2Q9NVZ3 263 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 LUZP4Q9P127 313 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 AUP1Q9Y679 476 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 A0A0B4J2A0 478 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 F5H0A9 414 aaPredicted RBP9.06□□□□□ -0.96
TPM1-210ENST00000558264 RHBDL1O75783 438 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 PDGFAP04085 211 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 SLC25A4P12235 298 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 PRKACAP17612 351 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 HOXA4Q00056 320 aaPredicted RBP9.06□□□□□ -0.96
TPM1-210ENST00000558264 IKZF1Q13422 519 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 CEACAM21Q3KPI0 293 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.06□□□□□ -0.96
TPM1-210ENST00000558264 INO80EQ8NBZ0 244 aaPredicted RBP9.06□□□□□ -0.96
TPM1-210ENST00000558264 OR5L1Q8NGL2 311 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 SCGB3A2Q96PL1 93 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 C12orf4Q9NQ89 552 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 SHPKQ9UHJ6 478 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 CACNA1GO43497 2377 aa9.06□□□□□ -0.96
TPM1-210ENST00000558264 SIGLEC5O15389 551 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 BCL2L11O43521 198 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 AGFG2O95081 481 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 IFNA2P01563 188 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 FUT3P21217 361 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 IGHV1-2P23083 117 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 CALCRP30988 508 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 ESPL1Q14674 2120 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 ALKBH6Q3KRA9 238 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 RTL6Q6ICC9 239 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 ALKBH2Q6NS38 261 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 TMEM65Q6PI78 240 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 ACOT7LQ6ZUV0 252 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 ASB13Q8WXK3 278 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 HIST1H2AAQ96QV6 131 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 SDHAF2Q9NX18 166 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 ATPIF1Q9UII2 106 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 A0A0D9SG52 128 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 hCG_1807616A0A1W2PRN6 198 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 HS3ST1O14792 307 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 BET1O15155 118 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 CA11O75493 328 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 SCGB1D2O95969 90 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 ZNF728P0DKX0 622 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 TCF15Q12870 199 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 PPA1Q15181 289 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 VWA1Q6PCB0 445 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 OR1S1Q8NH92 325 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 RDH5Q92781 318 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 RBPMSQ93062 196 aaKnown RBP9.05□□□□□ -0.96
TPM1-210ENST00000558264 MRPL24Q96A35 216 aaKnown RBP9.05□□□□□ -0.96
TPM1-210ENST00000558264 ZNF286AQ9HBT8 521 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 RAB18Q9NP72 206 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 IL36GQ9NZH8 169 aa9.05□□□□□ -0.96
TPM1-210ENST00000558264 CEP250Q9BV73 2442 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 ANKRD30BLA7E2S9 258 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 TRAPPC2LH3BP13 241 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 SS18L1O75177 396 aaPredicted RBP9.04□□□□□ -0.96
TPM1-210ENST00000558264 OR2F2O95006 317 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 OR5AC1P0C628 307 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 COX5BP10606 129 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 AADACP22760 399 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 DTYMKP23919 212 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 FOXF2Q12947 444 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 OR2F1Q13607 317 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 RBM39Q14498 530 aaKnown RBP9.04□□□□□ -0.96
TPM1-210ENST00000558264 ABCA11PQ4W5N1 156 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 RGS7BPQ6MZT1 257 aaPredicted RBP9.04□□□□□ -0.96
TPM1-210ENST00000558264 TFAP2EQ6VUC0 442 aa9.04□□□□□ -0.96
TPM1-210ENST00000558264 CCDC28AQ8IWP9 274 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms